| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4537549 = | NA (NA) | 15 (0.260) | 6/254 | NT | 69.0% | coding (884/1533 nt) | PP_4025 | transposase |
| ? | NC_002947 | = 4626656 | 7 (0.120) | coding (848/1533 nt) | PP_4091 | transposase | |||||
CCGCTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAATTTACGCCGGACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCT‑‑‑ccagc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4537696‑4537549‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCAGCCGCGCGCAGGAGGTGCCGCTGCGCCTGCTGGAGGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCATGTTCGGCGTAAATTCGTCGAAG < NC_002947/4626656‑4626504 CCGCTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAATTTACGCCGGACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCT‑‑‑C > 7:104891/1‑149CCGCTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAATTTACGCCGGACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCT‑‑‑C > 4:189062/1‑149 CGCTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAATTTACGCCGGACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCT‑‑‑C > 2:338281/1‑148 CGCTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAATTTACGCCGGACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCT‑‑‑C > 3:237117/1‑148 CGCTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAATTTACGCCGGACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCT‑‑‑C > 6:165549/1‑148 GCTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACTAATTTACGCCGGACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCT‑‑‑CCA < 5:288906/149‑1 GCTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAATTTACGCCGGACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCT‑‑‑CCA < 5:189926/149‑1 GCTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAATTTACGCCGGACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCT‑‑‑CCA < 4:237117/149‑1 TCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAATTTACGCCGGACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCT‑‑‑CCAG > 7:292813/1‑148 TCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAATTTACGCCGGACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCT‑‑‑CCAG > 3:327574/1‑148 TCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAATTTACGCCGGACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCT‑‑‑C > 8:312685/1‑145 TCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAATTTACGCCGGACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCT‑‑‑C < 7:312685/145‑1 CCTTAGGCTGCACCTTCTGCGCTTCGACGAATTTACGCCGGACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCT‑‑‑CCA > 3:335230/1‑141 CCTTAGGCTGCACCTTCTGCGCTTCGACGAATTTACGCCGGACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCT‑‑‑CCA < 4:335230/141‑1 CGACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCT‑‑‑CCAGCCGCGCGCAGGAGGTGCCGCTGCGCCTGC < 1:91252/147‑1 GACGAATTTACGCCGGACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCT‑‑‑CCAGCCGCGCGCAGGAGGTGCCGCTGCGCCTGCTGG < 6:367267/149‑1 GACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCACCAGCCGCGCGCAGGAGGTGCCGCTGCGCCTGC < 5:115850/149‑1 ACGAATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCTGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCT‑‑‑CCAGCCGCGCGCAGGAGGTGCCGCTGCGCCTGCTGGA < 4:86943/149‑1 GAATTTACGCCGGACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCT‑‑‑CCAGCCGCGCGCAGGAGGTGCCGCTGCGCCTGCTGGAGG < 5:350345/149‑1 GAATTTACGCCGGACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCT‑‑‑CCAGCCGCGCGCAGGAGGTGCCGCTGCGCCTGCTGGAGG < 7:225759/149‑1 AATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCACCAGCCGCGCGCAGGAGGTGCCGCTGCGCCTGCTGGA < 5:121731/149‑1 AATTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCACCAGCCGCGCGCAGGAGGTGCCGCTGCGCCTGCTGGA < 5:116455/149‑1 ATTTACGCCGGACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCA‑‑‑CCAGCCGCGCGCAGGAGGTGCCGCTGCGCCTGCTGGAGGGC < 6:322952/149‑1 TTTACGCCGGACATGCGACATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCACCAGCCGCGCGCAGGAGGTGCCGCTGCGCCTGCTGGAGG < 2:125445/149‑1 TACGCCGGACATGCGCCATGCACGCCAGTCGTTCCACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCACCAGCCGCGCGCAGGAGGTGCCGCTGCGCCTGCTGGAGGG < 4:195160/148‑1 TAATCATCGGTCATCACGTAACCGCGATAGCCCT‑‑‑CCAGCCGCGCGCAGGAGGTGCCGCTGCGCCTGCTGGA < 1:74468/71‑1 TAATCATCGGTCATCACGTAACCGCGATAGCCCT‑‑‑CCAGCCGCGCGCAGGAGGTGCCGCTGCGCCTGCTGGA > 2:74468/1‑71 TCATCGGTCATCACGTAACCGCGATAGCCCTCCACCAGCCGCGCGCAGGAGGTGCCGCTGCGCCTGCT > 8:9593/1‑68 TCATCGGTCATCACGTAACCGCGATAGCCCTCCACCAGCCGCGCGCAGGAGGTGCCGCTGCGCCTGCT < 7:9593/68‑1 CCAGCCGCGCGCAGGAGGTGCCGCTGCGCCTGCTGGAGGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCATGTTCGGCGTAAATTCGTC < 5:186841/149‑1 AGCCGCGCGCAGGAGGTGCCGCTGCGCCTGCTGGAGGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCATGTTCGGCGTAAATTCGT < 6:49595/146‑1 AGCCGCGCGCAGGAGGTGCCGCTGCGCCTGCTGGAGGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCATGTTCGGCGTAAATTCGT > 5:49595/1‑146 GCCGCGCGCAGGAGGTGCCGCTGCGCCTGCTGGAGGGCTATCGCGGTTACGTGATGACCGATGATTACACCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCATGTTCGGCGTAAATTCGTCGAA < 6:8855/149‑1 CCGCGCGCAGGAGGTGCCGCTGCGCCTGCTGGAGGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCATGTTCGGCGTAAATTCGTCGAAG > 3:13855/1‑149 CCGCTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAATTTACGCCGGACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCT‑‑‑ccagc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4537696‑4537549‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCAGCCGCGCGCAGGAGGTGCCGCTGCGCCTGCTGGAGGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCATGTTCGGCGTAAATTCGTCGAAG < NC_002947/4626656‑4626504 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |