New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4738166 =	60 (1.000)	3 (0.050)	3/252	NT	5.2%	coding (204/1773 nt)	sdhA	succinate dehydrogenase flavoprotein subunit
	?	NC_002947	4738204 =	52 (0.900)					coding (166/1773 nt)	sdhA	succinate dehydrogenase flavoprotein subunit

CCTGCGCCATCGCTTCGGCCGACCCGAACGACGACTGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4738206‑4738166 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgcAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCGGGAAGACCTTGGTGACTACGGCAGTCTTGTGGCCGCCTTGAGCCAGTTGCAGCGCTGCGCGCATGCC  >  NC_002947/4738204‑4738312                                                                                                                                                        CCTGCGCCATCGCTTCGGCCGACCCGAACGACGACTGGCGCAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCGGGAAGACCTTGGTGACTACGGCAGTCTTGTGGCCGCCTTGAGCCAGTTGCA                  >  1:326117/1‑134 CCTGCGCCATCGCTTCGGCCGACCCGAACGACGACTGGCGCAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCGGGAAGACCTTGGTGACTACGGCAGTCTTGTGGCCGCCTTGAGCCAGTTGCA                  <  2:326117/134‑1  CTGCGCCATCGCTTCGGCCGACCCGAACGACGACTGGCGCAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCGGGAAGACCTTGGTGACTACGGCAGTCTTGTGGCCGCCTTGAGCCAGTTGCAGCGCTGCGCGCATGCC  >  5:267286/1‑149                                        GCAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCGGGAAGACCTTGGTGACTACGGCAGTCTTGTGGCCGCCTTGA                            >  5:315333/1‑85                                        GCAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCGGGAAGACCTTGGTGACTACGGCAGTCTTGTGGCCGCCTTGA                            <  6:315333/85‑1                                                                                                                                                        CCTGCGCCATCGCTTCGGCCGACCCGAACGACGACTGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4738206‑4738166 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgcAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCGGGAAGACCTTGGTGACTACGGCAGTCTTGTGGCCGCCTTGAGCCAGTTGCAGCGCTGCGCGCATGCC  >  NC_002947/4738204‑4738312

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.