New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 4738166 =60 (1.000)3 (0.050) 3/252 NT 5.2% coding (204/1773 nt) sdhA succinate dehydrogenase flavoprotein subunit
?NC_002947 4738204 = 52 (0.900)coding (166/1773 nt) sdhA succinate dehydrogenase flavoprotein subunit

CCATGTGGTCCAGTTCGAAGACCGCAGCCGGGCCTTCCTGACACATGTATTCGATAGCGTCCTGGTCACCGATGTAGTCGGAACCCTTGACGGTATCGTACATGTGCCAGCGCCAGTCGTCGTTCGGGTCGGCCGA‑‑AGCGATGGCGCAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCGGGAAGACCTTGGTGACTACGGCAGTCTTGTGGCCGCCTTGAGCCAGTTGCAGCGCTGCGCGCATGCCGGCGCCGCCGCCACCGATGATGATGGCGTCGAA  >  NC_002947/4738057‑4738345
                                                                                                                                                     |                                                                                                                                             
ggcatgcgcgcagcgctgcaactggctcaaggcggccacaagactgccgtagtcaccaaggtcttcccgacccgttcgcacaccgtatccgcccagggcggcatcacctGCGCCAGTCGTCGTTCGGGTCGGCCGA‑‑AGCGATGGCGCAg                                                                                                                                              >  5:267286‑M1/110‑149 (MQ=255)
ccATGTGGTCCAGTTCGAAGACCGCAGCCGGGCCTTCCTGACACATGTATTCGATAGCGTCCTGGTCACCGATGTAGTCGGAACCCTTGACGGTATCGTACATGTGCCAGCGCCAGTCGTCGTTCGGGGCGGCCGA‑‑AGCGATGGCGCAg                                                                                                                                              <  5:307348/149‑1 (MQ=255)
     tgGTCCAGTTCGAAGACCGCAGCCGGGCCTTCCTGACACATGTATTCGATAGCGTCCTGGTCACCGATGTAGTCGGAACCCTTGACGGTATCGTACATGTGCCAGCGCCAGTCGTCGTTCGGGTCGGCCGA‑‑AGCGATGGCGCAGGTGa                                                                                                                                          <  8:30141/148‑1 (MQ=255)
      ggTCCAGTTCGAAGACCGCAGCCGGGCCTTCCTGACACATGTATTCGATAGCGTCCTGGTCACCGATGTAGTCGGAACCCTTGACGGTATCGTACATGTGCCAGCGCCAGTCGTCGTTCGGGTCGGCCGA‑‑AGCGATGGCGCAGGTGATg                                                                                                                                        >  1:64130/1‑149 (MQ=255)
       gTCCAGTTCGAAGACCGCAGCCGGGCCTTCCTGACACATGTATACGATAGCGTCCTGGTCACCGATGTAGTCGGAACCCTTGACGGTATCGTACATGTGCCAGCGCCAGTCGTCGTTCGGGTCGGCCGA‑‑AGCGATGGCGCAGGTGATgc                                                                                                                                       <  6:210226/149‑1 (MQ=255)
         ccAGTTCGAAGACCGCAGCCGGGCCTTCCTGACACATGTATTCGATAGCGTCCTGGTCACCGATGTAGTCGGAACCCTTGACGGTATCGTACATGTGCCAGCGCCAGTCGTCATTCGGGTCGGCCGA‑‑AGCGATGGCGCAGGTGATgccg                                                                                                                                     >  7:260472/1‑149 (MQ=255)
           aGTTCGAAGACCGCAGCCGGGCCTTCCTGACACATGTATTCGATAGCGTCCTGGTCACCGATGTAGTCGGAACCCTTGACGGTATCGTACATGTGCCAGCGCCAGTCGTCGTTCGGGTCGGCCGA‑‑AGCGATGGCGCAGGTGATgccgcc                                                                                                                                   <  2:11054/149‑1 (MQ=255)
                tgcaactggctcaaggcggccacaagactgccgtagtcaccaaggtcttcccgacccgttcgcacaccgtatccgcccagggcggcatcacctGCGCCAGTCGTCGTTCGGGTCGGCCGA‑‑AGCGATGGCGCAgg                                                                                                                                             >  1:326117‑M1/94‑134 (MQ=255)
                tgcaactggctcaaggcggccacaagactgccgtagtcaccaaggtcttcccgacccgttcgcacaccgtatccgcccagggcggcatcacctGCGCCAGTCGTCGTTCGGGTCGGCCGA‑‑AGCGATGGCGCAgg                                                                                                                                             <  2:326117‑M1/41‑1 (MQ=255)
                 aaGACCGCAGCCGGGCCTTCCTGACACATGTATTCGATAGCGTCCTGGTCACCGATGTAGTCGGAACCCTTGACGGTATCGTACATGTGCCAGCGCCAGTCGTCGTTCGGGTCGGCCGA‑‑AGCGATGGCGCAGGTGATGCCGCCCTGGGc                                                                                                                             <  7:77859/149‑1 (MQ=255)
                  aGACCGCAGCCGGGCCTTCCTGACACATGTATTCGATAGCGTCCTGGTCACCGATGTAGTCGGAACCCTTGACGGTATCGTACATGTGCCAGCGCCAGTCGTCGTTCGGGTCGGCCGA‑‑AGCGATGGCGCAGGTGATGCCGCCCTGGGCg                                                                                                                            >  4:120787/1‑149 (MQ=255)
                      cGCAGCCGGGCCTTCCTGACACATGTATTCGATAGCGTCCTGGTCACCGATGTAGTCGGAACCCTTGACGGTATCGTACATGTGCCAGCGCCAGTCGTCGTTCGGGTCGGCCGA‑‑AGCGATGGCGCAGGTGATGCCGCCCTGGGCGGATa                                                                                                                        >  6:61535/1‑149 (MQ=255)
                                 cTTCCTGACACATGTATTCGATAGCGTCCTGGTCACCGATGTAGTCGGAACCCTTGACGGTATCGTACATGTGCCAGCGCCAGTCGTCGTTCGGGTCGGCCGA‑‑AGCGATGGCGCAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGaa                                                                                                             <  2:64130/149‑1 (MQ=255)
                                         cacaTGTATTCGATAGCGTCCTGGTCACCGATGTAGTCGGAACCCTTGACGGTTTCGTACATGTGCCAGCGCCAGTCGTCGTTCGGGTCGGCCGA‑‑AGCGATGGCGCAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGTTCgg                                                                                                     <  4:195937/149‑1 (MQ=255)
                                         cacaTGTATTCGATAGCGTCCTGGTCACCGATGTAGTCGGAACCCTTGACGGTATCGTACATGTGCCAGCGCCAGTCGTCGTTCGGGTCGGCCGA‑‑AGCGATGGCGCAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCgg                                                                                                     <  5:61535/149‑1 (MQ=255)
                                          acaTGTATTCGATAGCGTCCTGGTCACCGATGTAGTCGGAACCCTTGACGGTATCGTACATGTGCCAGCGCCAGTCGTCGTTCGGGTCGGCCGA‑‑AGCGATGGCGCAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCggg                                                                                                    <  5:336000/149‑1 (MQ=255)
                                          acaTGTATTCGATAGCGTCCTGGTCACCGATGTAGTCGGAACCCTTGACGGTATCGTACATGTGCCAGCGCCAGTCGTCGTTCGGGTCGGCCGA‑‑AGCGATGGCGCAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCgg                                                                                                     >  8:340582/1‑148 (MQ=255)
                                           caTGTATTCGATAGCGTCCTGGTCACCGATGTAGTCGGAACCCTTGACGGTATCGTACATGTGCCAGCGCCAGTCGTCATTCGGGTCGGCCGA‑‑AGCGATGGCGCAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCGGGa                                                                                                   <  8:260472/149‑1 (MQ=255)
                                             tGTATTCGATAGCGTCCTGGTCACCGATGTAGTCGGAACCCTTGACGGTATCGTACATGTGCCAGCGCCAGTCGTCGTTCGGGTCGGCCGA‑‑AGCGATGGCGCAGGTGATgccgcc                                                                                                                                   >  3:126370/1‑115 (MQ=255)
                                             tGTATTCGATAGCGTCCTGGTCACCGATGTAGTCGGAACCCTTGACGGTATCGTACATGTGCCAGCGCCAGTCGTCGTTCGGGTCGGCCGA‑‑AGCGATGGCGCAGGTGATgccgcc                                                                                                                                   <  4:126370/115‑1 (MQ=255)
                                                aTTCGATAGCGTCCTGGTCACCGATGTAGTCGGAACCCTTGACGGTATCGTACATGTGCCAGCGCCAGTCGTCGTTCGGGTCGGCCGA‑‑AGCGATGGCGCAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGt                                                                                                        <  7:224130/139‑1 (MQ=255)
                                                aTTCGATAGCGTCCTGGTCACCGATGTAGTCGGAACCCTTGACGGTATCGTACATGTGCCAGCGCCAGTCGTCGTTCGGGTCGGCCGA‑‑AGCGATGGCGCAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGt                                                                                                        >  8:224130/1‑139 (MQ=255)
                                                aTTCGATAGCGTCCTGGTCACCGATGTAGTCGGAACCCTTGACGGTATCGTACATGTGCCAGCGCCAGTCGTCGTTCGGGTCGGCCGA‑‑AGCGATGGCGCAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCGGGAAGAcc                                                                                              >  3:309893/1‑149 (MQ=255)
                                                    gATAGCGTCCTGGTCACCGATGTAGTCGGAACCCTTGACGGTATCGTACATGTGCCAGCGCCAGTCGTCGTTCGGGTCGGCCGA‑‑AGCGATGGCGCAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCGGGAAGACCTTg                                                                                           <  7:82501/148‑1 (MQ=255)
                                                     aTAGCGTCCTGGTCACCGATGTAGTCGGAACCCTTGACGGTATCGTACATGTGCCAGCGCCAGTCGTCGTTCGGGTCGGCCGA‑‑AGCGATGGCGCAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCGGGAAGACCTTGGt                                                                                         <  3:120787/149‑1 (MQ=255)
                                                          gTCCTGGTCACCGATGTAGTCGGAACCCTTGACGGTATCGTACATGTGCCAGCGCCAGTCGTCGTTCGGGTCGGCCGA‑‑AGCGATGGCGCAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCGGGAAGACCTTGGTGACtt                                                                                    >  6:167535/1‑148 (MQ=255)
                                                            ccTGGTCACCGATGTAGTCGGAACCCTTGACGGTATCGTACATGTGCCAGCGCCAGTCGTCGTTCGGGTCGGCCGA‑‑AGCGATGGCGCAGGTGATGCCGCCCTGGGCGGATACgg                                                                                                                     <  4:270470/114‑1 (MQ=255)
                                                            ccTGGTCACCGATGTAGTCGGAACCCTTGACGGTATCGTACATGTGCCAGCGCCAGTCGTCGTTCGGGTCGGCCGA‑‑AGCGATGGCGCAGGTGATGCCGCCCTGGGCGGATACgg                                                                                                                     >  3:270470/1‑114 (MQ=255)
                                                                  cACCGATGTAGTCGGAACCCTTGACGGTATCGTACTTGTGCCAGCGCCAGTCGTCGTTCGGGGCGGCCGA‑‑AGCGATGGCGCAGGTGATGCCGCCCTGGGc                                                                                                                             <  3:88877/100‑1 (MQ=255)
                                                                     cGATGTAGTCGGAACCCTTGACGGTATCGTACATGTGCCAGCGCCAGTCGTCGTTCGGGTCGGCCGA‑‑AGCGATGGCGCAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCGGGAAGACCTTGGTGACTACGGCAGTCTtg                                                                         >  1:150171/1‑149 (MQ=255)
                                                                       aTGTAGTCGGAACCCTTGACGGTATCGTACATGTGCCAGCGCCAGTCGTCGTTCGGGTCGGCCGA‑‑AGCGATGGCGCAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCgg                                                                                                     <  8:335270/119‑1 (MQ=255)
                                                                       aTGTAGTCGGAACCCTTGACGGTATCGTACATGTGCCAGCGCCAGTCGTCGTTCGGGTCGGCCGA‑‑AGCGATGGCGCAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCgg                                                                                                     >  7:335270/1‑119 (MQ=255)
                                                                       aTGTAGTCGGAACCCTTGACGGTATCGTACATGTGCCAGCGCCAGTCGTCGTTCGGGTCGGCCGA‑‑AGCGATGGCGCAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCGGGAAGACCTTGGTGACTACGGCAGTCTtgtg                                                                       <  6:374472/149‑1 (MQ=255)
                                                                          tAGTCGGAACCCTTGACGGTATCGTACATGTGCCAGCGCCAGTCGTCGTTCGGGTCGGCCGA‑‑AGCGATGGCGCAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCGGGAAGACCTTGGTGACTACGGCAGTCTTGTGgcc                                                                    >  2:20568/1‑149 (MQ=255)
                                                                           aGTCGGAACCCTTGACGGTATCGTACATGTGCCAGCGCCAGTCGTCGTTCGGGTCGGCCGA‑‑AGCGATGGCGCAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCGGGAAGACCTTGGTGACTACGGCAGTCTTGTGgccg                                                                   >  5:362702/1‑149 (MQ=255)
                                                                              cGGAACCCTTGACGGTATCGTACATGTGCCAGCGCCAGTCGTCGTTCGGGTCGGCCGA‑‑AGCGATGGCGCAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCGGGAAGACCTTGGTGACTACGGCAGTCTTGTGgccgcc                                                                 <  7:340582/148‑1 (MQ=255)
                                                                               ggAACCCTTGACGGTATCGTACATGTGCCAGCGCCAGTCGTCGTTCGGGTCGGCCGA‑‑AGCGATGGCGCAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCTGGAAGACCTTGGTGACTACGGCAGTCTtg                                                                         <  6:230069/139‑1 (MQ=255)
                                                                               ggAACCCTTGACGGTATCGTACATGTGCCAGCGCCAGTCGTCGTTCGGGTCGGCCGA‑‑AGCGATGGCGCAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCAGGAAGACCTTGGTGACTACGGCAGTCTtg                                                                         >  5:230069/1‑139 (MQ=255)
                                                                                       tGACGGTATCGTACATGTGCCAGCGCCAGTCGTCGTTCGGGTCGGCCGA‑‑AGCGATGGCGCAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCGGGAAGACCTTGGTGACTACGGCAGTCTTGTGGCCGCCTTGAGCCAGt                                                       >  7:215020/1‑149 (MQ=255)
                                                                                        gACGGTATCGTACATGTGCCAGCGCCAGTCGTCGTTCGGGTCGGCCGA‑‑AGCGATGGCGCAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCGGGAAGACCTTGGTGACTACGGCAGTCTTGTGGCCGCCTTGAGCCAGtt                                                      >  2:229418/1‑149 (MQ=255)
                                                                                        gACGGTATCGTACATGTGCCAGCGCCAGTCGTCGTTCGGGTCGGCCGA‑‑AGCGATGGCGCAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCGGGAAGACCTTGGTGACTACGGCAGTCTTGTGGCCGCCTTGAGCCAGt                                                       <  4:309893/148‑1 (MQ=255)
                                                                                           gttatactACATGTGCCAGCCCCAGTCGTTGTTGGGGGCGGCCGAATAGCTCAAGCGCAGGTTTTGCCGCGCTGGGCGGATACGGTGGGCGAACGGGTCGGGAAGACCTTGGTGACTACGGCAGTCTTGTGGCCGCCTTGAGCCAGtt                                                      <  1:123580/141‑1 (MQ=255)
                                                                                             tATCGTACATGTGCCAGCGCCAGTCGTCGTTCGGGTCGGCCGA‑‑AGCGATGGCGCAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCGGGAAGACCTTGGTGACTACGGCAGTCTTGTGGCCGCCTTGAGCCAGTTGCAgc                                                 >  8:166621/1‑149 (MQ=255)
                                                                                                  tACATGTGCCAGCGCCAGTCGTCGTTCGGGTCGGCCGA‑‑AGCGATGGCGCAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCGGGAAGCCCTTGGTGACTACGGCAGTCTTGTGGCCGCCTTGAGCCAGTTGCAGCGCTgc                                            >  3:105935/1‑149 (MQ=255)
                                                                                                  tACATGTGCCAGCGCCAGTCGTCGTTCGGGTCGGCCGA‑‑AGCGATGGCGCAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGCTCGGGAAGACCTTGGTGACTACGGCAGTCTTGTGGCCGCCTTGAGCCAGTTGCAGCGCTgc                                            >  6:203059/1‑149 (MQ=255)
                                                                                                    cATGTGCCAGCGCCAGTCGTCGTTCGGGTCGGCCGA‑‑AGCGATGGCGCAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCGGGAAGACCTTGGTGACTACGGCAGTCTTGTGGCCGCCTTGAGCCAGTTGCAGCGCTgcgc                                          <  6:362702/149‑1 (MQ=255)
                                                                                                         gCCAGCGCCAGTCGTCGTTCGGGTCGGCCGA‑‑AGCGATGGCGCAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCGGGAAGACCTTGGTGACTACGGCAGTCTTGTGGCCGCCTTGAGCCAGTTGCAGCGCTGCGCGCATg                                     >  4:68419/1‑149 (MQ=255)
                                                                                                          ccAGCGCCAGTCGTCGTTCGGGTCGGCCGA‑‑AGCGATGGCGCAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCGGGAAGACCTTGGTGACTACGGCAGTCTTGTGGCCGCCTTGAGCCAGTTGCAGCGCTGCGCGCAtcc                                    >  4:290873/1‑147 (MQ=255)
                                                                                                            cctgcgccatcgcttcggccgacccgaacgacgactggcgcAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCGGGAAGACCTTGGTGACTACGGCAGTCTTGTGGCCGCCTTGAGCCAGTTGCa                                                   <  2:326117‑M2/93‑1 (MQ=255)
                                                                                                            cctgcgccatcgcttcggccgacccgaacgacgactggcgcAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCGGGAAGACCTTGGTGACTACGGCAGTCTTGTGGCCGCCTTGAGCCAGTTGCa                                                   >  1:326117‑M2/42‑134 (MQ=255)
                                                                                                            aGCGCCAGTCGTCGTTCGGGTCGGCCGA‑‑AGCGATGGCGCAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCGGGAAGACCTTGGTGACTACGGCAGTCTTGTGGCCGCCTTGAGCCAGTTGCAGCGCTGCGCGCATGCCg                                  >  8:308124/1‑149 (MQ=255)
                                                                                                             ctgcgccatcgcttcggccgacccgaacgacgactggcgcAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCGGGAAGACCTTGGTGACTACGGCAGTCTTGTGGCCGCCTTGAGCCAGTTGCAGCGCTGCGCGCATGcc                                   >  5:267286‑M2/41‑149 (MQ=255)
                                                                                                                    tcgtcgTTCGGGTCGGCCGA‑‑AGCGATGGCGCAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCGGGAAGACCTTGGTGACTACGGCAGTCTTGTGGCCGCCTTGAGCCAGTTGCAGCGCTGCGCGCATGCCGGcgccgcc                          <  6:254929/149‑1 (MQ=255)
                                                                                                                     cgtcgtTCGGGTCGGCCGA‑‑AGCGATGGCGCAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCGGGAAGACCTTGGTGACTACGGCAGTCTTGTGGCCGCCTTGAGCCAGTTGCAGCGCTGCGCGCATGCCGGcgccgccg                         <  2:196233/149‑1 (MQ=255)
                                                                                                                      gtcgtTCGGGTCGGCCTT‑‑AGCGATGGCGCAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCGGGAAGACCTTGGTGACTACGGCAGTCTTGTGGCCGCCTTGAGCCAGTTGCAGCGCTGCGCGCATGCCGGcgccgccgc                        <  8:341301/149‑1 (MQ=255)
                                                                                                                       tcgtTCGGGTCGGCCGA‑‑AGCGATGGCGCAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCGGGAAGACCTTGGTGACTACGGCAGTCTTGTGGCCGCCTTGAGCCAGTTGCAGCGCTGCGCGCATGCCGGcgccgccgc                        >  7:51553/1‑148 (MQ=255)
                                                                                                                                   gCCGA‑‑AGCGATGGCGCAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCGGGAAGACCTTGGTGACTACGGCAGTCTTGTGGCCGCCTTGAGCCAGTTGCAGCGCTGCGCGCATGCCGGCGCCGCCGCCACCgatgatgat           >  2:301294/1‑149 (MQ=255)
                                                                                                                                      gA‑‑AGCGATGGCGCAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCGGGAAGACCTTGGTGACTACGGCAGTCTTGTGGCCGCCTTGAGCCAGTTGCAGCGCTGCGCGCATGCCGGCGCCGCCGCCACCGATGATGATGGc        >  5:178321/1‑149 (MQ=255)
                                                                                                                                      gA‑‑AGCGATGGCGCAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCGGGAAGACCTTGGTGACTACGGCAGTCTTGTGGCCGCCTTGAGCCAGTTGCAGCGCTGCGCGCATGCCGGCGCCGCCGCCACCGATGATGATGGc        >  2:65107/1‑149 (MQ=255)
                                                                                                                                            cGATGGCGCAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCGGGAAGACCTTGGTGACTACGGCAGTCTTGTGGCCGCCTTGAGCCAGTTGCAGCGCTGCGCGCATGCCGGCGCCGCCGCCACCGATGATGATGGCGTCg    <  5:203059/149‑1 (MQ=255)
                                                                                                                                              aTGGCGCAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCGGGAAGACCTTGGTGACTACGGCAGTCTTGTGGCCGCCTTGAGCCAGTTGCAGCGCTGCGCGCATGCCGGCGCCGCCGCCACCGATGATGATGGCGTCGaa  <  7:166621/149‑1 (MQ=255)
                                                                                                                                                   gcAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCGGGAAGACCTTGGTGACTACGGCAGTCTTGTGGCCGCCTTGa                                                             <  6:315333‑M2/83‑1 (MQ=255)
                                                                                                                                                   gcAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCGGGAAGACCTTGGTGACTACGGCAGTCTTGTGGCCGCCTTGa                                                             >  5:315333‑M2/3‑85 (MQ=255)
                                                                                                                                                     |                                                                                                                                             
CCATGTGGTCCAGTTCGAAGACCGCAGCCGGGCCTTCCTGACACATGTATTCGATAGCGTCCTGGTCACCGATGTAGTCGGAACCCTTGACGGTATCGTACATGTGCCAGCGCCAGTCGTCGTTCGGGTCGGCCGA‑‑AGCGATGGCGCAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCGGGAAGACCTTGGTGACTACGGCAGTCTTGTGGCCGCCTTGAGCCAGTTGCAGCGCTGCGCGCATGCCGGCGCCGCCGCCACCGATGATGATGGCGTCGAA  >  NC_002947/4738057‑4738345

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.