New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4774255 | 54 (0.900) | 6 (0.100) | 5/254 | NT | 11.0% | coding (5012/10413 nt) | pvdD | non‑ribosomal peptide synthetase |
? | NC_002947 | = 4774300 | 45 (0.780) | coding (4967/10413 nt) | pvdD | non‑ribosomal peptide synthetase |
CGCGCCCTTGGGCCGCCCTGTGGAACCGGAGGTGTAGATCACATAGGCCAGGTTGGCGAGGCGAACGTCCACCTCAGGGGCGGTGTCGGCATAGCCGGCCAGCCACTGCGCGTCCTGGTCCAGGCACAGGATACGTACCGCTGCCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4774107‑4774255 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcaTCGGCCTGCTGCTCAGCCAGCAAGCATTGGCCGAGCGCCTGCCGGTGCCGGCAGCGGTACGTATCCTGTGCCTGGACCAGGACGCGCAGTGGCTGGCCGGCTATGCCGACACCGCCCCTGAGGTGGACGTTCGCCTCGCCAACCTGG < NC_002947/4774300‑4774154 CGCGCCCTTGGGCCGCCCTGTGGAACCGGAGGTGTAGATCACATAGGCCAGGTTGTCTATTCGAACGTCCACCTCAGGGGCGGTGTCGGCATAGCCGGCCAGCCACTGCGCGTCCTGGTCCAGGCACAGGATACGTACCGCTGCCGGCA > 8:270374/1‑149 TGGAACCGGAGGTGTAGATCACATAGGCCAGGTTGGCGAGGCGAACGTCCACCTCAGGGGCGGTGTCGGCATAGCCGGCCAGCCACTGCGCGTCCTGGTCCAGGCACAGGATACGTACCGCTGCCGGCATCGGCCTGCTGCTCAGCCAG > 3:240508/1‑149 GCCAGGTTGGCGAGGCGAACGTCCACCTCAGGGGCGGTGTCGGCATAGCCGGCCAGCCACTGCGCGTCCTGGTCCAGGCACAGGATACGTACCGCTGCCGGCATCGGCCTGCTGCTCAGCCAGCAAGCATTGGCCGAGCGCCTGCCGGT > 5:111779/1‑149 CCAGGTTGGCGAGGCGAACGTCCACCTCAGGGGCGGTGTCGGCATAGCCGGCCAGCCACTGCGCGTCCTGGTCCAGGCACAGGATACGTACCGCTGCCGGCATCGGCCTGCTGCTCAGCCAGCAAGCATTGGCCGAGCGCCTGCCGGTG < 7:302611/149‑1 CAGGTTGGCGAGGCGAACGTCCACCTCAGGGGCGGTGTCGGCATAGCCGGCCAGCCACTGCGCGTCCTGGTCCAGGCACAGGATACGTACCGCTGCCGGCATCGGCCTGCTGCTCAGCCAGCAAGCATTGGCCGAGCGCCTGCCGGTGC < 4:240508/149‑1 CAGGTTGGCGAGGCGAACGTCCACCTCAGGGGCGGTGTCGGCATAGCCGGCCAGCCACTGCGCGTCCTGGTCCAGGCACAGGATACGTACCGCTGCCGGCATCGGCCTGCTGCTCAGCCAGCAAGCATTGGCCGAGCGCCTGCCGGTGC < 6:111779/149‑1 GGTTGGCGAGGCGAACGTCCACCTCAGGGGCGGTGTCGGCATAGCCGGCCAGCCACTGCGCGTCCTGGTCCAGGCACAGGATACGTACCGCTGCCGGCATCGGCCTGCTGCTCAGCCAGCAAGCATTGGCCGAGCGCCTGCCGGTGCCG < 7:307823/149‑1 GCATCGGCCTGCTGCTCAGCCAGCAAGCATTGGCCGAGCGCCTGCCGGTGCCGGCAGCGGTACGTATCCTGTGCCTGGACCAGGACGCGCCGTGGCTGGCCGGCTATGCCGACACCGCCCCTGAGGTGGACGTTCGCCTCGCCAACCTG > 6:165935/1‑149 CATCGGCCTGCTGCTCAGCCAGCAAGCATTGGCCGAGCGCCTGCCGGTGCCGGCAGCGGTACGTATCCTGTGCCTGGACCAGGACGCGCAGTGGCTGGCCGGCTATGCCGACACCGCCCCTGAGGTGGACGTTCGCCTCGCCAACCTGG > 1:333263/1‑149 CGCGCCCTTGGGCCGCCCTGTGGAACCGGAGGTGTAGATCACATAGGCCAGGTTGGCGAGGCGAACGTCCACCTCAGGGGCGGTGTCGGCATAGCCGGCCAGCCACTGCGCGTCCTGGTCCAGGCACAGGATACGTACCGCTGCCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4774107‑4774255 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcaTCGGCCTGCTGCTCAGCCAGCAAGCATTGGCCGAGCGCCTGCCGGTGCCGGCAGCGGTACGTATCCTGTGCCTGGACCAGGACGCGCAGTGGCTGGCCGGCTATGCCGACACCGCCCCTGAGGTGGACGTTCGCCTCGCCAACCTGG < NC_002947/4774300‑4774154 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |