New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4774255	54 (0.900)	6 (0.100)	5/254	NT	11.0%	coding (5012/10413 nt)	pvdD	non‑ribosomal peptide synthetase
	?	NC_002947	= 4774300	45 (0.780)					coding (4967/10413 nt)	pvdD	non‑ribosomal peptide synthetase

GGCCAGGTTGGCGAGGCGAACGTCCACCTCAGGGGCGGTGTCGGCATAGCCGGCCAGCCACTGCGCGTCCTGGTCCAGGCACAGGATACGTACCGCTGCCGGCACCGGCAGGCGCTCGGCCAATGCTTGCTGGCTGAGCAGCAGGCCGATGCCGCTGTCCTCGATCATGTAGGCCAGGCGGTCGCTCGGGTAATCCGGGTCCAGCGGTACATAGGCGCCCCCGGCCTTGAGCACGGCCATCAGGCCTATCACCAGTTCCAGGCTTCTTTCCACCGCCACGCCAACCAGCACTTCCGG  >  NC_002947/4774152‑4774448                                                                                                                                                     |                                                                                                                                                     ggCCAGGTTGGCGAGGCGAACGTCCACCTCAGGGGCGGTGTCGGCATAGCCGGCCAGCCACTGCGCGTCCTGGTCAAGGCACAGGATACGTACCGCTGCCGGCACCGGCAGGCGCTCGGCCAATGCTTGCTGGCTGAGCAGCAGGCCGa                                                                                                                                                      >  6:191911/1‑149 (MQ=255)   ccAGGTTGGCGAGGCGAACGTCCACCTCAGGGGCGGTGTCGGCATAGCCGGCCAGCCACTGCGCGTCCTGGTCCAGGCACAGGATACGTACCGCTGCCGGCACCGGCAGGCGCTCGGCCAATGCTTGCTGGCTGAGCAGCAGGCCGAtg                                                                                                                                                    >  1:333263‑M2/1‑147 (MQ=255)    cAGGTTGGCGAGGCGAACGTCCACCTCAGGGGCGGTGTCGGCATAGCCGGCCAGCCACGGCGCGTCCTGGTCCAGGCACAGGATACGTACCGCTGCCGGCACCGGCAGGCGCTCGGCCAATGCTTGCTGGCTGAGCAGCAGGCCGAtgc                                                                                                                                                   >  6:165935‑M2/1‑146 (MQ=255)       gTTGGCGAGGCGAACGTCCACCTCAGGGGCGGTGTCGGCATAGCCGGCCAGCCACTGCGCGTCCTGGTCCAGGCACAGGATACGTACCGCTGCCGGCACCGGCAGGCGCTCGGCCAATGCTTGCTGGCTGAGCAGCAGGCCGATGCCGc                                                                                                                                                >  1:149967/1‑149 (MQ=255)       gTTGGCGAGGCGAACGTCCACCTCAGGGGCGGTGTCGGCATAGCCGGCCAGCCACTGCGCGTCCTGGTCCAGGCACAGGATACGTACCGCTGCCGGCACCGGCAGGCGCTCGGCCAATGCTTGCTGGCTGAGCAGCAGGCCGATGCCGc                                                                                                                                                <  5:372817/149‑1 (MQ=255)          ggcgaggcgaACGTCCACCTCAGGGGCGGTGTCGGCATAGCCGGCCAGCCACTGCGCGTCCTGGTCCAGGCACAGGATACGTACCGCTGCCGGCACCGGCAGGCGCTCGGCCAATGCTTGCTGGCTGAGCAGCAGGCCGATGCCGCTg                                                                                                                                              <  6:106737/148‑1 (MQ=255)             gaggcgaACGTCCACCTCAGGGGCGGTGTCGGCATAGCCGGCCAGCCACTGCGCGTCCTGGTCCAGGCACAGGATACGTACCGCTGCCGGCACCGGCAGGCGCTCGGCCAATGCTTGCTGGCTGAGCAGCAGGCCGATGCCGCTGTCCt                                                                                                                                          <  8:200834/149‑1 (MQ=255)                  gaACGTCCACCTCAGGGGCGGTGTCGGCATAGCCGGCCAGCCACTGCGCGTCCTGGTCCAGGCACAGGATACGTACCGCTGCCGGCACCGGCAGGCGCTCGGCCAATGCTTGCTGGCTGAGCAGCAGGCCGATGCCGCTGTCCTCGATc                                                                                                                                     <  6:251855/149‑1 (MQ=255)                  gaACGTCCACCTCAGGGGCGGTGTCGGCATAGCCGGCCAGCCACTGCGCGTCCTGGTCCAGGCACAGGATACGTACCGCTGCCGGCACCGGCAGGCGCTCGGCCAATGCTTGCTGGCTGAGCAGCAGGCCGATGCCGCTGTCCTCGATc                                                                                                                                     <  6:100384/149‑1 (MQ=255)                        ccACCTCAGGGGCGGTGTCGGCATAGCCGGCCAGCCACTGCGCGTCCTGGTCCAGGCACAGGATACGTACCGCTGCCGGCACCGGCAGGCGCTCGGCCAATGCTTGCTGGCTGAGCAGCAGGCCGATGCCGCTGTCCTCGATCATGTAg                                                                                                                               <  7:270374/149‑1 (MQ=255)                             tCAGGGGCGGTGTCGGCATAGCCGGCCAGCCACTGCGCGTCCTGGTCCAGGCACAGGATACGTACCGCTGCCGGCACCGGCAGGCGCTCGGCCAATGCTTGCTGGCTGAGCAGCAGGCCGATGCCGCTGTCCTCGATCATGTAGGCCAg                                                                                                                          >  5:242417/1‑149 (MQ=255)                                 gggCGGTGTCGGCATAGCCGGCCAGCCACTGCGCGTCCTGGTCCAGGCACAGGATACGTACCGCTGCCGGCACCGGCAGGCGCTCGGCCAATGCTTGCTGGCTGAGCAGCAGGCCGATGCCGCTGTCCTCGATCATGTAGGCCAGGCgg                                                                                                                      >  8:299379/1‑149 (MQ=255)                                 gggCGGTGTCGGCATAGCCGGCCAGCCACTGCGCGTCCTGGTCCAGGCACAGGATACGTACCGCTGCCGGCACCGGCAGGCGCTCGGCCAATGCTTGCTGGCTGAGCAGCAGGCCGATGCCGCTGTCCTCGATCATGTAGGCCAGGCgg                                                                                                                      <  5:238426/149‑1 (MQ=255)                                        gtCGGCATAGCCGGCCAGCCACTGCGCGTCCTGGTCCAGGCACAGGATACGTACCGCTGCCGGCACCGGCAGGCGCTCGGCCAATGCTTGCTGGCTGAGCAGCAGGCCGATGCCGCTGTCCTCGATCATGTAGGCCAGGCGGTCGCTCg                                                                                                               >  3:101767/1‑149 (MQ=255)                                            gCATAGCCGGCCAGCCACTGCGCGTCCTGGTCCAGGCACAGGATACGTACCGCTGCCGGCACCGGCAGGCGCTCGGCCAATGCTTGCTGGCTGAGCAGCAGGCCGATGCCGCTGTCCTCGATCATGTAGGCCAGGCGGTCGCTCgg                                                                                                              <  7:309396/146‑1 (MQ=255)                                            gCATAGCCGGCCAGCCACTGCGCGTCCTGGTCCAGGCACAGGATACGTACCGCTGCCGGCACCGGCAGGCGCTCGGCCAATGCTTGCTGGCTGAGCAGCAGGCCGATGCCGCTGTCCTCGATCATGTAGGCCAGGCGGTCGCTCgg                                                                                                              >  8:309396/1‑146 (MQ=255)                                            gCATAGCCGGCCAGCCACTGCGCGTCCTGGTCCAGGCACAGGATACGTACCGCTGCCGGCACCGGCAGGCGCTCGGCCAATGCTTGCTGGCTGAGCAGCAGGCCGATGCCGCTGACCTCGATCATGTAGGCCAGGCGGTCGCTCgg                                                                                                              >  6:145976/1‑146 (MQ=255)                                            gCATAGCCGGCCAGCCACTGCGCGTCCTGGTCCAGGCACAGGATACGTACCGCTGCCGGCACCGGCAGGCGCTCGGCCAATGCTTGCTGGCTGAGCAGCAGGCCGATGCCGCTGACCTCGATCATGTAGGCCAGGCGGTCGCTCgg                                                                                                              <  5:145976/146‑1 (MQ=255)                                                aGCCGGCCAGCCACTGCGCGTCCTGGTCCAGGCACAGGATACGTACCGCTGCCGGCACCGGCAGGCGCTCGGCCAATGCTTGCTGGCTGAGCAGCAGGCCGATGCCGCTGTCCTCGATCATGTAGGCCAGGCGGTCGCTCGGGTAATcc                                                                                                       >  4:370052/1‑149 (MQ=255)                                                  ccGGCCAGCCACTGCGCGTCCTGGTCCAGGCACAGGATACGTACCGCTGCCGGCACCGGCAGGCGCTCGGCCAATGCTTGCTGGCTGAGCAGCAGGCCGATGCCGCTGTCCTCGATCATGTAGGCCAGGCGGTCGCTCGGGTAATCCgg                                                                                                     <  5:363363/149‑1 (MQ=255)                                                   cGGCCAGCCACTGCGCGTCCTGGTCCAGGCACAGGATACGTACCGCTGCCGGCACCGGCAGGCGCTCGGCCAATGCTTGCTGGCTGAGCAGCAGGCCGATGCCGCTGTCCTCGATCATGTAGGCCAGGCGGTCGCTCGGGTAATCCggg                                                                                                    <  4:101767/149‑1 (MQ=255)                                                      ccagccaCTGCGCGTCCTGGTCCAGGCACAGGATACGTACCGCTGCCGGCACCGGCAGGCGCTCGGCCAATGCTTGCTGGCTGAGCAGCAGGCCGATGCCGCTGTCCTCGATCATGTAGGCCAGGCGGTCGCTCGGGTAATCCGGGTcc                                                                                                 <  6:183302/149‑1 (MQ=255)                                                          ccaCTGCGCGTCCTGGTCCAGGCACAGGATACGTACCGCTGCCGGCACCGGCAGGCGCTCGGCCAATGCTTGCTGGCTGAGCAGCAGGCCGATGCCGCTGTCCTCGATCATGTAGGCCAGGCGGTCGCTCGGGTAATCCGGGTCCAGCg                                                                                             >  4:63741/1‑149 (MQ=255)                                                            aCTGCGCGTCCTGGTCCAGGCACAGGATACGTACCGCTGCCGGCACCGGCAGGCGCTCGGCCAATGCTTGCTGGCTGAGCAGCAGGCCGATGCCGCTGTCCTCGATCATGTAGGCCAGGCGGTCGCTCGGGTAATCCGGGTCCAGCGGt                                                                                           <  2:258258/149‑1 (MQ=255)                                                                       tGGTCCAGGCACAGGATACGTACCGCTGCCGGCACCGGCAGGCGCTCGGCCAATGCTTGCTGGCTGAGCAGCAGGCCGATGCCGCTGTCCTCGATc                                                                                                                                     >  8:151415/1‑96 (MQ=255)                                                                       tGGTCCAGGCACAGGATACGTACCGCTGCCGGCACCGGCAGGCGCTCGGCCAATGCTTGCTGGCTGAGCAGCAGGCCGATGCCGCTGTCCTCGATc                                                                                                                                     <  7:151415/96‑1 (MQ=255)                                                                                cacaGGATACGTACCGCTGCCGGCACCGGCAGGCGCTCGGCCAATGCTTGCTGGCTGAGCAGCAGGCCGATGCCGCTGTCCTCGATCATGTAGGCCAGGCGGTCGCTCGGGTAATCCGGGTCCAGCGGTACATAGGCGCCCCCGGCCtt                                                                       <  2:303387/149‑1 (MQ=255)                                                                                cacaGGATACGTACCGCTGCCGGCACCGGCAGGCGCTCGGCCAATGCTTGCTGGCTGAGCAGCAGGCCGATGCCGCTGTCCTCGATCATGTAGGCCAGGCGGTCGCTCGGGTAATCCGGGTCCAGCGGTACATAGGCGCCCCCGGCCtt                                                                       <  6:242417/149‑1 (MQ=255)                                                                                   aGGATACGTACCGCTGCCGGCACCGGCAGGCGCTCGGCCAATGCTTGCTGGCTGAGCAGCAGGCCGATGCCGCTGTCCTCGATCATGTAGGCCAGGCGGTCGCTCGGGTAATCCGGGTCCAGCGGTACATAGGCGCCCCCGGCCTTGAg                                                                    >  3:40895/1‑149 (MQ=255)                                                                                   aGGATACGTACCGCTGCCGGCACCGGCAGGCGCTCGGCCAATGCTTGCTGGCTGAGCAGCAGGCCGATGCCGCTGTCCTCGATCATGTAGGCCAGGCGGTCGCTCGGGTAATCCGGGTCCAGCGGTACATAGGCGCCCCCGGCCTTGAg                                                                    >  3:227428/1‑149 (MQ=255)                                                                                         cgagcaccTGCCGGTGCCGGCAGGCGCTCGGCCAATGCTTGCTGGCTGAGCAGCAGGCCGATGCCGCTGTCCTCGATCATGTAGGCCAGGCGGTCGCTCGGGTAATCCGGGTCCCGCGGTACATAGGCGCCCCCGGCCTTGAGCACGGc                                                              >  3:258529/8‑149 (MQ=38)                                                                                          gTACCGCTGCCGGCATCGGCAGGCGCTCGGCCAATGCTTGCTGGCTGAGCAGCAGGCCGATGCCGCTGTCCTCGATCATGTAGGCCAGGCGGTCGCTCGGGTAATCCGGGTCCAGCGGTACATAGGCGCCCCCGGCCTTGAGCACGGc                                                              >  4:315712/1‑148 (MQ=255)                                                                                            aCCGCTGCCGGCACCGGCAGGCGCTCGGCCAATGCTTGCTGGCTGAGCAGCAGGCCGATGCCGCTCTCCTCGATCATGTAGGCCAGGCGGTCGCTCGGGTAATCCGGGTCCAGCGGTACATAGGCGCCCCCGGCCTTGAGCACGGCCAt                                                           >  5:339155/1‑149 (MQ=255)                                                                                               ccTGCCGGTGCCGGCAGGCGCTCGGCCAATGCTTGCTGGCTGAGCAGCAGGCCGATGCCGCTGTCCTCGATCATGTAGGCCAGGCGGTCGCTCGGGTAATCCGGGTCCAGCGGTACATAGGCGCCCCCGGCCTTGAGCACGGCCATccg                                                        >  2:289399/2‑147 (MQ=255)                                                                                                 tGCCGGCACCGGCAGGCGCTCGGCCAATGCTTGCTGGCTGAGCAGCAGGCCGATGCCGCTGTCCTCGATCATGTAGGCCAGGCGGTCGCTCGGGTAATCCGGGTCCAGCGGTACATAGGCGCCCCCGGCCTTGAGCACGGCCATCAGGc                                                      >  4:155033/1‑149 (MQ=255)                                                                                                   ccggcaccggcaGGCGCTCGGCCAATGCTTGCTGGCTGAGCAGCAGGCCGATTCCGCTGTCCTCGATCATGTAGGCCAGGCGGTCGCTCGGGTAATCCGGGTCCAGCGGTACATAGGCGCCCCCGGCCTTGAGCACGGCCATCAGGc                                                      <  5:191911/147‑1 (MQ=255)                                                                                                    cggcaccggcaGGCGCTCGGCCAATGCTTGCTGGCTGAGCAGCAGGCCGAtgccggcagcggtacgtatcctgtgcctggaccaggacgcgcagtggctggccggctatgccgacaccgcccctgaggtggacgttcgcctcgccaacc                                                   <  7:307823‑M2/149‑100 (MQ=255)                                                                                                     ggcaccggcaGGCGCTCGGCCAATGCTTGCTGGCTGAGCAGCAGGCCGATGCCGCTGTCCTCGATCATGTAGGCCAGGCGGTCGCTCGGGTAATCCGGGTCCAGCGGTACATAGGCGCCCCCGGCCTTGAGCACGGCCATCAGGCCTAt                                                  <  3:63741/149‑1 (MQ=255)                                                                                                      gcaccggcaGGCGCTCGGCCAATGCTTGCTGGCTGAGCAGCAGGCCGAtgccggcagcggtacgtatcctgtgcctggaccaggacgcgcagtggctggccggctatgccgacaccgcccctgaggtggacgttcgcctcgccaacctg                                                 <  4:240508‑M2/149‑102 (MQ=255)                                                                                                      gcaccggcaGGCGCTCGGCCAATGCTTGCTGGCTGAGCAGCAGGCCGAtgccggcagcggtacgtatcctgtgcctggaccaggacgcgcagtggctggccggctatgccgacaccgcccctgaggtggacgttcgcctcgccaacctg                                                 <  6:111779‑M2/149‑102 (MQ=255)                                                                                                       caccggcaGGCGCTCGGCCAATGCTTGCTGGCTGAGCAGCAGGCCGAtgccggcagcggtacgtatcctgtgcctggaccaggacgcgcagtggctggccggctatgccgacaccgcccctgaggtggacgttcgcctcgccaacctgg                                                <  7:302611‑M2/149‑103 (MQ=255)                                                                                                        accggcaGGCGCTCGGCCAATGCTTGCTGGCTGAGCAGCAGGCCGAtgccggcagcggtacgtatcctgtgcctggaccaggacgcgcagtggctggccggctatgccgacaccgcccctgaggtggacgttcgcctcgccaacctggc                                               >  5:111779‑M2/1‑46 (MQ=255)                                                                                                            gcaGGCGCTCGGCCAATGCTTGCTGGCTGAGCAGCAGGCCGATGCCGCTGTCCTCGATCATGTAGGCCAGGCGGTCGCTCGGGTAATCCGGGTCCAGCGGTACATAGGCGCCCCCGGCCTTGAGCACGGCCATCAGGCCTATCACCAGt                                           >  6:210653/1‑149 (MQ=255)                                                                                                            gaattcgcTCGGCCATTGCTTGATGGCTGAGAAGCAGTCCGATGCCGCTGTCCTCGATCATGTAGGCTAGGCGGTCGCTCGTGTAATCGGGGTCCAGCGGTACATAGGCGCCCCCTGCCTTGAGCACGGCCATCAGGCCTATCACCAGt                                           <  4:228829/144‑1 (MQ=37)                                                                                                                   cTCGGCCAATGCTTGCTGGCTGAGCAGCAGGCCGATGCCGCTGTCCTCGATCATGTAGGCCAGGCGGTCGCTCGGGTAATCCGGGTCCAGCGGTACATAGGCGCCCCCGGCCTTGAGCACGGCCATCAGGCCTATCACCAGTTCCAGGc                                    <  3:155033/149‑1 (MQ=255)                                                                                                                    tCGGCCACTGCTTGCTGGCTGAGCAGCAGGCCGATGCCGCTGTCCTCGATCATGTAGGCCAGGCGGGCGCTCGGGTAATCCGGGTCCAGCGGTACATAGGCGCCCCCGGCCTTGAGCACGGCCAt                                                           <  6:67535/125‑1 (MQ=255)                                                                                                                    tCGGCCAATGCTTGCTGGCTGAGCAGCAGGCCGATGCCGCTGTCCTCGATCATGTAGGCCAGGCGGTCGCTCGGGTAATCCGGGTCCAGCGGTACATAGGCGCCCCCGGCCTTGAGCACGGCCATCAGGCCTATCACCAGTTCCAGGct                                   >  8:298951/1‑149 (MQ=255)                                                                                                                       gCCAATGCTTGCTGGCTGAGCAGCAGGCCGATGCCGCTGTCCTCGATCATGTAGGCCAGGCGGTCGCTCGGGTAATCCGGGTCCAGCGGTACATAGGCGCCCCCGGCCTTGAGCACGGCCATCAGGCCTATCACCAGTTCCAGGcttct                                >  2:327700/1‑149 (MQ=255)                                                                                                                         cAATGCTTGCTGGCTGAGCAGCAGGCCGATGCCGCTGTCCTCGATCATGTAGGCCAGGCGGTCGCTCGGGTAATCCGGGTCCAGCGGTACATAGGCGCCCCCGGCCTTGAGCACGGCCATCAGGCCTATCACCAGTTCCAGGCTTCttt                              >  8:66433/1‑149 (MQ=255)                                                                                                                          aaTGCTTGCTGGCTGAGCAGCAGGCCGATGCCGCTGTCCTCGATCATGTAAGCCAGGCGGTCGCTCGGGTAATCCGGGTCCAGCGGTACATAGGCGCCCCCGGCCTTGAGCACGGCCATCAGGCCTATCACCAGTTCCAGGCTTCTTTc                             >  1:282776/1‑149 (MQ=255)                                                                                                                            tgcttgctGGCTGAGCAGCAGGCCGATGCCGCTGTCCTCGATCATGTAGGCCAGGCGGTCGCTCGTGTAATCCGGGTCCAGCGGTACATAGGCGCCCCCGGCCTTGAGCACGGCCATCAGGCCTATCACCAGTTCCAGGCTTCTTTCCa                           <  1:327700/149‑1 (MQ=255)                                                                                                                               ttgctGGCTGAGCAGCAGGCCGATGCCGCTGTCCTCGATCATGTAGGCCAGGCGGTCGCTCGGGAAATCCGGGTCCAGCGGTACATAGGCGCCCCCGGCCTTGAGCACGGCCATCAGGCCTATCCCCAGTTCCCGGCTTCTTTCCCCcg                        >  4:313943/1‑149 (MQ=255)                                                                                                                                  ctggctgAGCAGCAGGCCGAtgccggcagcggtacgtatcctgtgcctggaccaggacgcgcagtggctggccggctatgccgacaccgcccctgaggtggacgttcgcctcgccaacctggcctatgtgatctacacctccggttcca                     >  3:240508‑M2/1‑20 (MQ=255)                                                                                                                                     gctgAGCAGCAGGCCGATGCCGCTGTCCTCGATCATGTAGGCCAGGCGGTCGCTCGGGTAATCCGGGTCCAGCGGTACATAGGCGCCCCCGGCCTTGAGCACGGCCATCAGGCCTATCACCAGTTCCAGGCTTCTTTCCACcgccacgc                  >  5:25764/1‑149 (MQ=255)                                                                                                                                            agcagGCCGATGCCGCTGTCCTCGATCATGTAGGCCAGGCGGTCGCTCGGGTAATCCGGGTCCAGCGGTACATAGGCGCCCCCGGCCTTGAGCACGGCCATCAGGCCTATCACCAGTTCCAGGCTTCTTTCCACCGCCACGCCAACCAg           >  8:151271/1‑149 (MQ=255)                                                                                                                                             gcagGCCGATGCCGCTGTCCTCGATCATGTAGGCCAGGCGGTCGCTCGGGTAATCCGGGTCCAGCGGTACATAGGCGCCCCCGGCCTTGAGCACGGCCATCAGGCCTATCACCAGTTCCAGGCTTCTTTCCACCGCCACGCCAACCAGc          <  4:40895/149‑1 (MQ=255)                                                                                                                                              cagGCCGATGCCGCTGTCCTCGATCATGTAGGCCAGGCGGTCGCTCGGGTAATCCGGGTCCAGCGGTACATAGGCGCCCCCGGCCTTGAGCACGGCCATCAGGCCTATCACCAGTTCCAGGCTTCTTTCCACCGCCACGCCAACCAGCa         >  7:1548/1‑149 (MQ=255)                                                                                                                                                     aTGCCGCTGTCCTCGATCATGTAGGCCAGGCGGTCGCTCGGGTAATCCGGGTCCAGCGGTACATAGGCGCCCCCGGCCTTGAGCACGGCCATCAGGCCTATCACCAGTTCCAGGCTTCTTTCCACCGCCACGCCAACCAGCACTTCCgg  <  4:227428/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                     GGCCAGGTTGGCGAGGCGAACGTCCACCTCAGGGGCGGTGTCGGCATAGCCGGCCAGCCACTGCGCGTCCTGGTCCAGGCACAGGATACGTACCGCTGCCGGCACCGGCAGGCGCTCGGCCAATGCTTGCTGGCTGAGCAGCAGGCCGATGCCGCTGTCCTCGATCATGTAGGCCAGGCGGTCGCTCGGGTAATCCGGGTCCAGCGGTACATAGGCGCCCCCGGCCTTGAGCACGGCCATCAGGCCTATCACCAGTTCCAGGCTTCTTTCCACCGCCACGCCAACCAGCACTTCCGG  >  NC_002947/4774152‑4774448

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.