New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4856096 = | 59 (0.980) | 11 (0.200) | 9/236 | NT | 18.5% | intergenic (+68/+128) | PP_4270/PP_5670 | hypothetical protein/hypothetical protein |
? | NC_002947 | 4856183 = | 44 (0.820) | intergenic (+155/+41) | PP_4270/PP_5670 | hypothetical protein/hypothetical protein |
GTCAGCGTGGCGTTTGAACGTAAAGGCCGGTGACGTTGAGTTTGTGATAGAGATTGTGAATGTGCCGCACAATGCTGTGGGAGCGGGCATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4856256‑4856096 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgctcccacagCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAACGTCACCGGCCTTTACGTTCAAACGCCACGCTGACAGCATCCGCCTGCCCCCAGGCAATCTGCATGGCCCGCAACCCATGCTCCAATAACTGCCTGGTTTCTTCGTCC > NC_002947/4856183‑4856329 GTCAGCGTGCCCTTTGAACGTAAAGGCCGGTGACGTTGAGTTTGTGATAGAGATTGTGAATGTGCCGCACAATGCTGTCGGAGCGGGCATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGC > 2:310137/1‑149 GCGTGGCGTTTGAACGTAAAGGCCGGTGACGTTGAGTTTGTGATAGAGATTGTGAATGTGCCGCACAATGCTGTGGGAGCGGGCATGACCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGC > 8:346110/1‑149 CGTGGCGTTTGAACGTAAAGGCCGGTGACGTTGAGTTTGTGATAGAGATTGTGAATGTGCCGCACAATGCTGTGGGAGCGGGCATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCT < 5:100410/149‑1 TTTGAACGTAAAGGCCGGTGACGTTGAGTTTGTGATAGAGATTGTGAATGTGCCGCACAATGCTGTGGGAGCGGGCATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTC > 3:158198/1‑143 AAGGCCGGTGACGTTGAGTTTGTGATAGAGATTGTGAATGTGCCGCACAATGCTGTGGGAGCGGGCATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTC > 6:123980/1‑133 AAGGCCGGTGACGTTGAGTTTGTGATAGAGATTGTGAATGTGCCGCACAATGCTGTGGGAGCGGGCATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTC < 5:123980/133‑1 GGAGCGGGCATGCCCGCGAAGAATATAGCGCGGTGGATGGCGCGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAACGTCACCGGCCTTTACGTTCAAACGCCA > 7:162959/1‑149 GGCATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAACGTCACCGGCCTTTACGTTCAAACGCCACGCTGA > 7:298222/1‑149 GGCATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAACGTCACCGGCCTTTACGTTCAAACGCCACGCTGA > 7:144519/1‑149 GCATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAA < 6:43359/114‑1 GCATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAA > 5:43359/1‑114 GCATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTACGCCCCTGTTCGCGGGCAAGCCCGCTCCCACAGCATTGTGCGGCACATTCACAATCACTATCACAAACTCAACGTCACCGGCCTTTACGTTCAAACGCCACGCTGAC > 1:274436/1‑149 CATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAACGTCACCGGCCTTTACGTTCAAACGCCACGCTGA > 4:152125/1‑147 CCGAGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAACGTCACCGGCCTTTACGTTCAAACGCCACGCTGACAGCATC > 5:160508/1‑149 GCGCGGTGGATGGCGCGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAACGTCACCGGCCTTTACGTTCAAACGCCACGCTGACAGCATCCGCCTGCCCCCAG < 8:162959/148‑1 GATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAACGTCACCGGCCTTTACGTTCAAACGCCACTCTGACAGCATCCTCCTGCCCCCAGGCAATCTGC < 6:160508/149‑1 ATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAACGTCACCGGCCTTTACGTTCAAACGCCACGCTGACAGCATCCGCCTGCCCCCAGGCAATCTGCA < 8:298222/149‑1 GGCAAGCCCGTTACCACAGCATTGTGCGTCACATTCACTATCTCTATCACAACCTCAACGTCACCGGCCTTTCCGTTCAAACGCCACGCTGACAGCATCCGCCTGCCCCCAGGCAATCTGCATGGCCCGCAACCCATGCTCCAATAACT < 2:274436/149‑1 CCCGCTCCCACAGCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAACGTCACCGGCCTTTACGTTCAAACGCCACGCTGACAGCATCCGCCTGCCCCCAGGCAATCTGCATGGCCCGCAACCCATGCTCCAATAAC > 8:37117/1‑142 CCCGCTCCCACAGCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAACGTCACCGGCCTTTACGTTCAAACGCCACGCTGACAGCATCCGCCTGCCCCCAGGCAATCTGCATGGCCCGCAACCCATGCTCCAATAAC < 7:37117/142‑1 CCGCTCCCACAGCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAACGTCACCGGCCTTTACGTTCAAACGCCACGCTGACAGCATCCGCCTGCCCCCAGGCAATCTGCATGGCCCGCAACCCATGCTCCAATAACTGCCTGGT > 3:347078/1‑149 CCGCTCCCACAGCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAACGTCACCGGCCTTTACGTTCAAACGCCACGCTGACAGCATCCGCCTGCCCCCAGGCAATCTGCATGGCCCGCAACCCATGCTCCAATAACTGCCTGGT > 2:24833/1‑149 CGCTCCCACAGCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAACGTCACCGGCCTTTACGTTCAAACGCCACGCTGACAGCATCCGCCTGCCCCCAGGCAATCTGCATGGCCCGCAACCCATGCTCCAATAACTGCCTGGTT < 2:310969/149‑1 aCACCGCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAACGTCACCGGCCTTTACGTTCAAACGCAACGCTGACAGCATCCGCCTGCCCCCAGGCAATCTGCATGGCCCGCAACCCATGCTCCAATAACTGCCTGGTTTCATC < 4:346164/148‑1 CCACAGCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAACGTCACCGGCCTTTACGTTCAAACGCCACGCTGACAGCATCCGCCTGCCCCCAGGCAATCTGCATGGCCCGCAACCCATGCTCCAATAACTGCCTGGTTTCTTC < 4:351727/149‑1 CCACAGCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAACGTCACCGGCCTTTACGTTCAAACGCCACGCTGACAGCATCCGCCTGCCCCCAGGCAATCTGCATGGCCCGCAACCCATGCTCCAATAACTGCCTGGTTTCTTC < 6:268328/149‑1 CCACAGCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAACGTCACCGGCCTTTACGTTCAAACGCCACGCTGACAGCATCCGCCTGCCCCCAGGCAATCTGCATGGCCCGCAACCCATGCTCCAATAACTGCCTGGTTTCTTC < 6:100410/149‑1 CCACAGCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAACGTCACCGGCCTTTACGTTCAAACGCCACGCTGACAGCATCCGCCTGCCCCCAGGCAATCTGCATGGCCCGCAACCCATGCTCCAATAACTGCCTGGTTTCTT < 8:338882/148‑1 CCACAGCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAACGTCACCGGCCTTTACGTTCAAACGCCACGCTGACAGCATCCGCCTG‑CCCCAGGCAATCTGCATGGCCCGCAACCCATGCTCCAATAACTGCCTGGTTTCTTCG > 4:170069/1‑149 CACAGCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAACGTCACCGGCCTTTACGTTCAAACGCCACGCTGACAGCATCCGCCTGCCCCCAGGCAATCTGCATGGCCCGCAACCCATGCTCCAATAACTGCCTGGTTTCTTCG > 8:67115/1‑149 ACAGCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAACGTCACCGGCCTTTACGTTCAAACGCCACGCTGACAGCATCCGCCTGCCCCCAGGCAATCTGCATGGCCCGCAACCCATGCTCCAATAACTGCCTGGTTTCTTCGT > 2:313248/1‑149 CAGCATGGTGCGGCACCTTCACAATCTCTATCACAAACTCACCGTCCCCGGCCTTTCCGTTCCAACGCCACGCTGACAGCATCCGCCTGCCCCCAGGCAATCTGCATGGCCCGCAACCCCTGCTCCAATAACTGCCTGGTTTCTTCGTC < 4:105640/149‑1 AGCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAACGTCACCGGCCTTTACGTTCAAACGCCACGCTGACAGCATCCGCCTGCCCCCAGGCAATCTGCATGGCCCGCAACCCATGCTCCAATAACTGCCTGGTTTCTTCGTCC < 2:137465/149‑1 GTCAGCGTGGCGTTTGAACGTAAAGGCCGGTGACGTTGAGTTTGTGATAGAGATTGTGAATGTGCCGCACAATGCTGTGGGAGCGGGCATGCCCGCGAAGAATATAGCGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCAAGCCCGCTCCCACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4856256‑4856096 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgctcccacagCATTGTGCGGCACATTCACAATCTCTATCACAAACTCAACGTCACCGGCCTTTACGTTCAAACGCCACGCTGACAGCATCCGCCTGCCCCCAGGCAATCTGCATGGCCCGCAACCCATGCTCCAATAACTGCCTGGTTTCTTCGTCC > NC_002947/4856183‑4856329 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |