New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4990473	54 (0.900)	5 (0.090)	5/250	NT	8.4%	coding (659/1242 nt)	PP_4399	glutamine synthetase
	?	NC_002947	= 4990503	58 (1.020)					coding (629/1242 nt)	PP_4399	glutamine synthetase

GTTGACGTTGGGTGCAAACAGGGCGGTGAAGTCGGCCATGCACGCCTGCAACCCGCCGATGAAATGGTGGAAGGTTTCTGTCGGCAGGCCTTGCTCGTCACTGAATACGTTACGGCCGCTGCCGGCCTCGACCAGGCTCTGGTGAATGTGCATGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4990319‑4990473 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcatggCCAAGCCGCTGGCGCGTACGCCCGGCAGTTCCATGCACATTCACCAGAGCCTGGTCGAGGCCGGCAGCGGCCGTAACGTATTCAGTGACGAGCAAGGCCTGCCGACAGAAACCTTCCACCATTTCATCGGCGGGTTGCAGGCGT  <  NC_002947/4990503‑4990360                                                                                                                                                                                                                                                                                                             GTTGACGTTGGGTGCAAACAGGGCGGTGAAGTCGGCCATGCACGCCTGCAACCCGCCGATGAAATGGTGGAAGGTTTCTGTCGGCAGGCCTTGCTCGTCACTGAATACGTTACGGCCGCTGCCGGCCTCGACCAGGCTCTGGTGAATGT                                                                                                                                                        >  5:45946/1‑149  TTGACGTTGGGTGCAAACAGGGCGGTGAAGTCGGCCATGCACGCCTGCAACCCGCCGATGAAATGGTGGAAGGTTTCTGTCGGCAGGCCTTGCTCGTCACTGAATACGTTACGGCCGCTGCCGGCCTCGACCAGGCTCTGGTGAATGT                                                                                                                                                        <  5:278244/148‑1    GACGTTGGGTGCAAACAGGGCGGTGAAGTCGGCCATGCACGCCTGCAACCCGCCGATGAAATGGTGGAAGGTTTCTGTCGGCAGGCCTTGCTCGTCACTGAATACGTTACGGCCGCTGCCGGCCTCGACCAGGCTCTGGTGAATGTGC                                                                                                                                                      <  3:142396/148‑1       GTTGGGTGCAAACAGGGCGGTGAAGTCGGCCATGCACGCCTGCAACCCGCCGATGAAATGGTGGAAGGTTTCTGTCGGCAGGCCTTGCTCGTCACTGAATACGTTACGGCCGCTGCCGGCCTCGACCAGGCTCTGGTGAATGTGCATGG                                                                                                                                                  <  3:317286/149‑1                           TGAAGTCGGCCATGCACGCCTGCAACCCGCCGATGAAATGGTGGAAGGTTTCTGTCGGCAGGCCTTGCTCGTCACTGAATACGTTACGGCCGCTGCCGGCCTCGACCAGGCTCTGGTGAATGTGCATGGCCAAGCCGCTGGCGCGTACG                                                                                                                              >  8:65098/1‑149                                TCGGCCATGCACGCCTGCAACCCGCCGATGAAATGGTGGAAGGTTTCTGTCGGCAGGCCTTGCTCGTCACTGAATACGTTACGGCCGCTGCCGGCCTCGACCAGGCTCTGGTGAATGTGCATGGCCAAGCCGCTGGCGCGTACGCCCGG                                                                                                                         >  3:357962/1‑149                                            GCCTGCAACCCGCCGATGAAATGGTGGAAGGTTTCTGTCGGCAGGCCTTGCTCGTCACTGAATACGTTACGGCCGCTGCCGGCCTCGACCAGGCTCTGGTGAATGTGCATGGCCAAGCCGCTGGCGCGTACGCCCGGCAGTTCCATGCA                                                                                                             <  7:65098/149‑1                                                 CAACCCGCCGATGAAATGGTGGAAGGTTTCTGTCGGCAGGCCTTGCTCGTCACTGAATACGTTACGGCCGCTGCCGGCCTCGACCAGGCTCTGGTGAATGTGCATGGCCAAGCCGCTGGCGCGTACGCCCGGCAGTTCCATGCACATT                                                                                                         <  5:198973/148‑1                                                   ACCCGCCGATGAAATGGTGGAAGGTTTCTGTCGGCAGGCCTTGCTCGTCACTGAATACGTTACGGCCGCTGCCGGCCTCGACCAGGCTCTGGTGAATGTGCATGGCCAAGCCGCTGGCGCGTACGCCCGGCAGTTCCATGCACATTCAC                                                                                                      <  4:357962/149‑1                                                                                                                                                      GCATGGCCAAGCCGCTGGCGCGTACGCCCGGCAGTTCCATGCACATTCACCAGAGCCTGGTCGAGGCCGGCAGCGGCCGTAACGTATTCAGTGACGAGCAAGGCCTGCCGACAGAAACCTTCCACCATTTCAT                   >  1:255409/1‑133                                                                                                                                                      GCATGGCCAAGCCGCTGGCGCGTACGCCCGGCAGTTCCATGCACATTCACCAGAGCCTGGTCGAGGCCGGCAGCGGCCGTAACGTATTCAGTGACGAGCAAGGCCTGCCGACAGAAACCTTCCACCATTTCAT                   <  2:255409/133‑1                                                                                                                                                       cagtGCCAAGCCTCGTGCGCGGACGCCCGGCAGTGCCATGCACATTCACCAGAGCCTGGTCGAGGCCGGCAGCGGCCGTACCGTATTCAGTGACGAGCAAGGCCTGCCGACAGAAACCTTCCACCATTTCATCGGCGGGTTGCAGGCGT  <  8:322737/145‑1                                                                                                                                                       CATGGCCAAGCCGCTGGCGCGTACGCCCGGCAGTTCCATGCACATTCACCCGAGCCTGGTCGAGGCCGGCAGCGGCCGTAACGTATTCAGTGACGAGCAAGGCCTGCCGACAGAAACCTTCCACCATTTCATCGGCGGGTTGCAGGCGT  <  4:254918/149‑1                                                                                                                                                                                                                                                                                                             GTTGACGTTGGGTGCAAACAGGGCGGTGAAGTCGGCCATGCACGCCTGCAACCCGCCGATGAAATGGTGGAAGGTTTCTGTCGGCAGGCCTTGCTCGTCACTGAATACGTTACGGCCGCTGCCGGCCTCGACCAGGCTCTGGTGAATGTGCATGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4990319‑4990473 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcatggCCAAGCCGCTGGCGCGTACGCCCGGCAGTTCCATGCACATTCACCAGAGCCTGGTCGAGGCCGGCAGCGGCCGTAACGTATTCAGTGACGAGCAAGGCCTGCCGACAGAAACCTTCCACCATTTCATCGGCGGGTTGCAGGCGT  <  NC_002947/4990503‑4990360

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.