| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5115116 = | 55 (0.910) | 4 (0.070) | 4/254 | NT | 6.6% | coding (670/861 nt) | PP_4500 | TrpH family protein |
| ? | NC_002947 | 5115188 = | 60 (1.040) | coding (598/861 nt) | PP_4500 | TrpH family protein | |||||
GCCGACGCTCGACGAAACCGTTGCCACGCTGAGGCAGTCCAATGCCTGGGTGAGCCTGGCGCATCCCATGCACTACGACCTGACCCGCAGCAAGCGCAGGCGGCTGATTGCCGACTATATTCAGGCAGGAGGGCAGGCGCTTGAAGTGGTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5115267‑5115116‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtcaGGTCGTAGTGCATGGGATGCGCCAGGCTCACCCAGGCATTGGACTGCCTCAGCGTGGCAACGGTTTCGTCGAGCGTCGGCCAGTGCTGCTTGACGTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTC > NC_002947/5115188‑5115332 GCCGACGCTCGACGAAACCGTTGCCACTCTGAGGCAGTCCAATGCCTGGGTGAGCCTGGCGCATCCCATGCACTACGACCTGACCCGCAGCAAGCGCAGGCGGCTGATTGCCGACTATATTCCGGCAGGAGGGCAGGCGCTTGAAGTG < 5:374596/148‑1GCCGACGCTCGACGAAACCGTTGCCACGCTGAGGCAGTCCAATGCCTGGGTGAGCCTGGCGCATCCCATGCACTACGACCTGACCCGCAGCAAGCGCAGGCGGCTGATTGCCGACTATATTCAGGCAGGAGGGCAGGCGCTTGAAGTG < 2:20904/148‑1GCCGACGCTCGACGAAACCGTTGCCACGCTGAGGCAGTCCAATGCCTGGGTGAGCCTGGCGCATCCCATGCACTACGACCTGACCCGCAGCAAGCGCAGGCGGCTGATTGCCGACTATATTCAGGCAGGAGGGCAGGCGCTTGAAGTG < 8:234580/148‑1 CCGACGCTCGACGAAACCGTTGCCACGCTGAGGCAGTCCAATGCCTGGGTGAGCCTGGCGCATCCCATGCACTACGACCTGACCCGCAGCAAGCGCAGGCGGCTGATTGCCGACTATATTCAGGCAGGAGGGCAGGCGCTTGAAGTGGT < 2:317833/149‑1 GACGCTCGACGAAACCGTTGCCACGCTGAGGCAGTCCAATGCCTGGGTGAGCCTGGCGCATCCCATGCACTACGACCTGACCCGCAGCAAGCGCAGGCGGCTGATTGCCGACTATATTCAGGCAGGAGGGCAGGCGCTTGAAGTGGTC > 3:20309/1‑148 CCTGACCCGCAGCAAGCGCAGGCGGCTGATTGCCGACTATATTCAGGCAGGAGGGCAGGCGCTTGAAGTGGTCAGGTCGTAGTGCATGGGATGCGCCAGGCTCACCCAGGCATTGGACTGCCTCAGCGTGGCAACGGTTTCGTCGAGCG > 2:90790/1‑149 CCCGCAGCAAGCGCAGGCGGCTGATTCCCGACTATATTCAGGCAGGAGGGCAGGCGCTTCAAGTGCTCAGGTCGTAGTGCATGGGATGCGCCAGGCTCCCCCAGGCAATGGACTGCCTCAGCGAGGCAACGGTTTCGACGACCGACGGC > 3:306657/1‑149 CCGACTATATTCAGGCAGGAGGGCAGGCGCTTGAAGTGGTCAGGTCGTAGTGCATGGGATGCGCCAGGCTCACCCAGGCATTGGACTGCCTCAGCGTGGCAACGGTTTCGTCGAGCGTCGGCCAGTGCTGCTTGACGTCGCCCAGCTT < 1:90790/148‑1 ACTATATTGAGGCAGGAGGGCAGGCGCTTGAAGTGGTCAGGTCGTAGTGCATGGGATGCGCGAGGCTCACGCTGGCATTGGACTGCCTCAGCGTGGCAACGGTTTCGTCGAGCGTCGGCCAGTGCTGCTTGACGTCGCCCAGCTTGCCG < 4:306657/149‑1 GTCAGGTCGTAGTGCATGGGATGCGCCAGGCTCACCCAGGCATTGGACTGCCTCAGCGTGGCAACGGTTTCGTCGAGCGTCGGCCAGTGCTGCTTGACGTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTC < 6:287292/149‑1 GTCAGGTCGTAGTGCATGGGATGCGCCAGGCTCACCCAGGCATTGGACTGCCTCAGCGTGGCAACGGTTTCGTCGAGCGTCGGCCAGTGCTGCTTGACGTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTC < 6:66686/149‑1 TCAGGTCGTAGTGCATGGGATGCGCCTGGCTCACCCAGGCATTGGACTGCCTCAGCGTGGCAACGGTTTCGTCGAGCGTCGGCCAGTGCTGCTTGACGTCGCCCAGC < 1:267415/107‑1 TCAGGTCGTAGTGCATGGGATGCGCCAGGCTCACCCAGGCATTGGACTGCCTCAGCGTGGCAACGGTTTCGTCGAGCGTCGGCCAGTGCTGCTTGACGTCGCCCAGC > 2:267415/1‑107 GCCGACGCTCGACGAAACCGTTGCCACGCTGAGGCAGTCCAATGCCTGGGTGAGCCTGGCGCATCCCATGCACTACGACCTGACCCGCAGCAAGCGCAGGCGGCTGATTGCCGACTATATTCAGGCAGGAGGGCAGGCGCTTGAAGTGGTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5115267‑5115116‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtcaGGTCGTAGTGCATGGGATGCGCCAGGCTCACCCAGGCATTGGACTGCCTCAGCGTGGCAACGGTTTCGTCGAGCGTCGGCCAGTGCTGCTTGACGTCGCCCAGCTTGCCGGCGCCCAGCCACTTGCGAAACGCTTCACCACGGTC > NC_002947/5115188‑5115332 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |