New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5133434 = | 74 (1.230) | 4 (0.070) | 4/256 | NT | 5.5% | coding (516/1359 nt) | tolC | agglutination protein |
? | NC_002947 | 5133494 = | 67 (1.150) | coding (576/1359 nt) | tolC | agglutination protein |
GCTCGTCCGGGGCACGGCCAATCACACTGAAGAAGTTGGCCTCGGCATCGGCCAGGTCGACTTCGGCGGTGTCCAGGTTGTTTTCCGCCAGGGCGCGACGGGCGCGGGACTGGTCGAGGTCGGCGGTGCTGCCGACGCCGCGCTCGTTGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5133585‑5133434 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcCCT‑GGCGGAAAACAACCTGGACACCGCCGAAGTCGACCTGGCCGATGCCGAGGCCAACTTCTTCAGTGTGATTGGCCGTGCCCCGGACGAGCTGG > NC_002947/5133494‑5133588 GCTCGTCCGGGGCACGGCCAATCACACTGAAGAAGTTGGCCTCGGCATCGGCCAGGTCGACTTCGGCGGTGTCCAGGTTGTTTTCCGCCAGGGCGCGACGGGCGCGGGACTGGTCGAGGTCGGCGGTGCTGCCGACGCCGCGCTCGTTG < 1:229901/149‑1 GCTCGTCCGGGGCACGGCCAATCACACTGAAGAAGTTGGCCTCGGCATCGGCCAGGTCGACTTCGGCGGTGTCCAGGTTGTTTTCCGCCAGGGCGCGACGGGCGCGGGACTGGTCGAGGTCGGCGGTGCTGCCGACGCCGCGCTCGTTG > 8:312313/1‑149 TCGTCCGGGGCACGGCCAATCACACTGAAGAAGTTGGCCTCGGCATCGGCCAGGTCGACTTCGGCGGTGTCCAGGTTGTTTTCCGCCAGGGCGCGACGGGCGCGGGACTGGTCGAGGTCGGCGGTGCTGCCGACGCCGCGCTCGTTGCG > 6:286922/1‑149 GCGACGGGCGCGGGACTGGTCGAGGTCGGCGGTGCTGCCGACGCCGCGCTCGTTGCGCCCTAGGCGGAAAACAACCTGGACACCGCCGAAGTCGACCTGGCCGATGCCGAGGCCAACTTCTTCAGTGTGATTGGCCGTGCCCCGGAC > 1:108364/1‑147 CGACGGGCGCGGGACTGGTCGAGGTCGGCGGTGCTGCCGACGCCGCGCTCGTTGCGCCCT‑GGCGGAAAACAACCTGGACACCGCCGAAGTCGACCTGGCCGATGCCGAGGCCAACTTCTTCAGTGTGATTGGCCGTGCCCCGGACGAGC > 5:44174/1‑149 GACGGGCGCGGGACTGGTCGAGGTCGGCGGTGCTGCCGACGCCGCGCTCGTTGCGCCCT‑GGCGGAAAACAACCTGGACACCGCCGAAGTCGACCTGGCCGATGCCGAGGCCAACTTCTTCAGTGTGATTGGCCGTGCCCCGGACGAGCT > 4:151834/1‑149 GGGCGCGGGACTGGTCGAGGTCGGCGGTGCTGCCGACGCCGCGCTCGTTGCGCCCT‑GGCGGAAAACAACCTGGACACCGCCGAAGTCGACCTGGCCGATGCCGAGGCCAACTTCTTCAGTGTGATTGGCCGTGCCCCGGACGCGCTGG > 2:316433/1‑148 GCTCGTCCGGGGCACGGCCAATCACACTGAAGAAGTTGGCCTCGGCATCGGCCAGGTCGACTTCGGCGGTGTCCAGGTTGTTTTCCGCCAGGGCGCGACGGGCGCGGGACTGGTCGAGGTCGGCGGTGCTGCCGACGCCGCGCTCGTTGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5133585‑5133434 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcCCT‑GGCGGAAAACAACCTGGACACCGCCGAAGTCGACCTGGCCGATGCCGAGGCCAACTTCTTCAGTGTGATTGGCCGTGCCCCGGACGAGCTGG > NC_002947/5133494‑5133588 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |