New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5133434 =74 (1.230)4 (0.070) 4/256 NT 5.5% coding (516/1359 nt) tolC agglutination protein
?NC_002947 5133494 = 67 (1.150)coding (576/1359 nt) tolC agglutination protein

CCGCGCCTATTACACCCAGGCCGTCGCCCAGGATGTCGCCCTGCGTGCAGTCGAGGTCTACCTGGAAGTGCTCAAACGCCGTGAACTGGTGACCCTGGCCAAGAACAACCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCCGCGCCCGTCGCGCCCTGGCGGAAAACAACCTGGACACCGCCGAAGTCGACCTGGCCGATGCCGAGGCCAACTTCTTCAGTGTGATTGGCCGTGCCCC  >  NC_002947/5133287‑5133577
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ccGCGCCTATTACACCCAGGCCGTCGCCCAGGATGTCGCCCTGCGTGCAGTCGAGGTCTACCTGGAAGTGCTCAAACGCCGTGAACTGGTGACCCTGGCCAAGAACAACCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTgc                                                                                                                                                <  8:83079/149‑1 (MQ=255)
  gcgcCTATTACACCCAGGCCGTCGCCCAGGATGTCGCCCTGCGTGCAGTCGAGGTCTACCTGGAAGTGCCCACACGCCGTGAACTGGTGACCCTGGCCAAGAACAACCTGCAAGCTCACATGCGCGTCAACGATCAGATTGGCCTgcg                                                                                                                                               >  6:127802/1‑148 (MQ=255)
       tATTACACCCAGGCCGTCGCCCAGGATGTCGCCCTGCGTGCAGTCGAGGTCTACCTGGAAGTGCTCAAACGCCGTGAACTGGTGACCCTGGCCAAGAACAACCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGa                                                                                                                                         >  4:131511/1‑149 (MQ=255)
        aTTACACCCAGGCCGTCGCCCAGGATGTCGCCCTGCGTGCAGTCGAGGTCTACCTGGAAGTGCTCAAACGCCGTGAACTGGTGACCCTGGCCAAGAACAACCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAg                                                                                                                                        >  7:209122/1‑149 (MQ=255)
        aTTACACCCAGGCCGTCGCCCAGGATGTCGCCCTGCGTGCAGTCGAGGTCTACCTGGAAGTGCTCAAACGCCGTGAACTGGTGACCCTGGCCAAGAACAACCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAg                                                                                                                                        >  7:203604/1‑149 (MQ=255)
           acacCCAGGCCGTCGCCCAGGATGTCGCCCTGCGTGCAGTCGAGGTCTACCTGGAAGTGCTCAAACGCCGTGAACTGGTGACCCTGGCCAAGAACAACCTGCAAGCTCACCTGCGCGTCACCGATCAGATTGGCCTGCGCAACGAgcgc                                                                                                                                     >  5:313190/1‑149 (MQ=255)
           acacCCAGGCCGTCGCCCAGGATGTCGCCCTGCGTGCAGTCGAGGTCTACCTGGAAGTGCTCAAACGCCGTGAACTGGTGACCCTGGCCAAGAACAACCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAgcgc                                                                                                                                     >  7:291038/1‑149 (MQ=255)
             acCCAGGCCGTCGCCCAGGATGTCGCCCTGCGTGCAGTCGAGGTCTACCTGGAAGTGCTCAAACGCCGTGAACTGGTGACCCTGGCCAAGAACAACCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAgcgc                                                                                                                                     >  4:261883/1‑147 (MQ=255)
             acCCAGGCCGTCGCCCAGGATGTCGCCCTGCGTGCAGTCGAGGTCTACCTGGAAGTGCTCAAACGCCGTGAACTGGTGACCCTGGCCAAGAACAACCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAgcgc                                                                                                                                     <  3:261883/147‑1 (MQ=255)
              cccAGGCCGTCGCCCAGGATGTCGCCCTGCGTGCAGTCGAGGTCTACCTGGAAGTGCTCAAACGCCGTGAACCGGTGACCCTGGCCAAGAACAACCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCgcggc                                                                                                                                  >  5:362947/1‑149 (MQ=255)
               ccAGGCCGTCGCCCAGGATGTCGCCCTGCGTGCAGTCGAGGTCTACCTGGAAGTGCTCAAACGCCGTGAACTGGTGACCCTGGCCAAGAACAACCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCgcggcg                                                                                                                                 >  3:214194/1‑149 (MQ=255)
               ccAGGCCGTCGCCCAGGATGTCGCCCTGCGTGCAGTCGAGGTCTACCTGGAAGTGCTCAAACGCCGTGAACTGGTGACCCTGGCCAAGAACAACCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCgcggcg                                                                                                                                 >  1:208073/1‑149 (MQ=255)
                 aGGCCGTCGCCCAGGATGTCGCCCTGCGTGCAGTCGAGGTCTACCTGGAAGTGCTCAAACGCCGTGAACTGGTGACCCTGGCCAAGAACAACCTGCAAGGTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTc                                                                                                                               <  8:343549/149‑1 (MQ=255)
                   gCCGTCGCCCAGGATGTCGCCCTGCGTGCAGTCGAGGTCTACCTGGAAGTGCTCAAACGCCGTGAACTGGTGACCCTGGCCAAGAACAACCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCgg                                                                                                                             >  3:79612/1‑149 (MQ=255)
                    ccGTCGCCCAGGATGTCGCCCTGCGTGCAGTCGAGGTCTACCTGGAAGTGCTCAAACGCCGTGAACTGGTGACCCTGGCCAAGAACAACCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGgc                                                                                                                            <  6:2758/149‑1 (MQ=255)
                       tCGCCCAGGATGTCGCCCTGCGTGCAGTCGAGGTCTACCTGGAAGTGCTCAAACGCCGTGAACTGGTGACCCTGGCCAAGAACAACCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGgcagc                                                                                                                         <  5:323926/149‑1 (MQ=255)
                           ccAGGATGTCGCCCTGCGTGCAGTCGAGGTCTACCTGGAAGTGCTCAAACGCCGTGAACTGGTGACCCTGGCCAAGAACAACCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCAccg                                                                                                                     >  5:77679/1‑149 (MQ=255)
                            cAGGATGTCGCCCTGCGTGCAGTCGAGGTCTACCTGGAAGTGCTCAAACGCCGTGAAACTGGTGACCCTGGCCAAGAACAACCTGCAAGCTCACATGCGCGTCAACGATCAGATTGGCATGTGCAACGAGCGCGGCGTCGGAAGCAccg                                                                                                                     >  1:292662/1‑149 (MQ=255)
                                   tCGCCCTGCGTGCAGTCGAGGTCTACCTGGAAGTGCTCAAACGCCGTGAACTGGTGACCCTGGCCAAGAACAACCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTc                                                                                                             >  7:146219/1‑149 (MQ=255)
                                      cccTGCGTGCAGTCGAGGTCTACCTGGAAGTGCTCAAACGCCGTGAACTGGTGACCCTGGCCAAGAACAACCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGAc                                                                                                          >  7:214321/1‑149 (MQ=255)
                                        cTGCGTGCAGTCGAGGTCTACCTGGAAGTGCTCAAACGCCGTGAACTGGTGACCCTGGCCAAGAACAACCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGAc                                                                                                          >  7:338922/1‑147 (MQ=255)
                                             tGCAGTCGAGGTCTACCTGGAAGTGCTCAAACGCCGTGAACTGGTGACCCTGGCCAAGAACAACCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTccc                                                                                                   >  1:200385/1‑149 (MQ=255)
                                                     ccagcgcgtccggggcacggccaatcacactgaagaagttggcctcggcatcggccaggtcgacttcggcggtgtccaggttgttttccgccaggGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCCGCGccc                                                                                             >  2:316433‑M1/96‑148 (MQ=255)
                                                       gTCTACCTGGAAGTGCTCAAACGCCGTGAACTGGTGACCCTGGCCAAGAACAACCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCCGCGCCCGTcg                                                                                         >  6:94648/1‑149 (MQ=255)
                                                       agctcgtccggggcacggccaatcacactgaagaagttggcctcggcatcggccaggtcgacttcggcggtgtccaggttgttttccgccaggGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCCGCGCCCGTc                                                                                          >  4:151834‑M1/94‑149 (MQ=255)
                                                        tCTACCTGGAAGTGCTCAAACGCCGTGAACTGGTGAACCTGGCCAAGAACAACCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCCGCGCCCGTcgc                                                                                        <  4:373062/149‑1 (MQ=255)
                                                        gctcgtccggggcacggccaatcacactgaagaagttggcctcggcatcggccaggtcgacttcggcggtgtccaggttgttttccgccaggGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCCGCGCCCGTcg                                                                                         >  5:44174‑M1/93‑149 (MQ=255)
                                                           gtccggggcacggccaatcacactgaagaagttggcctcggcatcggccaggtcgacttcggcggtgtccaggttgttttccgcctaggGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCCGCGCCCGTcgc                                                                                        >  1:108364‑M1/90‑147 (MQ=255)
                                                           aCCTGGAAGTGCTCAAACGCCGTGAACTGGTGACCCTGGCCAAGAACAACCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCCGCGCCCGTCGCGcc                                                                                     >  1:40763/1‑149 (MQ=255)
                                                            ccTGGAAGTGCTCAAACGCCGTGAACTGGTGACCCTGGCCAAGAACAACCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCCGCGCCCGTCGCGcc                                                                                     <  8:209122/148‑1 (MQ=255)
                                                            ccTGGAAGTGCTCAAACGCCGTGAACTGGTGACCCTGGCCAAGAACAACCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCCGCGCCCGTCGCGcc                                                                                     <  8:203604/148‑1 (MQ=255)
                                                            ccTGGAAGTGCTCAAACGCCGTGAACTGGTGACCCTGGCCAAGAACAACCTGCAAGCTCACCTGCGCGTCAACGAGCAGATTGGCCTGTGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCCGCGCCCGTCGCGccc                                                                                    <  7:55083/149‑1 (MQ=255)
                                                             cTGGAAGTGCTCAAACGCCGTGAACTGGTGACCCTGGCCAAGAACAACCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCCGCGCCCGTCGCGCCCt                                                                                   >  7:241157/1‑149 (MQ=255)
                                                                gAAGTGCTCAAACGCCGTGAACTGGTGACCCTGGCCAAGAACAACCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCCGCGCCCGTCGCGCCCTg                                                                                  <  8:241157/147‑1 (MQ=255)
                                                                   gTGCTCAAACGCCGTGAACTGGTGACCCTGGCCAAGAACAACCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCCGCGCCCGTCGCGCCCTGGCGGa                                                                             <  5:94648/149‑1 (MQ=255)
                                                                    tGCTCAAACGCCGTGAACTGGTGACCCTGGCCAAGAACAACCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCCGCGCCCGTCGCGCCCTGGCGGaa                                                                            <  3:131511/149‑1 (MQ=255)
                                                                     gCTCAAACGCCGTGAACTGGTGACCCTGGCCAAGAACAACCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCCGCGCCCGTCGCGCCCTGGCGGaa                                                                            >  8:292190/1‑148 (MQ=255)
                                                                      cTCAAACGCCGTGAACTGGTGACCCTGGCCAAGAACAACCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCCGCGCCCGTCGCGCCCTGGCGGaaa                                                                           <  4:214194/148‑1 (MQ=255)
                                                                      cTCAAACGCCGTGAACTGGTGACCCTGGCCAAGAACAACCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCGCAGCGTCGGCAGCACCGCCGACCTCGACCAGTCCCGCGCCCGTCGCGCCCTGGCGGaaa                                                                           >  4:115379/1‑148 (MQ=255)
                                                                      cTCAAACGCCGTGAACTGGTGACCCTGGCCAAGAACAACCTGCAAGCTCACCTGCGCGTCAACGATAAGATTGGACTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCCGCGCCCGTCGCGCCCTGGCGGaaaa                                                                          >  7:312313/1‑149 (MQ=255)
                                                                      cTCAAACGCCGTGAACCGGTGACCCTGGCCAAGAACAACCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCCGCGCCCGTCGCGCCCTGGCGGaaaa                                                                          <  6:362947/149‑1 (MQ=255)
                                                                       tCAAACGCCGTGAACTGGTGACCCTGGCCAAGAACAACCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCCGCGCCCGTCGCGCCCTGGCGGaaaa                                                                          >  4:325557/1‑148 (MQ=255)
                                                                       tCAAACGCCGTGAACTGGTGACCCTGGCCAAGAACAACCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCCGCGCCCGTCGCGCCCTGGCGGaaaa                                                                          >  1:321878/1‑148 (MQ=255)
                                                                       tCAAACGCCGTGAACTGGTGACCCTGGCCAAGAACAACCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCCGCGCCCGTCGCGCCCTGGCGGaaaa                                                                          >  4:126702/1‑148 (MQ=255)
                                                                         aaaCGCCGTGAACTGGTGACCCTGGCCAAGAACAACCTGCAAGCTCACCTGCGCGTCAACTATCAGATTGGCCTgcg                                                                                                                                               <  6:92005/77‑1 (MQ=255)
                                                                         aaaCGCCGTGAACTGGTGACCCTGGCCAAGAACAACCTGCAAGCTCACCTGCGCGGCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCACTCCCGCGCCCGTCGCGCCCTGGCGGAAaac                                                                         <  2:186173/147‑1 (MQ=255)
                                                                            cgacGTGAACTGGTTACGCTCGCCAAGAACATCCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCGCGACCAGTCCCGCGCCCGTCGCGCCCTGGCGGAAAACAACCt                                                                    <  7:82975/146‑1 (MQ=255)
                                                                             gCCGTGAACTGGTGACCCTGGCCAAGAACAACCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCCGCGCCCGTCGCGCCCTGGCGGAAAACAACCTg                                                                   <  4:79612/149‑1 (MQ=255)
                                                                             gCCGTGAACTGGTGACCCTGGCCAAGAACAACCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCCGCGCCCGTCGCGCCCTGGCGGAAAACAACCTg                                                                   <  6:77679/149‑1 (MQ=255)
                                                                               cagttaaCTGTTGACGCTTGCCAAGAAGAACGTGCAATCTCACCTGCTCGTCAACGATCAGATTGTCCTGCGCAACGAGCGCGGCGTCGGCAGGAGCGTCGACCTCGACCAGTCACGCGGCCGTAGCGCCGTGGCGGAAATCAAACTg                                                                   <  6:384287/143‑1 (MQ=255)
                                                                                gTGAACTGGTGACCCTGGCCAAGAACAACCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCCGCGCCCGTCGCGCCCTGGCGGAAAACAACCTGGa                                                                 >  1:64117/1‑148 (MQ=255)
                                                                                    aaCTGGTGACCCTGGCCAAGAACAACCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCCGCGCCCGTCGCGCCCTGGCGGAAAACACCCTGGCCAcc                                                             >  2:312703/1‑149 (MQ=255)
                                                                                      cTGGTGACCCTGGCCAAGAACAACCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCCGCGCCCGTCGCGCCCTGGCGGAAAACAACCTGGACAccgc                                                           <  2:321878/149‑1 (MQ=255)
                                                                                       tGGTGACCCTGGCCAAGAACAACCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCCGCGCCCGTCGCGCCCTGGCGGAAAACAACCTGGACAccgcc                                                          >  3:138420/1‑149 (MQ=255)
                                                                                         ttGACCCTGGCCAAGAACAACCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCCGCGCCCGTCGCGCCCTGGCGGAAAACAACCTGGACAccgcc                                                          <  8:146219/146‑1 (MQ=255)
                                                                                         gTGACCCTGGCCAAGAACAACCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCcgc                                                                                                 <  8:244003/108‑1 (MQ=255)
                                                                                         gTGACCCTGGCCAAGAACAACCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCcgc                                                                                                 >  7:244003/1‑108 (MQ=255)
                                                                                          tGACCCTGGCCAAGAACAACCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCCGCGCCCGTCGCGCCCTGGCGGAAAACAACCTGGACACCGCCGaa                                                       <  2:64117/149‑1 (MQ=255)
                                                                                                tGGCCAAGAACAACCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCCGCGCCCGTCGCGCCCTGGCGGAAAACAACCTGGACACCGCCGAAGTCGAc                                                 >  8:125147/1‑149 (MQ=255)
                                                                                                tGGCCAAGAACAACCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCCGCGCCCGTCGCGCCCTGGCGGAAAACAACCTGGACACCGCCGAAGTCGAc                                                 >  7:339/1‑149 (MQ=255)
                                                                                                  gCCAAGAACAACCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCCGCGCCCGTCGCGCCCTGGCGGAAAACAACCTGGACACCGCCGAAGTCGAc                                                 <  8:214321/147‑1 (MQ=255)
                                                                                                    cAAGAACAACCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCCGCGCCCGTCGCGCCCTGGCGGAAAACAACCTGGACACCGCCGAAGTCGACCTgg                                             >  5:248230/1‑149 (MQ=255)
                                                                                                    cAAGAACAACCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCCGCGCCCGTCGCGCCCTGGCGGAAAACAACCTGGACACCGCCGAAGTCGACCTgg                                             >  2:133799/1‑149 (MQ=255)
                                                                                                    cAAGAACAACCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCCGCGCCCGTCGCGCCCTGGCGGAAAACAACCTGGACAACGCCGAAGTCGACCTgg                                             >  5:206134/1‑149 (MQ=255)
                                                                                                     aaGAACAACCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCCGCGCCCGTCGCGCCCTGGCGGAAAACAACCTGGACACCGCCGAAGTCGACCTGGc                                            >  7:294230/1‑149 (MQ=255)
                                                                                                      aGAACAACCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCCGCGCCCGTCGCGCCCTGGCGGAAAACAACCTGGACACCGCCGAAGTCGACCTGGcc                                           >  4:161052/1‑149 (MQ=255)
                                                                                                        aacaacCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCCGCGCCCGTCGCGCCCTGGCGGAAAACAACCTGGACACCGCCGAAGTCGACCTGGCCGa                                         >  6:133029/1‑149 (MQ=255)
                                                                                                          caacCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCCgcgc                                                                                               >  7:183322/1‑93 (MQ=255)
                                                                                                          caacCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCCgcgc                                                                                               <  8:183322/93‑1 (MQ=255)
                                                                                                              cTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCCGCGCCCGTCGCGCCCTGGCGGAAAACAACCTGGACACCGCCGAAGTCGACCTGGCCGATGCCGa                                   <  7:292190/149‑1 (MQ=255)
                                                                                                                    gCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCCGCGCCCGTCGCGCCCTGGCGGAAAACAACCTGGACACCGCCGAAGTCGACCTGGCCGATGCCGAGGCCaa                             <  1:133799/149‑1 (MQ=255)
                                                                                                                      tCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCCGCGCCCGTCGCGCCCTGGCGGAAAACAACCTGGACACCGCCGAAGTCGACCTGGCCGATGCCGAGGCCAAct                           >  3:36792/1‑149 (MQ=255)
                                                                                                                          cTGCGCGTCAACGATCAGATTGGCCTGTGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCCGCGCCCGTCGCGCCCTGGCGGAAAACAACCTTGACACCGCCGAAGTCGACCTGGCCGATGCCGAGGCCAActtctt                       <  2:292662/149‑1 (MQ=255)
                                                                                                                          cTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCCGCGCCCGTCGCGCCCTGGCGGAAAACAACCTGGACACCGCCGAAGTCGACCTGGCCGATGCCGAGGCCAActtctt                       <  8:294230/149‑1 (MQ=255)
                                                                                                                           tGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCCGCGCCCGTCGCGCCCTGGCGGAAAACAACCTGGACACCGCCGAAGTCGACCTGGCCGATGCCGAGGCCAActtctt                       >  1:128711/1‑148 (MQ=255)
                                                                                                                             cgcgTCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCCGCGCCCGTCGCGCCCTGGCGGAAAACAACCTGGACACCGCCGAAGTCGACCTGGCCGATGCCGAGGCCAActtctt                       <  2:128711/146‑1 (MQ=255)
                                                                                                                             cgcgTCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCCGCGCCCGTCGCGCCCTGGCGGAAAACAACCTGGACACCGCCGAAGTCGACCTGGCCGATGCCGAGGCCAACttcttc                      <  1:140769/147‑1 (MQ=255)
                                                                                                                                     cGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCCGCGCCCGTCGCGCCCTGGCGGAAAACAACCTGGACACCGCCGAAGTCGACCTGGCCGATGCCGAGGCCAACTTCTTCAGTGTGATTg            <  6:313190/149‑1 (MQ=255)
                                                                                                                                      gATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCCGCGCCCGTCGCGCCCTGGCGGAAAACAACCTGGACACCGCCGAAGTCGACCTGGCCGATGCCGAGGCCAACTTCTTCAGTGTGATTgg           <  7:125147/149‑1 (MQ=255)
                                                                                                                                           gATTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGCCCTCGACCAGTCCCGCGCCCGTCGCGCCCTGGCGGAAAACAACCTGGACACCGCCGAAGTCGACCTGGCCGATGCCGAGGCCAACTTCTTCAGTGTGATTGGCCGTg      >  5:286922/1‑149 (MQ=255)
                                                                                                                                            aTTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCCGCGCCCGTCGCGCCCTGGCGGAAAACAACCTGGACACCGCCGAAGTCGACCTGGCCGATGACGAGGCCAACTTCTTCAGTTTGATTGGCCGTGc     <  4:36792/149‑1 (MQ=255)
                                                                                                                                                gCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCCGCGCCCGTCGCGCCCTGGCGGAAAACAACCTGGACACCGCCGAAGTCGACCTGGCCGATGCCGAGGCCAACTTCTTCAGTGTGATTGGCCGTGcccc  <  5:287300/148‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                               
CCGCGCCTATTACACCCAGGCCGTCGCCCAGGATGTCGCCCTGCGTGCAGTCGAGGTCTACCTGGAAGTGCTCAAACGCCGTGAACTGGTGACCCTGGCCAAGAACAACCTGCAAGCTCACCTGCGCGTCAACGATCAGATTGGCCTGCGCAACGAGCGCGGCGTCGGCAGCACCGCCGACCTCGACCAGTCCCGCGCCCGTCGCGCCCTGGCGGAAAACAACCTGGACACCGCCGAAGTCGACCTGGCCGATGCCGAGGCCAACTTCTTCAGTGTGATTGGCCGTGCCCC  >  NC_002947/5133287‑5133577

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.