| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5207127 | 49 (0.810) | 4 (0.070) | 4/254 | NT | 7.7% | coding (59/594 nt) | PP_4588 | nitroreductase family oxidoreductase |
| ? | NC_002947 | = 5207157 | 49 (0.850) | coding (89/594 nt) | PP_4588 | nitroreductase family oxidoreductase | |||||
GTCTAGAGCCTGGCCTTCGGCAAAGCCAGACCGCTTGTCAGTCGCGACGGCACGCAGTAGCGTGCGCTTTTCCCGTCCGTTCGCAGGAGCCGCCATGAGCGCCAACCCCCGCATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5206975‑5207127‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctgATCGGCTCGGCGGTGAAGGCGCGTGGCGACCAGCGGTTGATGAACTGCTCGTTGATGGCGTAATCGGCAATGCGGGGGTTGGCGCTCATGGCGGCTCCTGCGAACGGACGGGAAAAGCGCACGCTACTGCGTGCCGTCGCGACTGA < NC_002947/5207157‑5207012 GTCTAGAGCCTGGCCTTCGGCAAAGCCAGACCGCTTGTCAGTCGCGATGGCACGCAGTAGCGTGCGCTTTTCCCGTCCGTTCGCAGGAGCCGCCATGAGCGCCAACCCCCGCATTGCCGATTACGCCATCAACGAGCAGTTCATCAACC < 5:214483/149‑1GTCTAGAGCCTGGCCTTCGGCAAAGCCAGACCGCTTGTCAGTCGCGACGGCACGCAGTAGCGTGCGCTTTTCCCGTCCGTTCGCAGGAGCCGCCATGAGCGCCAACCCCCGCATTGCCGATTACGCCATCAACGAGCAGTTCATCAACC > 3:55705/1‑149 GAGCCTGGCCTTCGGCAAAGCCAGACCGCTTGTCAGTCGCGACGGCACGCAGTAGCGTGCGCTTTTCCCGTCCGTTCGCAGGAGCCGCCATGAGCGCCAACCCCCGCATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCT > 5:170019/1‑147 GAGCCTGGCCTTCGGCAAAGCCAGACCGCTTGTCAGTCGCGACGGCACGCAGTAGCGTGCGCTTTTCCCGTCCGTTCGCAGGAGCCGCCATGAGCGCCAACCCCCGCATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCT < 5:337491/147‑1 GAGCCTGGCCTTCGGCAAAGCCAGACCGCTTGTCAGTCGCGACGGCACGCAGTAGCGTGCGCTTTTCCCGTCCGTTCGCAGGAGCCGCCATGAGCGCCAACCCCCGCATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCT < 6:170019/147‑1 GTCGCGACGGCACGCAGTAGCGTGCGCTTTTCCCGTCCGTTCGCAGGAGCCGCCATGAGCGCCAACCCCCGCATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGATCGGCTCGGCGGTGAAGGCGCGTGGCGACCAGCGG < 3:5334/149‑1 CGACGGCACGCAGTAGCGTGCGCTTTTCCCGTCCGTTCGCAGGAGCCGCCATGAGCGCCAACCCCCGCATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGATCGGCTCGGCGGTGAAGGCGCGTGGCGACCAGCGGTTGA < 3:264098/149‑1 CCCGTCCGTTCGCAGGAGCCGCCATGAGCGCCAACCCCCGCATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGATCGGCTCGGCGGTGAAGGCGCGTGGCGACCAGCGGTTG > 5:316166/1‑121 CCCGTCCGTTCGCAGGAGCCGCCATGAGCGCCAACCCCCGCATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTGATCGGCTCGGCGGTGAAGGCGCGTGGCGACCAGCGGTTG < 6:316166/121‑1 CGCTGATCGGCTCGGCGGTGAAGGCGCGTGGCGACCAGCGGTTGATGAACTGCTCGTTGATGGCGTAATCGGCAATGCGGGGGTTGGCGCTCATGGCGGCTCCTGCGAACGGACGGGAAAAGCGCACGCTACTGCGTGCCGTCGCGA < 8:84573/147‑1 GCTGATCGGCTCGGCGGTGAAGGCGCGTGTCGACCAGCGGTTGATGAACTGCTCGTTGATCGCGTAATCGGCAATGCGGGGGTTGGCGCTCATGGCGGCTCCTGCGAACGGACGGGAAAAGCGCACGCTACTGCGTGCCGTCGCGACT > 3:228279/1‑148 GCTGATCGGCTCGGCGGTGAAGGCGCGTGGCGACCAGCGGTTGATGAACTGCTCGTTGATGGCGTAATCGGCAATGCGGGGGTTGGCGCTCATGGCGGCTCCTGCGAACGGACGGGAAAAGCGCACGCTACTGCGTGCCGTCGCGACTG > 4:55705/1‑149 CTGATCGGCTCGGCGGTGAAGGCGCGTGGCGACCAGCGGTTGATGAACTGCTCGTTGATGGCGTAATCGGCAATGCGGGGGTTGGCGCTCATGGCGGCTCCTGCGAACGGACGGGAAAAGCGCACGCTACTGCGTGCCGTCGCGACTGA > 6:209008/1‑149 GTCTAGAGCCTGGCCTTCGGCAAAGCCAGACCGCTTGTCAGTCGCGACGGCACGCAGTAGCGTGCGCTTTTCCCGTCCGTTCGCAGGAGCCGCCATGAGCGCCAACCCCCGCATTGCCGATTACGCCATCAACGAGCAGTTCATCAACCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5206975‑5207127‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctgATCGGCTCGGCGGTGAAGGCGCGTGGCGACCAGCGGTTGATGAACTGCTCGTTGATGGCGTAATCGGCAATGCGGGGGTTGGCGCTCATGGCGGCTCCTGCGAACGGACGGGAAAAGCGCACGCTACTGCGTGCCGTCGCGACTGA < NC_002947/5207157‑5207012 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |