| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5296388 = | 69 (1.150) | 4 (0.070) | 4/250 | NT | 5.7% | coding (975/1272 nt) | TpbB | diguanylate cyclase |
| ? | NC_002947 | 5296425 = | 68 (1.190) | coding (938/1272 nt) | TpbB | diguanylate cyclase | |||||
GCGCCAGCAGGACCACCTGGCAGTGCTGTTCCTCGACAGCGACCACTTCAAGCAGATCAACGACACCCTCGGCCACGCCGTGGGTGACGAGGTATTGATCAGCGTGGCCGAACGTGTGCGCGCCCAGCTGCGCGAGCAAGACCTGGTGGCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5296541‑5296388‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcgcACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATCTGCTTGAAGTGGTCGCTGTCGAGGAACAGCACTGCCAGGTGGTCCTGCTGGCGCGCCGCATTTCGCACGCTGCGGCTCAGGCGCC > NC_002947/5296425‑5296572 GCGCCAGCAGGACCACCTGGCAGTGCTGTTCCTCGACAGCGACCACTTCAAGCAGATCAACGACACCCTCGGCCACGCCGTGGGTGACGAGGTATTGATCAGCGTGGCCGAACGTGTGCGCGCCCAGCTGCGCGAGCAAGACCTGGTGG < 6:122729/149‑1 CAGCAGGACCACCTGGCAGTGCTGTTCCTCGACAGCGACCACTTCAAGCAGATCAACGACACCCTCGGCCACGCCGTGGGTGACGAGGTATTGATCAGCGTGGCCGAACGTGTGCGCGCCCAGCTGCGCGAGCAAGACCTGGTG > 5:309541/1‑144 CAGCAGGACCACCTGGCAGTGCTGTTCCTCGACAGCGACCACTTCAAGCAGATCAACGACACCCTCGGCCACGCCGTGGGTGACGAGGTATTGATCAGCGTGGCCGAACGTGTGCGCGCCCAGCTGCGCGAGCAAGACCTGGTG < 6:309541/144‑1 AGCAGGACCACCTGGCAGTGCTGTTCCTCGACAGCGACCACTTCAAGCAGATCAACGACACCCTCGGCCACGCCGTGGGTGACGAGGTATTGATCAGCGTGGCCGAACGTGTGCGCGCCCAGCTGCGCGAGCAAGACCTGGTGGCGCGC > 8:182712/1‑149 CCTCGGCCACGCCGTGGGTGACGAGGTATTGATCAGCGTGGCCGAACGTGTGCGCGCCCAGCTGCGCGAGCAAGACCTGGTGGCGCGC < 5:115155/88‑1 CCTCGGCCACGCCGTGGGTGACGAGGTATTGATCAGCGTGGCCGAACGTGTGCGCGCCCAGCTGCGCGAGCAAGACCTGGTGGCGCGC > 6:115155/1‑88 GTGTGCGCGCCCAGCTGCGCGAGCAAGACCTGGTGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATCTGCTTGAAGT > 7:266590/1‑114 GTGTGCGCGCCCAGCTGCGCGAGCAAGACCTGGTGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATCTGCTTGAAGT < 8:266590/114‑1 TGTGCGCGCCCAGCTGCGCGAGCAAGACCTGGTGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTG < 5:170374/84‑1 TGTGCGCGCCCAGCTGCGCGAGCAAGACCTGGTGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTG > 6:170374/1‑84 GGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATCTGCTTGAAGTGGTCGCTGTCGAGGAACAGCACTGCCAGGTGGTCCTGCTGGCGCGCCGCATTTCGCACGCTGCGGCTCA < 2:34203/149‑1 GCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATCTGCTTGAAGTGGTCGCTGTCGAGGAACAGCACTGCCAGGTGGTCCTGCTGGCGCGCCGCATTTCGCACGCTGCGGCTCAGGCGC > 5:199922/1‑149 CACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATCTGCTTGAAGTGGTCGCTGTCGAGGAACAGCACTGCCAGGTGGTCCTGCTGGCGCGCCGCATTTCGCACGCTGCGGCTCAGGCGCC < 4:231680/149‑1 GCGCCAGCAGGACCACCTGGCAGTGCTGTTCCTCGACAGCGACCACTTCAAGCAGATCAACGACACCCTCGGCCACGCCGTGGGTGACGAGGTATTGATCAGCGTGGCCGAACGTGTGCGCGCCCAGCTGCGCGAGCAAGACCTGGTGGCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5296541‑5296388‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcgcACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATCTGCTTGAAGTGGTCGCTGTCGAGGAACAGCACTGCCAGGTGGTCCTGCTGGCGCGCCGCATTTCGCACGCTGCGGCTCAGGCGCC > NC_002947/5296425‑5296572 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |