New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5296388 =	69 (1.150)	4 (0.070)	4/250	NT	5.7%	coding (975/1272 nt)	TpbB	diguanylate cyclase
	?	NC_002947	5296425 =	68 (1.190)					coding (938/1272 nt)	TpbB	diguanylate cyclase

TCCAGTTGCACCGGCAGCTCCATGCTGGCAACGATCTTCTCGGCAATGTGTTCGGCATCCTTGCGCGTATGCAAAGGCGTCAACAACACGGCAAACTCGTCGCCCCCCAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATCTGCTTGAAGTGGTCGCTGTCGAGGAACAGCACTGCCAGGTGGTCCTGCTGGCGCGCCGCATTTCGCACGCTGCGGCTCAGGCGCC  >  NC_002947/5296278‑5296572                                                                                                                                                     |                                                                                                                                                    tCCAGTTGCACCGGCAGCTCCATGCTGGCAACGATCTTCTCGGCAATGTGTTCGGCATCCTTGCGCGTATGCAAAGGCGTCAACAACACGGCAAACTCGTCGCCCCCCAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGca                                                                                                                                                     <  2:223330/148‑1 (MQ=255)   cAGTTGCACCGGCAGCTCCATGCTGGCAACGATCTTCTCGGCAATGTGTTCGGCATCCTTGCGCGTATGCAAAGGCGTCAACAACACGGCAAACTCGTCGCCCCCCAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCacac                                                                                                                                                  >  4:178262/1‑149 (MQ=255)     gTTGCACCGGCAGCTCCATGCTGGCAACGATCTTCTCGGCAATGTGTTCGGCATCCTTGCGCGTATGCAAAGGCGTCAACAACACGGCAAACTCGTCGCCCCCCAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGt                                                                                                                                                >  8:251406/1‑149 (MQ=255)     gTTGCACCGGCAGCTCCATGCTGGCAACGATCTTCTCGGCAATGTGTTCGGCATCCTTGCGCGTATGCAAAGGCGTCAACAACACGGCAAACTCGTCGCCCCCCAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGt                                                                                                                                                >  3:89523/1‑149 (MQ=255)         cACCGGCAGCTCCATGCTGGCAACGATCTTCTCGGCAATGTGTTCGGCATCCTTGCGCGTATGCAAAGGCGTCAACAACACGGCAAACTCGTCGCCCCCCAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCg                                                                                                                                             <  1:161096/148‑1 (MQ=255)         cACCGGCAGCTCCATGCTGGCAACGATCTTCTCGGCAATGTGTTCGGCATCCTTGCGCGTATGCAAAGGCGTCAACAACACGGCAAACTCGTCGCCCCCCAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCg                                                                                                                                             <  2:373984/148‑1 (MQ=255)         cACCGGCAGCTCCATGCTGGCAACGATCTTCTCGGCAATGTGTTCGGCATCCTTGCGCGTATGCAAAGGCGTCAACAACACGGCAAACTCGTCGCCCCCCAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCg                                                                                                                                             <  5:116012/148‑1 (MQ=255)         cACCGGCAGCTCCATGCTGGCAACGATCTTCTCGGCAATGTGTTCGGCATCCTTGCGCGTATGCAAAGGCGTCAACAACACGGCAAACTCGTCGCCCCCCAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCg                                                                                                                                             <  5:156793/148‑1 (MQ=255)          aCCGGCAGCTCCATGCTGGCAACGATCTTCTCGGCAATGTGTTCGGCATCCTTGCGCGTATGCAAAGGCGTCAACAACACGGCAAACTCGTCGCCCCCCAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGc                                                                                                                                           <  3:41938/149‑1 (MQ=255)             ggCAGCTCCATGCTGGCAACGATCTTCTCGGCAATGTGTTCGGCATCCTTGCGCGTATGCAAAGGCGTCAACAACACGGCAAACTCGTCGCCCCCCAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCAc                                                                                                                                        <  3:309790/149‑1 (MQ=255)                     cATGCTGGCAACGATCTCCTCGGCAATGTGTTCGGCATCCTTGCGCGTATGCAAAGGCGTCAACAACACGGCAAATTCGTCGCCCCCCAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGAt                                                                                                                                  <  1:119235/147‑1 (MQ=255)                      aTGCTGGCAACGATCTTCTCGGCAATGTGTTCGGCATCCTTGCGCGTATGCAAAGGCGTCAACAACACGGCAAACTCGTCGCCCCCCAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCaa                                                                                                                               >  3:187887/1‑149 (MQ=255)                       tGCTGGCAACGATCTTCTCGGCAATGTGTTCGGCATCCTTGCGCGTATGCAAAGGCGTCAACAACACGGCAAACTCGTCGCCCCCCAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCaa                                                                                                                               >  7:219034/1‑148 (MQ=255)                          tGGCAACGATCTTCTCGGCAATGTGTTCGGCATCCTTGCGCGTATGCAAAGGCGTCAACAACACGGCAAACTCGTCGCCCCCCAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATAcc                                                                                                                           >  1:210571/1‑149 (MQ=255)                            gCAACGATCTTCTCGGCAATGTGTTCGGCATCCTTGCGCGTATGCAAAGGCGTCAACAACACGGCAAACTCGTCGCCCCCCAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTc                                                                                                                         <  7:251406/149‑1 (MQ=255)                                 gATCTTCTCGGCAATGTGTTCGGCATCCTTGCGCGTATGCAAAGGCGTCAACAACACGGCAAACTCGTCGCCCCCCAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCAc                                                                                                                    >  4:13500/1‑149 (MQ=255)                                      tctcGGCAATGTGTTCGGCATCCTTGCGCGTATGCAAAGGCGTCAACAACACGGCAAACTCGTCGCCCCCCAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCCCCCACg                                                                                                               >  4:355304/1‑149 (MQ=255)                                      acttcaagcagatcaacgacaccctcggccacgccgtgggtgacgaggtattgatcagcgtggccgaacgtgtGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCacac                                                                                                                                                  <  8:266590‑M1/41‑1 (MQ=255)                                      acttcaagcagatcaacgacaccctcggccacgccgtgggtgacgaggtattgatcagcgtggccgaacgtgtGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCacac                                                                                                                                                  >  7:266590‑M1/74‑114 (MQ=255)                                        tcGGCAATGTGTTCGGCATCCTTGCGCGTATGCAAAGGCGTCAACAACACGGCAAACTCGTCGCCCCCCAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGc                                                                                                             >  3:264476/1‑149 (MQ=255)                                           gCAATGTGTTCGGCATCCTTGCGCCTATGCAAAGGCGTCAACAACACGGCAAACTCGTCGCCCCCCAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGtc                                                                                                          >  1:322166/1‑148 (MQ=255)                                                  gtTCGGCATCCTTGCGCGTATGCAAAGGCGTCAACAACACGGCAAACTCGTCGCCCCCCAGGCGCGCCACCAGGTCGTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAgg                                                                                                   <  8:298689/149‑1 (MQ=255)                                                   ttCGGCATCCTTGCGCGTATGCAAAGGCGTGAACAACACGGCAAACTCGTCGCCCCCCAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAggg                                                                                                  >  1:34203/1‑149 (MQ=255)                                                   ttCGGCATCCTTGCGCGTATGCAAAGGCGTCAACAACACGTCAAACTCGTCGCCCCCCAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGt                                                                                                           <  8:266464/140‑1 (MQ=255)                                                   ttCGGCATCCTTGCGCGTATGCAAAGGCGTCAACAACACGGCAAACTCGTCGCCCCCCAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTgagagcgg                                                                                                   >  7:266464/1‑141 (MQ=255)                                                    tCGGCATCCTTGCGCGTATGCAAAGGCGTCAACAACACGGCAAACTCGTCGCCCCCCAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGgt                                                                                                 >  1:275571/1‑149 (MQ=255)                                                         aTCCTTGCGCGTATGCAAAGGCGTCAACAACACGGCAAACTCGTCGCCCCCCAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGt                                                                                            >  7:18202/1‑149 (MQ=255)                                                         aTCCTTGCGCGTATGCAAAGGCGTCAACAACACGGCAAACTCGTCGCCCCCCAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGt                                                                                            <  7:317438/149‑1 (MQ=255)                                                            cTTGCGTGTATGCAAAGGCGTCAACAACACGGCAAACTCGTCGCCCCCCAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGa                                                                                         >  3:121054/1‑149 (MQ=255)                                                               gcgcGTATGCAAAGGCGTCAACAACACGGCAAACTCGTCGCCCCCCAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATc                                                                                       <  2:312555/148‑1 (MQ=255)                                                                 gcgTATGCAAAGGCGTCAACAACACGGCAAACTCGTCGCCCCCCAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATCTGc                                                                                    >  2:330522/1‑149 (MQ=255)                                                                 gcgTATGCAAAGGCGTCAACAACACGGCAAACTCGTCGCCCCCCAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATCTGc                                                                                    <  6:205692/149‑1 (MQ=255)                                                                 gcgTATGCAAAGGCGTCAACAACACGGCAAACTCGTCGCCCCCCAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATCTGc                                                                                    >  1:304587/1‑149 (MQ=255)                                                                  cgTATGCAAAGGCGGCAACAACACGGCAATCTCGTCGCCCCCCAGGCGCGCCACCAGTTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCATTACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATATGCt                                                                                   <  2:322166/149‑1 (MQ=255)                                                                   gTATGCAAAGGCGTCAACAACACGGCAAACTCGTCGCCCCCCAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATCTGCtt                                                                                  <  2:220979/149‑1 (MQ=255)                                                                   gTATGCAAAGGCGTCAACAACACGGCAAACTCGTCGCCCCCCAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATCTGCtt                                                                                  <  4:187887/149‑1 (MQ=255)                                                                   cacgccgtgggtgacgaggtattgatcagcgtggccgaacgtgtGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGcaca                                                                                                                                                   >  6:170374‑M1/45‑84 (MQ=255)                                                                   cacgccgtgggtgacgaggtattgatcagcgtggccgaacgtgtGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGcaca                                                                                                                                                   <  5:170374‑M1/40‑1 (MQ=255)                                                                      tGCAAAGGCGTCAACAACACGGCAAACTCGTCGCCCCCCAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATCTGCTTGaa                                                                               <  1:92334/149‑1 (MQ=255)                                                                       gCATAGGCGTCAACAACAAGGCAAACTGGTCGCCCCCCAGGCGCGCCACCAGGTGTTGCTCGC‑GCAGCTGGGCGCGCTCACGTTGGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATCTGCTTGaa                                                                               <  3:240292/148‑1 (MQ=255)                                                                       gCAAAGGCGTCAACAACACGGCAAACTCGTCGCCCCCCAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCCCGGCGTGGCCGAGGGTGTCGTTGATCTGCTTGAAg                                                                              >  2:122845/1‑149 (MQ=255)                                                                          aaGGCGTCAACAACACGGCAAACTCGTCGCCCCCCAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATCTGCTTGAAGTgg                                                                           <  2:210571/149‑1 (MQ=255)                                                                            ggCGTCAACAACACGGCAAACTCGTCGCCGCCCAGGCGCGCCACCAGGTCTTGCTCTG‑GCAGCTGGGCGCGCAGACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATCTGCTTGAAGTGGTc                                                                         <  3:306286/149‑1 (MQ=255)                                                                             gCGTCAACAACACGGCAAACTCGTCGCCCCCCAGGCGCGCCACCAGGTCTTGCTCTC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCg                                                                                                      <  6:283636/119‑1 (MQ=255)                                                                             gCGTCAACAACACGGCAAACTCGTCGCCCCCCAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCg                                                                                                      >  5:283636/1‑119 (MQ=255)                                                                             gCGTCAACAACACGGCAAACTCGTCGCCCCCCAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATCTGCTTGAAGTGGTCg                                                                        <  7:44186/149‑1 (MQ=255)                                                                                  aacaacACGGCAAACTCGTCGCCCCCCAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATCTGCTTGAAGTGGTCGCTGTc                                                                   >  6:157826/1‑149 (MQ=255)                                                                                   acaacaCGGCAAACTCGTCGCCCCCCAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATCTGCTTGAAGTGGTCGCTGTc                                                                   >  7:71429/1‑148 (MQ=255)                                                                                   acaacaCGGCAAACTCGTCGCCCCCCAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATCTGCTTGAAGTGGTCGCTGTc                                                                   >  3:318673/1‑148 (MQ=255)                                                                                      acacGGCAAACTCGTCGCCCCCCAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATCTGCTTGAAGTGGTCGCTGTCGAg                                                                >  3:52421/1‑148 (MQ=255)                                                                                       cacGGCAAACTCGTCGCCCCCCAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATCTGCTTGAAGTGGTCGCTGTCGAgg                                                               >  8:259931/1‑148 (MQ=255)                                                                                       cacGGCAAACTCGTCGCCCCCCAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATCTGCTTGAAGTGGTCGCTGTCGAGGa                                                              <  8:18202/149‑1 (MQ=255)                                                                                        acGGCAAACTCGTCGCCCCCCAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGGTGATCTGCTTGAAGTGGTCGCTGTCGAGGac                                                             >  3:346209/1‑148 (MQ=255)                                                                                         cGGCAAACTCGTCGCCCCCCAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATCTGCTTGAAGTGGTCGCTGTCGAg                                                                <  8:339355/145‑1 (MQ=255)                                                                                         cGGCAAACTCGTCGCCCCCCAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATCTGCTTGAAGTGGTCGCTGTCGAg                                                                >  7:339355/1‑145 (MQ=255)                                                                                          ggCAAACTCGTCGCCCCCCAGGCGCGCCACCAGGTCTTGCTCGCGGCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATCTGCTTGAAGTGGTCGCTGTCGAGGac                                                             >  1:78204/1‑147 (MQ=255)                                                                                          ggCAAACTCGTCGCCCCCCAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACTCGTTCGGCCACGCTGATCAAAACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGa                                                                                         <  8:269385/119‑1 (MQ=255)                                                                                          ggCAAACTCGTCGCCCCCCAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAAAACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGa                                                                                         >  7:269385/1‑119 (MQ=255)                                                                                            cAAACTCGTCGCCCCCCAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCCGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATCTGCTTGAAGTGGTCGCTGTCGAGGAACAg                                                          >  1:301983/1‑148 (MQ=255)                                                                                             aaaCTCGTCGCCCCCCAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATCTGCTTGAAGTGGTCGCTGTCGa                                                                 <  6:176436/140‑1 (MQ=255)                                                                                             aaaCTCGTCGCCCCCCAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATCTGCTTGAAGTGGTCGCTGTCGa                                                                 >  5:176436/1‑140 (MQ=255)                                                                                                    tcgCCCCCCAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATCTGCTTGAAGTGGTCGCTGTCGAGGAACAGCACTGCCAg                                                 >  3:231680/1‑149 (MQ=255)                                                                                                      gCCCCCCAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATCTGCTTGAAGTGGTCGCTGTCGAGGAACAGCACTGCCAgg                                                <  4:89523/148‑1 (MQ=255)                                                                                                          cccAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATCTGCTTGAAGTGGTCg                                                                        >  1:188997/1‑120 (MQ=255)                                                                                                          cccAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATCTGCTTGAAGTGGTCg                                                                        <  2:188997/120‑1 (MQ=255)                                                                                                            gtgtgcgcgcccagctgcgcgagcaagacctggtggcgcgcACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATCTGCTTGAAGt                                                                             <  8:266590‑M2/73‑1 (MQ=255)                                                                                                            gtgtgcgcgcccagctgcgcgagcaagacctggtggcgcgcACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATCTGCTTGAAGt                                                                             >  7:266590‑M2/42‑114 (MQ=255)                                                                                                             tgtgcgcgcccagctgcgcgagcaagacctggtggcgcgcACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTg                                                                                                          <  5:170374‑M2/44‑1 (MQ=255)                                                                                                             tgtgcgcgcccagctgcgcgagcaagacctggtggcgcgcACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTg                                                                                                          >  6:170374‑M2/41‑84 (MQ=255)                                                                                                              ggCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATCTGCTTGAAGTGGTCGCTGTCGAGGAACAGCACTGCCAGGTGGTCctgc                                       <  3:13500/149‑1 (MQ=255)                                                                                                               GCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAgg                                                                                                   <  5:115155‑M1/88‑1 (MQ=255)                                                                                                               GCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAgg                                                                                                   >  6:115155‑M1/1‑88 (MQ=255)                                                                                                               GCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATCTGCTTGAAGTGGTCGCTGTCGAGGAACAGCACTGCCAGGTGGTCctgct                                      >  8:182712‑M1/1‑149 (MQ=255)                                                                                                                    CCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATCTGCTTGAAGTGGTCGCTGTCGAGGAACAGCACTGCCAGGTGGTCCTGCTGgcgc                                 <  6:122729‑M1/149‑1 (MQ=255)                                                                                                                     CACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATCTGCTTGAAGTGGTCGCTGTCGAGGAACAGCACTGCCAGGTGGTCctgctg                                     <  6:309541‑M1/144‑1 (MQ=255)                                                                                                                     CACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATCTGCTTGAAGTGGTCGCTGTCGAGGAACAGCACTGCCAGGTGGTCctgctg                                     >  5:309541‑M1/1‑144 (MQ=255)                                                                                                                      accaGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATCTGCTTGAAGTGGTCGCTGTCGAGGAACAGCACTGCCAGGTGGTCCTGCTGgcgcgc                               >  4:270828/1‑149 (MQ=255)                                                                                                                       ccaGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCTCGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATCTGCTTGAAGTGGTCGCTGTCGAGGAACAGCACTGCCAGGTGGTCCTGCTGGCGcgcc                              <  3:290436/149‑1 (MQ=255)                                                                                                                       ccaGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATCTGCTTGAAGTGGTCGCTGTCGAGGAACAGCACTGCCAGGTGGTCCTGCTGGCGcgcc                              >  8:179640/1‑149 (MQ=255)                                                                                                                       ccaGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATCTGCTTGAAGTGGTCGCTGTCGAGGAACAGCACTGCCAGGTGGTCCTGCTGGCGcgcc                              <  2:275571/149‑1 (MQ=255)                                                                                                                             cTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATCTGCTTGAAGTGGTCGCTGTCGAGGAACAGCACTGCCAGGTGGTCCTGCTGGCGCGCCGCAttt                        <  5:353372/149‑1 (MQ=255)                                                                                                                              ttGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATCTGCTTGAAGTGGTCGCTGTCGAGGAACAGCACTGCCAGGTGGTCCTGCTGGCGCGCCGCATTTc                       >  7:197129/1‑149 (MQ=255)                                                                                                                                  tCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATCTGCTTGAAGTGGTCGCTGTCGAGGAACAGCACTGCCAGGTGGTCCTGCTGGCGCGCCGCATTTCGCAc                   >  3:354960/1‑149 (MQ=255)                                                                                                                                       gcAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATCTGCTTGAAGTGGTCGCTGTCGAGGAACAGCACTGCCAGGTGGTCCTGCTGGCGCGCCGCATTTCGCACGCTg               >  4:141169/1‑149 (MQ=255)                                                                                                                                         aGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATCTGCTTGAAGTGGTCGCTGTCGAGGAACAGCACTGCCAGGTGGTCCTGCTGGCGCGCCGCATTTCGCACGCTGCg             <  8:219034/149‑1 (MQ=255)                                                                                                                                              ggcgcgcACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATCTGCTTGAAGTGGTCGCTGTCGAGGAACAGCACTGCCAGGTGGTCCTGCTGGCGCGCCGCATTTCGCACGCTGCGGCTCa        <  2:34203‑M2/142‑1 (MQ=255)                                                                                                                                                   gcACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATCTGCTTGAAGTGGTCGCTGTCGAGGAACAGCACTGCCAGGTGGTCCTGCTGGCGCGCCGCATTTCGCACGCTGCGGCTCAGgcgc   >  5:199922‑M2/3‑149 (MQ=255)                                                                                                                                                    cACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATCTGCTTGAAGTGGTCGCTGTCGAGGAACAGCACTGCCAGGTGGTCCTGCTGGCGCGCCGCATTTCGCACGCTGCGGCTCAGGCGcc  <  4:231680‑M2/148‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                    TCCAGTTGCACCGGCAGCTCCATGCTGGCAACGATCTTCTCGGCAATGTGTTCGGCATCCTTGCGCGTATGCAAAGGCGTCAACAACACGGCAAACTCGTCGCCCCCCAGGCGCGCCACCAGGTCTTGCTCGC‑GCAGCTGGGCGCGCACACGTTCGGCCACGCTGATCAATACCTCGTCACCCACGGCGTGGCCGAGGGTGTCGTTGATCTGCTTGAAGTGGTCGCTGTCGAGGAACAGCACTGCCAGGTGGTCCTGCTGGCGCGCCGCATTTCGCACGCTGCGGCTCAGGCGCC  >  NC_002947/5296278‑5296572

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.