| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5481616 | 45 (0.750) | 3 (0.050) | 3/250 | NT | 5.8% | coding (1105/1356 nt) | PP_4819 | hypothetical protein |
| ? | NC_002947 | = 5481643 | 55 (0.960) | coding (1132/1356 nt) | PP_4819 | hypothetical protein | |||||
ACTTCGACGAAATGGCCCGGCAGGACCAGTATCGGCCGATTTTCCAGCAGATCTGCCCGATGGTCGGTTGCCAGGTGCCTACCCGCGTCGATATTGCACGCATCAAGAGCAGCAATCTGGTGGTACGCAGCCACCCGGACTTCAAGGGCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5481464‑5481616‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcgcGGTTGTAGATGATCGCGTCGACAATCAGCGCGCCCTTGAAGTCCGGGTGGCTGCGTACCACCAGATTGCTGCTCTTGATGCGTGCAATATCGACGCGGGTAGGCACCTGGCAACCGACCATCGGGCAGATCTGCTGGAAAATCGGCC < NC_002947/5481643‑5481497 ACTTCGACGAAATGGCCCGGCAGGACCAGTATCGGCCGATTTTCCAGCAGATCTGCCCGATGGTCGGTTGCCAGGTGCCTACCCGCGTCGATATTGCACGCATCAAGAGCAGCAATCTGGTGGTACGCAGCCACCCGGAGGTCACGGGC > 2:318837/1‑149 TTCGACGAAATGGCCCGGCAGGACCAGTATCGGCCGATTTTCCAGCAGATCTGCCCGATGGTCGGTTGCCAGGTGCCTACCCGCGTCGATATTGCACGCATCAAGAGCAGCAATCTGGTGGTACGCAGCCACCCGGACTTCAAGGGCGC > 5:331249/1‑149 GACGAACTCGCCCGGCAGGACCAGTATCGGCCGATTTTCCAGCAGATCTGCCCGATGGTCGGTTGCCAGGTGCCTACCCGCGGCGATATTGCACGCATCAAGAGCAGCAATCTGGTGGTACGCAGCCACCCGGACTTCAAGGGCGCGC < 7:343778/148‑1 GACGAAATGGCCCGGCAGGACCAGTATCGGCCGATTTTCCAGCAGATCTGCCCGATGGTCGGTTGCCAGGTGCCTACCCGCGTCGATATTGCACGCATCAAGAGCAGCAATCTGGTGGTACGCAGCCACCCGGACTTCAAGGGCGCGCG > 2:252639/1‑149 GACGAAATCGCCCGGAAGGACCAGTATCGGCCGATATTCCAGCACATCTGCCCGATGGTCGGTTGCCAGGTGACTACCCGCGTCGATATTGCACGCATCAAGAGCAGCAATCTGGTGGTACGCATCCAACCGGACTTCAAGGGCGCG > 7:4138/1‑147 TTTTCCAGCAGATCTGCCCGATGGTCGGTTGCCAGGTGCCTACCCGCGTCGATATTGCACGCATCAAGAGCAGCAATCTGGTGGTACGCAGCCACCCGGACTTCAAGGGCGCGCGGTTGTAGATGATCGCGTCGACAATCAGCGCGCCC < 7:207594/149‑1 TCCAGCAGATCTGCCCGATGGTCGGTTGCCAGGTGCCTACCCGCGTCGATATTGCACGCATCAAGAGCAGCAATCTGGTGGTACGCAGCCACCCGGACTTCAAGGGCGCGCGGTTGTAGATGATCGCGTCGACAATCAGCGCGCCCTT < 1:252639/148‑1 CAGCAGATCTGCCCGATGGTCGGTTGCCAGGTGCCTACCCGCGTCGATATTGCACGCATCAAGAGCAGCAATCTGGTGGTACGCAGCCACCCGGACTTCAAGGGCGCGCGGTTGTAGATGATCGCGTCGACAATCAGCGCGCCCTTGAA < 7:35623/149‑1 GGCGCGCGGTTGTAGATGATCGCGTCGACAATCAGCGCGCCCTTGAAGTCCGGGTGGCTGCGTACCACCAGATTGCTGCTCTTGATGCGTGCAATATCGACGCGGGTAGGCACCTGGCAACCGACCATCGGGCAGATCTGCTGGAAAAT < 3:314655/149‑1 CGCGGTTGTAGATGATCGCGTCGACAATCAGCGCGCCCTTGAAGTCCGGGTGGCTGCGTACCACCAGATTGCTGCTCTTGATGCGTGCAATATCGACGCGGGTAGGCACCTGGCAACCGACCATCGGGCAGATCTGCTGGAAAATCGGC < 8:331099/149‑1 GCGGTTGTAGATGATCGCGTCGACAATCAGCGCGCCCTTGAAGTCCGGGTGGCTGCGTACCACCAGATTGCTGCTCTTGATGCGTGCAATATCGACGCGGGTAGGCACCTGGCAACCGACCATCGGGCAGATCTGCTGGAAAATCGGCC > 1:184336/1‑149 ACTTCGACGAAATGGCCCGGCAGGACCAGTATCGGCCGATTTTCCAGCAGATCTGCCCGATGGTCGGTTGCCAGGTGCCTACCCGCGTCGATATTGCACGCATCAAGAGCAGCAATCTGGTGGTACGCAGCCACCCGGACTTCAAGGGCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5481464‑5481616‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcgcGGTTGTAGATGATCGCGTCGACAATCAGCGCGCCCTTGAAGTCCGGGTGGCTGCGTACCACCAGATTGCTGCTCTTGATGCGTGCAATATCGACGCGGGTAGGCACCTGGCAACCGACCATCGGGCAGATCTGCTGGAAAATCGGCC < NC_002947/5481643‑5481497 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |