New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5481616	45 (0.750)	3 (0.050)	3/250	NT	5.8%	coding (1105/1356 nt)	PP_4819	hypothetical protein
	?	NC_002947	= 5481643	55 (0.960)					coding (1132/1356 nt)	PP_4819	hypothetical protein

GGCCGATTTTCCAGCAGATCTGCCCGATGGTCGGTTGCCAGGTGCCTACCCGCGTCGATATTGCACGCATC‑AAGAGCAGCAATCTGGTGGTACGCAGCCACCCGGA‑CTTCAAGGGCGCGCTGATTGTCGACGCGATCATCTACAACCGCGCGCCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAAT  >  NC_002947/5481497‑5481791                                                                                                                                                     |                                                                                                                                                     ggCCGATTTTCCAGCAGATCTGCCCGATGGTCGGTTGCCAGGTGCCTACCCGCGTCGATATTGCACGCATC‑AAGAGCAGCAATCTGGTGGTACGCAGCCACCCGGA‑CTTCAAGGGCGCGCTGATTGTCGACGCGATCATCTACAACCgc                                                                                                                                                    >  1:184336‑M2/1‑147 (MQ=255)  gCCGATTTTCCAGCAGATCTGCCCGATGGTCGGTTGCCAGGTGCCTACCCGCGTCGATATTGCACGCATC‑AAGAGCAGCAATCTGGTGGTACGCAGCCACCCGGA‑CTTCAAGGGCGCGCTGATTGTCGACGCGATCATCTACAACCgcg                                                                                                                                                   <  8:331099‑M2/149‑4 (MQ=255)      aTTTTCCAGCAGATCTGCCCGATGGTCGGTTGCCAGGTGCCTACCCGCGTCGATATTGCACGCATC‑AAGAGCAGCAATCTGGTGGTACGCAGCCACCCGGA‑CTTCAAGGGCGCGCTGATTGTCGACGCGATCATCTACAACCgcgcgcc                                                                                                                                               <  3:314655‑M2/149‑8 (MQ=255)              gcagATCTGCCCGATGGTCGGTTGCCAGGTGCCTACCCGCGTCGATATTGCACGCATC‑AAGAGCAGCAATCTGGTGGTACGCAGCCACACGGA‑CTTCAAGGGCGCGCTGATTGTCGACGCGATCATCTACAACCGCGCGCCGTTCGcc                                                                                                                                        >  2:239597/1‑148 (MQ=255)                  aTCTGCCCGATGGTCGGTTGCCAGGTGCCTACCCGCGTCGATATTGCACGCATC‑AAGAGCAGCAATCTGGTGGTACGCAGCCACCCGGA‑CTTCAAGGGCGCGCTGATTGTCGACGCGATCATCTACAACCGCGCGCCGTTCGCCCAGc                                                                                                                                    >  4:232117/1‑148 (MQ=255)                  aTCTGCCCGATGGTCGGTTGCCAGGTGCCTACCCGCGTCGATATTGCACGCATC‑AAGAGCAGCAATCTGGTGGTACGCAGCCACCCGGA‑CTTCAAGGGCGCGCTGATTGTCGACGCGATCATCTACAACCGCGCGCCGTTCGCCCAGc                                                                                                                                    >  5:66741/1‑148 (MQ=255)                     tGCCCGATGGTCGGTTGCCAGGTGCCTACCCGCGTCGATATTGCACGCATC‑AAGAGCAGCAATCTGGTGGTACGCAGCCACCCGGA‑CTTCAAGGGCGCGCTGATTGTCGACGCGATCATCTACAACCGCGCGCCGTTCGCCCAGCCAtt                                                                                                                                >  8:319778/1‑149 (MQ=255)                       cccGATGGTCGGTTGCCAGGTGCCTACCCGCGTCGATATTGCACGCATC‑AAGAGCAGCAATCTGGTGGTACGCAGCCACCCGGA‑CTTCAAGGGCGCGCTGATTGTCGACGCGATCATCTACAACCGCGCGCCGTTCGCCCAGCCATTc                                                                                                                               <  4:314655/148‑1 (MQ=255)                       cccGATGGTCGGTTGCCAGGTGCCTACCCGCGTCGATATTGCACGCATC‑AAGAGCAGCAATCTGGTGGTACGCAGCCACCCGGA‑CTTCAAGGGCGCGCTGATTGTCGACGCGATCATCTACAACCGCGCGCCGTTCGCCCAGCCATTc                                                                                                                               <  7:331099/148‑1 (MQ=255)                        ccGATGGTCGGTTGCCGGGTGCCTACCCGCGTCGATATTGCACGCATCGAAGAGCAGCAATCTGGTGGTACGCAGCCACCCGGA‑CTTCAAGGGCGCGCTGATTGTCGACGCGATCATCTACAACCGCGCGCCGTTCGCCCAGCCATTcc                                                                                                                              >  1:89273/1‑149 (MQ=255)                         cGATGGTCGGTTGCCAGGTGCCTACCCGCGTCGATATTGCACGCATC‑AAGAGCAGCAATCTGGTGGTACGCAGCCACCCGGA‑CTTCAAGGGCGCGCTGATTGTCGACGCGATCATCTACAACCGCGCGCCGTTCGCCCAGCCATTCCCg                                                                                                                            <  5:139609/149‑1 (MQ=255)                         cGATGGTCGGTTGCCAGGTGCCTACCCGCGTCGATATTGCACGCATC‑AAGAGCAGCAATCTGGTGGTACGCAGCCACCCGGA‑CTTCAAGGGCGCGCTGATTGTCGACGCGATCATCTACAACCGCGCGCCGTTCGCCCAGCCATTCCCg                                                                                                                            >  8:213771/1‑149 (MQ=255)                                 ggTTGCCGGGTGCCTACCCGCGTCGATATTGCACGCATC‑AAGAGCAGCAATCTGGTGGTACGCAGCCACCCGGA‑CTTCAAGGGCGCGCTGATTGTCGACGCGATCATCTACAACCGCGCGCCGTTCGCCCAGCCATTCCCGTTGCTGGa                                                                                                                    <  2:89273/149‑1 (MQ=255)                                      cctggTGCCTACCCTCGTCGATATTGCACGCATC‑AAGAGCAGCAATCTGGTGGTACGCAGCCACCCGGA‑CTTCAAGGGCGCTCTGATTGTCGACGCGATCATCTACAACCGCGCGCCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTgc                                                                                                               <  8:4138/146‑1 (MQ=255)                                      cctggTGCCTACCCGCGTCGATATTGCACGCATC‑AAGAGCAGCAATCTGGTGGTACGCAGCCACCCGGA‑CTTCAAGGGCGCGCTGATTGTCGACGCGATCATCTACAACCGCGCGCCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTgc                                                                                                               <  1:134753/146‑1 (MQ=255)                                      ccAGGTGCCTACCCGCGTCGATATTGCACGCATC‑AAGAGCAGCAATCTGGTGGTACGCAGCCACCCGGA‑CTTCAAGGGCGCGCTGATTGTCGACGCGATCATCTACAACCGCTCGCCGTTCGCCAAGCCATTCCCGTTGCTGGAGCTgc                                                                                                               >  2:53003/1‑149 (MQ=255)                                        aGGTGCCTACCCGCGTCGATATTGCACGCATC‑AAGAGCAGCAATCTGGTGGTACGCAGCCACCCGGA‑CTTCAAGGGCGCGCTGATTGTCGACGCGATCATCTACAACCGCGCGCCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTgcgc                                                                                                             >  4:294304/1‑149 (MQ=255)                                         ggTGCCTACCCGCGTCGATATTGCACGCATC‑AAGAGCAGCAATCTGGTGGTACGCAGCCACCCGGA‑CTTCAAGGGCGCGCTGATTGTCGACGCGATCATCTACAACCGCGCGCCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCt                                                                                                            <  6:331249/149‑1 (MQ=255)                                           tGCCTACCCGCGTCGATATTGCACGCATC‑AAGAGCAGCAATCTGGTGGTACGCAGCCACCCGGA‑CTTCAAGGGCGCGCTGATTGTCGACGCGATCATCTACAACCGCGCGCCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTc                                                                                                          <  7:213771/149‑1 (MQ=255)                                            gCCTACCCGCGTCGATATTGCACGCATC‑AAGAGCAGCAATCTGGTGGTACGCAGCCACCCGGA‑CTTCAAGGGCGCGCTGATTGTCGACGCGATCATCTACAACCGCGCGCCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCg                                                                                                         >  6:45395/1‑149 (MQ=255)                                              cTACCCGCGTCGATATTGCACGCATC‑AAGAGCAGCAATCTGGTGGTACGCAGCCACCCGGA‑CTTCAAGGGCGCGCTGATTGTCGACGCGATCATCTACAACCGCGCGCCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCGcc                                                                                                       >  2:46654/1‑149 (MQ=255)                                               tACCCGCGTCGATATTGCACGCATC‑AAGAGCAGCAATCTGGTGGTACGCAGCCACCCGGA‑CTTCAAGGGCGCGCTGATTGTCGACGCGATCATCTACAACCGCGCGCCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCGCCg                                                                                                      >  8:158612/1‑149 (MQ=255)                                                         gATATTGCACTCATC‑AAGAGCATCAATCTGGTGGTACGCAGCCACCCGGA‑CTTCAAGGGCGCGCTGATTGTCGACGCGATCATCTACAACCGCGAGCAGTTCGCCCATCCATTACCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATgg                                                                                            <  2:34792/149‑1 (MQ=255)                                                         gATATTGCACGCATC‑AAGAGCAGCAATCTGGTGGTACGCAGCCACCCGGA‑CTTCAAGGGCGCGCTGATTGTCGACGCGATCATCTACAACCGCGCGCCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATgg                                                                                            <  1:150125/149‑1 (MQ=255)                                                            atTGCACGCATC‑AAGAGCAGCAATCTGGTGGTACGCAGCCACCCGGA‑CTTCAAGGGCGCGCTGATTGTCGACGCGATCATCTACAACCGCGCGCCGTTCGCCCAGCCATTCCTGTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGcc                                                                                          >  6:351855/1‑148 (MQ=255)                                                             ttGCACGCATC‑AAGAGCAGCAATCTGGTGGTACGCAGCCACCCGGA‑CTTCAAGGGCGCGCTGATTGTCGACGCGATCATCTACAACCGCGCGCCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCaa                                                                                        >  4:87172/1‑149 (MQ=255)                                                                cACGCATC‑AAGAGCAGCAATCTGGTGGTACGCAGCCACCCGGAGCTTCAAGGGCGCGCTGATTGTCGACGCGATCATCTACAACCGCGCGCCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACt                                                                                      >  1:72246/1‑149 (MQ=255)                                                                 aCGCATC‑AAGAGCAGCAATCTGGTGGTACGCAGCCACCCGGA‑CTTCAAGGGCGCGCTGATTGTCGACGCGATCATCTACAACCGCGCGCCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACTGa                                                                                    >  6:333918/1‑149 (MQ=255)                                                                  cGCATC‑AAGAGCAGCAATCTGGTGGTACGCAGCCACCCGGA‑CTTCAAGGGCGCGCTGATTGTCGACGCGATCATCTACAACCGCGCGCCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACTGAt                                                                                   <  1:26774/149‑1 (MQ=255)                                                                   gCATC‑AAGAGCAGCAATCTGGTGGTACGCAGCCACCCGGA‑CTTCAAGGGCGCGCTGATTGTCGACGCGATCATCTACAACCGCGCGCCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACTGATc                                                                                  <  1:46654/149‑1 (MQ=255)                                                                     aTC‑AAGAGCAGCAATCTGGTGGTACGCAGCCACCCGGA‑CTTCAAGGGCGCGCTGATTGTCGACGCGATCATCTACAACCGCGCGCCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCCACTGATCGc                                                                                >  3:365198/1‑149 (MQ=255)                                                                             gcagcaATCTGGTGGTACGCAGCCACCCGGA‑CTTCAAGGGCGCGCTGATTGTCGACGCGATCATCTACAACCGCGCGCCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACTGATCGCCAGCCGt                                                                         <  6:66741/149‑1 (MQ=255)                                                                              cagcaATCTGGTGGTACGCAGCCACCCGGA‑CTTCAAGGGCGCGCTGATTGTCGACGCGATCATCTACAACCGCGCGCCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACTGATCGCCAGCCGTc                                                                        >  4:40716/1‑149 (MQ=255)                                                                                gcaATCTGGTGGTACGCAGCCACCCGGA‑CTTCAAGGGCGCGCTGATTGTCGACGCGATCATCTACAACCGCGCGCCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACTGATCGCCAGCCGTCGc                                                                      >  2:72128/1‑149 (MQ=255)                                                                                  aaTCTGGTGGTACGCGGCCACCCGGA‑CTTCAAGGGCGCGCTGATTGTCGACGCGATCATCTACAACCGCGCGCCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACTGATCGCCAGCCGTCGCt                                                                     >  8:179960/1‑148 (MQ=255)                                                                                      tggtggTACGCAGCCACCCGGA‑CTTCAAGGGCGCGCTGATTGTCGACGCGATCATCTACAACCGCGCGCCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACt                                                                                      >  5:186408/1‑127 (MQ=255)                                                                                      tggtggTACGCAGCCACCCGGA‑CTTCAAGGGCGCGCTGATTGTCGACGCGATCATCTACAACCGCGCGCCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACt                                                                                      <  6:186408/127‑1 (MQ=255)                                                                                           gtACGCAGCCACCCGGA‑CTTCAAGGGCGCGCTGATTGTCGACGCGATCATCTACAACCGCGCGCCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCa                                                            <  1:239597/148‑1 (MQ=255)                                                                                                  gCCACCCGGA‑CTTCAAGGGCGCGCTGATTGTCGACGCGATCATCTACAACCGCGCGCCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTAc                                                    <  7:319778/149‑1 (MQ=255)                                                                                                     aCCCGGA‑CTTCAAGGGCGCGCTGATTGTCGACGCGATCATCTACAACCGCGCGCCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTg                                                 >  8:261685/1‑149 (MQ=255)                                                                                                     aCCCGGA‑CTTCAAGGGCGCGCTGATTGTCGACGCGATCATCTACAACCGCGCGCCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTAGGGAAGCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTg                                                 >  1:127168/1‑149 (MQ=255)                                                                                                         ggA‑CTTCAAGGGCGCGCTGATTGTCGACGCGATCATCTACAACCGCGCGCCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCgg                                             <  3:40716/149‑1 (MQ=255)                                                                                                              ttCAAGGGCGCGCTGATTGTCGACGCGATCATCTACAACCgcgcgcccttgaagtccgggtggctgcgtaccaccagattgctgctcttgatgcgtgcaatatcgacgcgggtaggcacctggcaaccgaccatcgggcagatctgctg                                         <  7:35623‑M2/149‑110 (MQ=255)                                                                                                              ttCAAGGGCGCGCTGATTGTCGACGCGATCATCTACAACCGCGCGCCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACTGATCGCCa                                                                              <  6:136178/112‑1 (MQ=255)                                                                                                                 aaGGGCGCGCTGATTGTCGACGCGATCATCTACAACCgcgcgcccttgaagtccgggtggctgcgtaccaccagattgctgctcttgatgcgtgcaatatcgacgcgggtaggcacctggcaaccgaccatcgggcagatctgctgga                                       <  1:252639‑M2/148‑112 (MQ=255)                                                                                                                   gggCGCGCTGATTGTCGACGCGATCATCTACAACCgcgcgcccttgaagtccgggtggctgcgtaccaccagattgctgctcttgatgcgtgcaatatcgacgcgggtaggcacctggcaaccgaccatcgggcagatctgctggaaaa                                    <  7:207594‑M2/149‑115 (MQ=255)                                                                                                                     gcgcgcTGATTGTCGACGCGATCATCTACAACGGCGCGCCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGGCGGGCGAACTGGCa                                  <  3:225395/149‑1 (MQ=255)                                                                                                                     gcgcgcTGATTGTCGACGCGATCATCTACAACCGCGCGCCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCa                                  <  5:333918/149‑1 (MQ=255)                                                                                                                      cgcgcTGATTGTCGACGCGATCATCTACAACCGCGCGCCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAAGTGGCAg                                 <  1:72128/149‑1 (MQ=255)                                                                                                                      cgcgcTGATTGTCGACGCGATCATCTACAACCGCGCGCCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAg                                 <  3:294304/149‑1 (MQ=255)                                                                                                                       gcgcTGATTGTCGACGCGATCATCTACAACCGCGCGCCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAgg                                >  2:125069/1‑149 (MQ=255)                                                                                                                         gcTGATTGTCGACGCGATCATCTACAACCGCGCGCCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGgc                              >  7:276048/1‑149 (MQ=255)                                                                                                                         gcTGATTGTCGACGCGATCATCTACAACCGCGCGCCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGgc                              >  4:232218/1‑149 (MQ=255)                                                                                                                         gcTGATTGTCGACGCGATCATCTACAACCGCGCGCCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGgc                              >  2:203783/1‑149 (MQ=255)                                                                                                                           tGATTGTCGACGCGATCATCTACAACCGCGCGCCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGgcgc                            >  1:210478/1‑149 (MQ=255)                                                                                                                                   gACGCGATCATCTACAACCGCGCGCCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAAt                    >  7:149460/1‑149 (MQ=255)                                                                                                                                    aCGCGATCATCTACAACCGCGCGCCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATg                   <  1:125069/149‑1 (MQ=255)                                                                                                                                       cgATCATCTACAACCGCGCGCCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATCGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGccc                <  1:119927/149‑1 (MQ=255)                                                                                                                                        gATCATCTACAACCGCGCGCCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGcc                 >  8:59177/1‑147 (MQ=255)                                                                                                                                             tcTACAACCGCGCGCCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCccagc             >  1:334648/1‑146 (MQ=255)                                                                                                                                              cTACAACCGCGCGCCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGa         >  3:2241/1‑149 (MQ=255)                                                                                                                                                 cAACCGCGCGCCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGa         <  3:87172/146‑1 (MQ=255)                                                                                                                                                 cAACCGCGCGCCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGc      <  5:45395/149‑1 (MQ=255)                                                                                                                                                  aaCCGCGCGCCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCcca               <  2:71397/139‑1 (MQ=255)                                                                                                                                                  aaCCGCGCGCCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCcca               >  1:71397/1‑139 (MQ=255)                                                                                                                                                    ccGCGCGCCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACAGGCAGGGCGCGGTGCAATGCCCCGCCAGACGCCa    >  2:297590/1‑148 (MQ=255)                                                                                                                                                    ccGCGCGCCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGACTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGcaa    >  4:25120/1‑146 (MQ=255)                                                                                                                                                     cgcgcgcccttgaagtccgggtggctgcgtaccaccagattgctgctcttgatgcgtgcaatatcgacgcgggtaggcacctggcaaccgaccatcgggcagatctgctggaaaatcggccgatactggtcctgccgggccatttcgtc  >  2:252639‑M2/1‑1 (MQ=255)                                                                                                                                                     cgcgcgCCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAAt  >  3:240075/1‑149 (MQ=255)                                                                                                                                                     cgcgcgCCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAAt  <  2:334648/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                     GGCCGATTTTCCAGCAGATCTGCCCGATGGTCGGTTGCCAGGTGCCTACCCGCGTCGATATTGCACGCATC‑AAGAGCAGCAATCTGGTGGTACGCAGCCACCCGGA‑CTTCAAGGGCGCGCTGATTGTCGACGCGATCATCTACAACCGCGCGCCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAAT  >  NC_002947/5481497‑5481791

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.