New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5658546	75 (1.250)	5 (0.090)	5/252	NT	6.2%	coding (601/993 nt)	sahR	methionine metabolism transcriptional regulator
	?	NC_002947	= 5658574	79 (1.370)					coding (629/993 nt)	sahR	methionine metabolism transcriptional regulator

CGCGACAGCCTGCTGGCGCTGCTCGACAAACTGCATTTCGACCCGGCCGCCAGCGCGCTGGAAGTCGGCCCCGGCGACGGTGGCTTCCTGCCCGACCTGGCCCGGCGCTTCGCCCAGGTCACCGCCCTGGACAACAGCCCTACCATGCTCGAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5658393‑5658546 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgagcCCTTCGCGCTGGCACACCTGGCGCGCAAGCTCGAGCATGGTAGGGCTGTTGTCCAGGGCGGTGACCTGGGCGAAGCGCCGGGCCAGGTCGGGCAGGAAGCCACCGTCGCCGGGGCCGACTTCCAGCGCGCTGGCGGCCGGGTCG  <  NC_002947/5658574‑5658431                                                                                                                                                                                                                                                                                                            CGCGACAGCCTGCTGGCGCTGCTCGACAAACTGCATTTCGACCCGGCCGCCAGCGCGCTGGAAGTCGGCCCCGGCGACGGTGGCTTCCTGCCCGACCTGGCCCGGCGCTTCGCCCAGGTCACCGCCCTGGACAACAGCCCTACCATGCT                                                                                                                                                       >  3:72416/1‑149  GCGACAGCCTGCTGGCGCTGCTCGACAAACTGCATTTCGACCCGGCCGCCAGCGCGCTGGAAGTCGGCCCCGGCGACGGTGGCTTCCTGCCCGACCTGGCCCGGCGCTTCGCCCAGGTCACCGCCCTGGACAACAGCCCTACCATGCTC                                                                                                                                                      <  6:85478/149‑1    GACTGCCGGCTGGCGCTGCTCGTCAATCTGCATTTCGACGCGTCCGCCCGCGCGCTGGAAGTCGGCCCCGGCGACGGTGGCTTCCTGCCCGACCTGGCCCGGCGCTTCGCCCAGGTCACCGCCCTGGACAACAGCCCTACCATGCTCGA                                                                                                                                                    <  4:284118/149‑1    GACAGCCTGCTGGCGCTGCTCGACAAACTGCATTTCGACCCGGCCGCCAGCGCGCTGGAAGTCGGCCCCGGCGACGGTGGCTTCCTGCCCGACCTGGCCCGGCGCTTCGCCCAGGTCACCGCCCTGGACAACAGCCCTACCATGCTCGA                                                                                                                                                    <  6:84564/149‑1          CTGCTGGCGCTGCTCGACAAACTGCATTTCGACCCGGCCGCCAGCGCGCTGGAAGTCGGCCCCGGCGACGGTGGCTTCCTGCCCGACCTGGCCCGGCGCTTCGCCCAGGTCACCGCCCTGGACAACAGCCCTACCATGCTCGAGCCCTT                                                                                                                                              >  1:230080/1‑149                                       CGACCCGGCCGCCAGCGCGCTGGAAGTCGGCCCCGGCGACGGTGGCTTCCTGCCCGACCTGGCCCGGCGCTTCGCCCAGGTCACCGCCCTGGACAACAGCCCTACCATGCTCGAGCCCTTCGCGCTGGCACACCTGGCGCGCAAGCTC                                                                                                                  <  6:350659/148‑1                                        GACCCGGCCGCCAGCGCGCTGGAAGTCGGCCCCGGCGACGGTGGCTTCCTGCCCGACCTGGCCCGGCGCTTCGCCCAGGTCACCGCCCTGGACAACAGCCCTACCATGCTCGAGCCCTTCGCGCTGGCACACCTGGCGCGCAAGCTCGA                                                                                                                <  3:319237/149‑1                                         ACCCGGCCGCCAGCGCGCTGGAAGTCGGCCCCGGCGACGGTGGCTTCCTGCCCGACCTGGCCCGGCGCTTCGCCCAGGTCACCGCCCTGGACAACAGCCCTACCATGCTCGAGCCCTTCGCGCTGGCACACCTGGCGCGCAAGCTCGAG                                                                                                               >  1:275850/1‑149                                         ACCCGGCCGCCAGCGCGCTGGAAGTCGGCCCCGGCGACGGTGGCTTCCTGCCCGACCTGGCCCGGCGCTTCGCCCAGGTCACCGCCCTGGACAACAGCCCTACCATGCTCGAGCCCTTCGCGCTGGCACACCTGGCGCGCAAGCTCGAG                                                                                                               <  2:230080/149‑1                                            CGGCCGCCAGCGCGCTGGAAGTCGGCCCCGGCGACGGTGGCTTCCTGCCCGACCTGGCCCGGCGCTTCGCCCAGGTCACCGCCCTGGACAACAGCCCTACCATGCTCGAGCCCTTCGCGCTGGCACACCTGGCGCGCAAGCTCGAGCAT                                                                                                            <  2:275850/149‑1                                                                                                                                                     TCGAGCCCTTCGCGCTGGCACACCTGGCGCGCAAGCTCGAGCATGGTAGGGCTGTTGTCCAGGGCGGTGACCTGGGCGAAGCGCCGGGCCAGGTCGGGCAGGAAGCCACCGTCGCCGGGGCCGACTTCCAGCGCGCTGGCGGCCGGGT    <  3:144163/148‑1                                                                                                                                                       GAGCCCTTCGCGCTGGCACACCTGGCGCGCAAGCTCGAGCATGGTAGGGCTGTTGTCCAGGGCGGTGACCTGGGCGAAGCGCCGGGCCAGGTCGGGCAGGAAGCCACCGTCGCCGGGGCCGACTTCCAGCGCGCTGGCGGCCGGGTCG  >  4:337175/1‑148                                                                                                                                                       GAGCCCTTCGCGCTGGCACACCTGGCGCGCAAGCTCGAGCATGGTAGGGCTGTTGTCCAGGGCGGTGACCTGGGCGAAGCGCCGGGCCAGGTCGGGCAGGAAGCCACCGTCGCCGGGGCCGACTTCCAGCGCGCTGGCGGCCGGGTCG  >  8:124204/1‑148                                                                                                                                                       GAGCCCTTCGCGCTGGCACACCTGGCGCGCAAGCTCGAGCATGGTAGGGCTGTT                                                                                                >  7:184652/1‑54                                                                                                                                                       GAGCCCTTCGCGCTGGCACACCTGGCGCGCAAGCTCGAGCATGGTAGGGCTGTT                                                                                                <  8:184652/54‑1                                                                                                                                                                                                                                                                                                            CGCGACAGCCTGCTGGCGCTGCTCGACAAACTGCATTTCGACCCGGCCGCCAGCGCGCTGGAAGTCGGCCCCGGCGACGGTGGCTTCCTGCCCGACCTGGCCCGGCGCTTCGCCCAGGTCACCGCCCTGGACAACAGCCCTACCATGCTCGAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5658393‑5658546 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgagcCCTTCGCGCTGGCACACCTGGCGCGCAAGCTCGAGCATGGTAGGGCTGTTGTCCAGGGCGGTGACCTGGGCGAAGCGCCGGGCCAGGTCGGGCAGGAAGCCACCGTCGCCGGGGCCGACTTCCAGCGCGCTGGCGGCCGGGTCG  <  NC_002947/5658574‑5658431

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.