| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5914157 = | 29 (0.480) | 4 (0.080) | 4/208 | NT | 18.7% | intergenic (+49/+104) | spuI/argA | glutamylpolyamine synthetase/amino acid N‑acetyltransferase |
| ? | NC_002947 | 5914253 = | 12 (0.250) | intergenic (+145/+8) | spuI/argA | glutamylpolyamine synthetase/amino acid N‑acetyltransferase | |||||
CGGCTGCCGGCGGCGCGGGCTTCGCTGTACAACTACCAGCGCAATTCGAAGATTTTCGAGAAGCCCCTGTAAGCCTGGGCCGCCCTCTTCGCGGGCACGCCCGCTCCCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAGAGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5914332‑5914157‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggagcgggcgtgcccgcgaagagggcgGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTG‑TACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCGGAACCAGTGCGCAGTGCGCGTAGTCAGCACG > NC_002947/5914253‑5914396 CGGCTGCCGGCGGCGCGGGCTTCGCTGTACAACTACCAGCGCAATTCGAAGATTTTCGAGAAGCCCCTGTAAGCCTGGGCCGCCCTCTTCGCGGGCACGCCCGCTCCCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCG < 7:143630/149‑1CGGCTGCCGGCGGCGCGGGCTTCGCTGTACAACTACCAGCGCAATTCGAAGATTTTCGAGAAGCCCCTGTAAGCCTGGGCCGCCCTCTTCGCGGGCACGCCCGCTCCCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCG < 2:54214/149‑1 CCGGCGGCGCGGGCTTCGCTGTACAACTACCAGCGCAATTCGAAGATTTTCGAGAAGCCCCTGTAAGCCTGGGCCGCCCTCTTCGCGGGCACGCCCGCTCCCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGC < 1:251678/148‑1 CCGGCGGCGCGGGCTTCGCTGTACAACTACCAGCGCAATTCGAAGATTTTCGAGAAGCCCCTGTAAGCCTGGGCCGCCCTCTTCGCGGGCACGCCCGCTCCCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGC < 1:360241/148‑1 CGGCGGCGCGGGCTTCGCTGTACAACTACCAGCGCAATTCGAAGATTTTCGAGAAGCCCCTGTAAGCCTGGGCCGCCCTCTTCGCGGGCACGCCCGCTCCCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGG < 6:235007/149‑1 CGGCGGCGCGGGATTCGCTGTACAACTACCAGCGCAATTCGAAGATTTTCGAGAAGCCCCTGTAAGCCTGGGCCGCCCTCTTCGCGGGCACGCCCGCTCCCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGG < 8:271397/149‑1 GCGGCGCGGGCTTCGCTGTACAACTACCAGCGCAATTCGAAGATTTTCGAGAAGCCCCTGTAAGCCTGGGCCGCCCTCTTCGCGGGCACGCCCGCTCCCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGC < 7:149686/149‑1 GCGGCGCGGGCTTCGCTGTACAACTACCAGCGCAATTCGAAGATTTTCGAGAAGCCCCTGTAAGCCTGGGCCGCCCTCTTCGCGGGCACGCCCGCTCCCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGC < 7:335447/149‑1 TGTACAACTACCAGCGCAATTCGAAGATTTTCGAGAAGCCCCTGTAAGCCTGGGCCGCCCTCTTCGCGGGCACGCCCGCTCCCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTAACCTGCG < 1:129125/124‑1 TGTACAACTACCAGCGCAATTCGAAGATTTTCGAGAAGCCACTGTAAGCCTGGGCCGCCCTCTTCGCGGGCACGCCCGCTCCCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTAACCTGCG > 2:129125/1‑124 GAAGATTTTCGAGAAGCCCCTGTAAGCCTGGGCCGCCCTCTTCGCGGGCACGCCCGCTCCCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAGA < 5:287155/124‑1 GAAGATTTTCGAGAAGCCCCTGTAAGCCTGGGCCGCCCTCTTCGCGGGCACCCCCGCAACCACAGGTAAGTCACAGGCGTCAGACTTCGAAATTTACCTGGGGGAGCGGGCGTGACCGCGAAGA > 6:287155/1‑124 CCCCTGTAAGCCTGGGCCGCCCTCTTCGCGGGCACGCCCGCTCCCACAGGTAAGTCCCAGGCTTCAGCCTTCGAAATACCCCTGCGGGAGCGGGCGTGCCCGCGAAGAGG < 1:96103/110‑1 GCCCGCTCCCATAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGAGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTG‑TACAGCGAAGCCCGCGCCGC > 2:302890/1‑149 TCCCACAGGTAAGTAACAGGCTTCAGCATTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTG‑TACAGCGAAGCCCGCGCCGCCGGCAG > 1:310029/1‑149 CCCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTG‑TACAGCGAAGCCCGCGCCGCCGGCAGC > 1:36789/1‑149 CCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTG‑TACAGCGAAGCCCGCGCCGCCGGCAGCC > 8:328926/1‑149 CAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAGAGG > 2:294248/1‑53 CAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAGAGG < 1:294248/53‑1 CGGGAGCGAGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTTCCAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCGGAAC < 1:302890/147‑1 GGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTG‑TACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCGGAACCAGT < 2:36789/149‑1 GGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTG‑TACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCGGAACCAGT > 2:75749/1‑148 GGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTG‑TACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCGGAACCAGT < 1:75749/148‑1 AGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTG‑TACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCGGAACCAGTGCG > 8:62206/1‑149 GCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTG‑TACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCGGAACCAGTGCGCAGTG > 5:324646/1‑149 GCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTG‑TACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCGGAACCAGTGCGCAGTG > 2:222115/1‑149 CGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTG‑TACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCGGAACCAGTGCGCAGTGC > 8:112054/1‑149 TGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTG‑TACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCGGAACCAGTGCGCAGTGCGC < 2:310029/149‑1 CCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTG‑TACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCGGAACCAGTGCGCAGTGCGCG > 8:346764/1‑148 CCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTG‑TACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCGGAACCAGTGCGCAGTGCGCGTA < 2:20869/149‑1 GCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTG‑TACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCGGAACCAGTGCGCAGTGCGCGTAGT > 7:172337/1‑149 GGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTG‑TACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCGGAACCAGTGCGCAGTGCGCGTAGTCAGCACG < 2:71629/149‑1 GGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTG‑TACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCGGAACCAGTGCGCAGTGCGCGTAGTCAGCACG > 5:352608/1‑148 GCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTG‑TACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCGGAA > 5:52549/1‑119 GCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTG‑TACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCGGAA < 6:52549/119‑1 CGGCTGCCGGCGGCGCGGGCTTCGCTGTACAACTACCAGCGCAATTCGAAGATTTTCGAGAAGCCCCTGTAAGCCTGGGCCGCCCTCTTCGCGGGCACGCCCGCTCCCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAGAGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5914332‑5914157‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggagcgggcgtgcccgcgaagagggcgGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTG‑TACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCGGAACCAGTGCGCAGTGCGCGTAGTCAGCACG > NC_002947/5914253‑5914396 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |