| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5964575 | 46 (0.760) | 3 (0.050) | 3/250 | NT | 6.4% | coding (665/900 nt) | xerC | tyrosine recombinase XerC |
| ? | NC_002947 | = 5964613 | 44 (0.770) | coding (703/900 nt) | xerC | tyrosine recombinase XerC | |||||
GAAAAGCCCGCGTACTGCCGGTGGGTCGCAAGGCTCGCGAGGCGTTGCAGGCCTGGTACCGTTTGCGCGGCATCGGCAACCCACGCGACCGTGCAGTGTTCATTACCCGCCAGGGCAATCGCATCAGCCCCCGGGCAGTGAGGCTGCGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5964425‑5964575‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcgggtGCAGGTGTTGGCCCAGCTCACGCTCACCGGCAACCTTTACCCGCAGCCTCACTGCCCGGGGGCTGATGCGATTGCCCTGGCGGGTAATGAACACTGCACGGTCGCGTGGGTTGCCGATGCCGCGCAAACGGTACCAGGCCTGCAACG < NC_002947/5964613‑5964467 GAAAAGCCCGCGTACTGCCGGTGGGTCGCAAGGCTCGCGAGGCGTTGCAGGCCTGGTACCGTTTGCGCGGCATCGGCAACCCACGCGACCGTGCAGTGTTCATTACCCGCCAGGGCAATCGCATCAGCCCCCGGGCAGTGAGGCTGCGG < 6:276588/149‑1GAAAAGCCCGCGTACTGCCGGTGGGTCGCAAGGCTCGCGAGGCGTTGCAGGCCTGGTACCGTTTGCGCGGCATCGGCAACCCACGCGACCGTGCAGTGTTCATTACCCGCCAGGGCAATCGCATCAGCCCCCGGGCAGTGAGGCTGCGG < 8:331038/149‑1 AAAGCCCGCGTACTGCCGGTGGGTCGCAAGGCTCGCGAGGCGTTGCAGGCCTGGTACCGTTTGCGCGGCATCGGCAACCCACGCGACCGTGCAGTGTTCATTACCCGCCAGGGCAATCGCATCAGCCCCCGGGCAGTGAGGCTGCGGG > 1:179383/1‑148 GGCCTGGTACCGTTTGCGCGGCATCGGCAACCCACGCGACCGTGCAGTGTTCATTACCCGCCAGGGCAATCGCATCAGCCCCCGGGCAGTGAGGCTGCGGGTGCAGGTGTTGGCCCAGCTCACGCTCACCGGCAACCTTTACCCGCAGC < 2:329733/149‑1 TCGGCAACCCACGCGACCGTGCAGTGTTCATTACCCGCCAGGGCAATCGCATCAGCCCCCGGGCAGTGAGGCTGCGGGTGCAGGTGTTGGCCCAGCTCACGCTCACCGGCAACCTTTACCCGCAG > 5:299555/1‑125 TCGGCAACCCACGCGACCGTGCAGTGTTCATTACCCGCCAGGGCAATCGCATCAGCCCCCGGGCAGTGAGGCTGCGGGTGCAGGTGTTGGCCCAGCTCACGCTCACCGGCAACCTTTACCCGCAG < 6:299555/125‑1 GGTGCAGGTGTTGGCCCAGCTCACGCTCACCGGCAACCTTTACCCGCAGCCTCACTGCCCGGGGGCTGATGCGATTGCCCTGGCGGGTAATGAACACTGCACGGTCGCGTGGGTTGCCGATG < 3:68695/122‑1 GGTGCAGGTGTTGGCCCAGCTCACGCTCACCGGCAACCTTTACCCGCAGCCTCACTGCCCGGGGGCTGATGCGATTGCCCTGGCGGGTAATGAACACTGCACGGTCGCGTGGGTTGCCGATG > 4:68695/1‑122 GTGCAGGTGTTGGCCCAGCTCACGCTCACCGGCAACCTTTACCCGCAGCCTCACTGCCCGGGGGCTGATGCGATTGCCCTGGCGGGTAATGAACACTGCACGGTCGCGTGGGTTGCCGATGCCGCGCAAACGGTACCAGGCCTGCAACG > 4:136660/1‑149 GTGCAGGTGTTGGCCCAGCTCACGCTCACCGGCAACCTTTACCCGCAGCCTCACTGCCCGGGGGCTGATGCGATTGCCCTGGCGGGTAATGAACACTGCACGGTCGCGTGGGTTGCCGATGCCGCGCAAACGGTACCAGGCCTGCAACG > 8:249039/1‑149 GAAAAGCCCGCGTACTGCCGGTGGGTCGCAAGGCTCGCGAGGCGTTGCAGGCCTGGTACCGTTTGCGCGGCATCGGCAACCCACGCGACCGTGCAGTGTTCATTACCCGCCAGGGCAATCGCATCAGCCCCCGGGCAGTGAGGCTGCGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5964425‑5964575‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcgggtGCAGGTGTTGGCCCAGCTCACGCTCACCGGCAACCTTTACCCGCAGCCTCACTGCCCGGGGGCTGATGCGATTGCCCTGGCGGGTAATGAACACTGCACGGTCGCGTGGGTTGCCGATGCCGCGCAAACGGTACCAGGCCTGCAACG < NC_002947/5964613‑5964467 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |