New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5964575	46 (0.760)	3 (0.050)	3/250	NT	6.4%	coding (665/900 nt)	xerC	tyrosine recombinase XerC
	?	NC_002947	= 5964613	44 (0.770)					coding (703/900 nt)	xerC	tyrosine recombinase XerC

GCCCGCGTACTGCCGGTGGGTCGCAAGGCTCGCGAGGCGTTGCAGGCCTGGTACCGTTTGCGCGGCATCGGCAACCCACGCGACCGTGCAGTGTTC‑ATTACCCGCCAGGGCAATCGCATCAGCCCCCGGGCAGTGAGGCTGCGGGTAAAGGTTGCCGGTGAGCGTGAGCTGGGCCAACACCTGCACCCGCACATGCTTCGCCAT‑‑TCCTTCGCCAGCCATGTGCTGGAATCATCCCAGGACCTGCGCGCGGTGCAGGAGATGCTCGGCCACGCCGACATCAGCACGACGCAA  >  NC_002947/5964430‑5964720                                                                                                                                                   |                                                                                                                                                    gCCCGCGTACTGCCGGTGGGTCGCAAGGCTCGCGAGGCGTTGCAGGCCTGGTACCGTTTGCGCGGCATCGGCAACCCACGCGACCGTGCAGTGTTC‑ATTACCCACCAGGGCAATCGCATGAGCCCCCGGGCAGTGAGGCTGCGGGTaaa                                                                                                                                                  <  1:205170/149‑1 (MQ=255)  cccGCGTACTGCCGGTGGGTCGCAAGGCTCGCGAGGCGTTGCAGGCCTGGTACCGTTTGCGCGGCATCGGCAACCCACGCGACCGTGCAGTGTTC‑ATTACCCGCCAGGGCAATCGCATGAGCCCCCGGGCAGTGAGGCTGCGGGTAAAg                                                                                                                                                 <  1:32845/149‑1 (MQ=255)  cccGCGTACTGCCGGTGGGTCGCAAGGCTCGCGAGGCGTTGCAGGCCTGGTACCGTTTGCGCGGCATCGGCAACCCACGCGACCGTGCAGTGTTC‑ATTACCCGCCAGGGCAATCGCATCAGCCCCCGGGCAGTGAGGCTGCGGGTAAAg                                                                                                                                                 >  6:318208/1‑149 (MQ=255)    cgcgTACTGCCGGTGGGTCGCAAGGCTCGCGAGGCGTTGCAGGCCTGGTACCGTTTGCGCGGCATCGGCAACCCACGCGACCGTGCAGTGTTCAACTACCCGCCAGGGCAATCGCATCAGCCCCCGGGCAGTGAGGCTGCGGGTAAAgg                                                                                                                                                <  1:288336/149‑1 (MQ=255)       gTACTGCCGGTGGGTCGCAAGGCTCGCGAGGCGTTGCAGGCCTGGTACCGTTTGCGCGGCATCGGCAACCCACGCGACCGTGCAGTGTTC‑ATTACCCGCCAGGGCAATCGCATCAGCCCCCGGGCAGTGAGGCTGCGGGTAAAGGTTGc                                                                                                                                            >  6:40927/1‑149 (MQ=255)             ccGGTGGGTCGCAAGGCTCGCGAGGCGTTGCAGGCCTGGTACCGTTTGCGCGGCATCGGCAACCCACGCGACCGTGCAGTGTTC‑ATTACCCGCCAGGGCAATCGCATCAGCCCCCGGGCAGTGAGGCTGCGGGTaaa                                                                                                                                                  <  4:40329/137‑1 (MQ=255)             ccGGTGGGTCGCAAGGCTCGCGAGGCGTTGCAGGCCTGGTACCGTTTGCGCGGCATCGGCAACCCACGCGACCGTGCAGTGTTC‑ATTACCCGCCAGGGCAATCGCATCAGCCCCCGGGCAGTGAGGCTGCGGGTaaa                                                                                                                                                  >  3:40329/1‑137 (MQ=255)              cGGTGGGTCGCAAGGCTCGCGAGGCGTTGCAGGCCTGGTACCGTTTGCGCGGCATCGGCAACCCACGCGACCGTGCAGTGTTC‑ATTACCCGCCAGGGCAATCGCATCAGCCCCCGGGCAGTGAGGCTGCGGGTAAAGGTTGCCGgtgag                                                                                                                                     >  3:84784/1‑149 (MQ=255)                     tCGCAAGGCTCGCGAGGCGTTGCAGGCCTGGTACCGTTTGCGCGGCATCGGCAACCCACGCGACCGTGCAGTGTTC‑ATTACCCGCCAGGGCAATCGCATCAGCCCCCGGGCAGTGAGGCTGCGGGTAAAGGTTGCCGgtgcgcgtgagc                                                                                                                              >  7:347330/1‑149 (MQ=255)                     tCGCAAGGCTCGCGAGGCGTTGCAGGCCTGGTACCGTTTGCGCGGCATCGGCAACCCACGCGACCGTGCAGTGTTC‑ATTACCCGCCAGGGCAATCGCATCAGCCCCCGGGCAGTGAGGCTGCGGGTAAAGGTTGCCGgtgagcgtgagc                                                                                                                              <  5:248252/149‑1 (MQ=255)                         aaGGCTCGCGAGGCGTTGCAGGCCTGGTACCGTTTGCGCGGCATCGGCAACCCACGCGACCGTGCAGTGTTC‑ATTACCCGCCAGGGCAATCGCATCAGCCCCCGGGCAGTGAGGCTGCGGGTAAAGGTTGCCGGTGAGCGTGAGCTggg                                                                                                                          >  6:369662/1‑149 (MQ=255)                             cTCGCGAGGCGTTGAAGGCCTGGTACCGTTTGCGCGGCATCGGCAACCCAGGGGACCGTGCTGTGTTC‑ATTACCCGCCAGGGAAATCGCATCAGTCCCCGGGCAGTGAGGCTGCGGGTAAAGGTTGCCGGTGAGCGTGAGCTGGGCCaa                                                                                                                      <  1:98591/149‑1 (MQ=255)                                  gAGGCGTTGCAGGCCTGGTACCGTTTGCGCGGCATCGGCAACCCACGCGACCGTGCAGTGTTC‑ATTACCCGCCAGGGCAATCGCATCAGCCCCCGGGCAGTGAGGCTGCGGGTAAAGGTTGCCGGTGCGCGTGAGCTGGGCCAACACCt                                                                                                                 >  5:374334/1‑149 (MQ=255)                                      cGTTGCAGGCCTGGTACCGTTTGCGCGGCATCGGCAACCCACGCGACCGTGCAGTGTTC‑ATTACCCGCCAGGGCAATCGCATCAGCCCCCGGGCAGTGAGGCTGCGGGTAAAGGTTGCCGGTGAGCGTGAGCTGGGCCAACACCTGCac                                                                                                             >  8:249039‑M2/1‑147 (MQ=255)                                      cGTTGCAGGCCTGGTACCGTTTGCGCGGCATCGGCAACCCACGCGACCGTGCAGTGTTC‑ATTACCCGCCAGGGCAATCGCATCAGCCCCCGGGCAGTGAGGCTGCGGGTAAAGGTTGCCGGTGAGCGTGAGCTGGGCCAACACCTGCac                                                                                                             >  4:136660‑M2/1‑147 (MQ=255)                                             ggCCTGGTACCGTTTGCGCGGCATCGGCAACCCACGCGACCGTGCAGTGTTC‑ATTACCCGCCAGGGCAATCGCATCAGCCCCCGGGCAGTGAGGCTGCGGGTgcaggtgttggcccagctcacgctcaccggcaacctttacccgcagc                                                                                                      <  2:329733‑M1/149‑48 (MQ=255)                                                  ggTACCGTTTGCGCGGCATCGGCAACCCACGCGACCGTGCAGTGTTC‑ATTACCCGCCAGGGCAATCGCATCAGCCCCCGGGCAGTGAGGCTGCGGGTAAAGGTTGCCGGTGAGCGTGAGCTGGGCCAACACCTGc                                                                                                               >  8:116027/1‑135 (MQ=255)                                                  ggTACCGTTTGCGCGGCATCGGCAACCCACGCGACCGTGCAGTGTTC‑ATTACCCGCCAGGGCAATCGCATCAGCCCCCGGGCAGTGAGGCTGCGGGTAAAGGTTGCCGGTGAGCGTGAGCTGGGCCAACACCTGc                                                                                                               <  7:116027/135‑1 (MQ=255)                                                    tACCGTTTGCGCGGCATCGGCAACCCACGCGACCGTGCAGTGTTC‑ATTACCCGCCAGGGCAATCGCATCAGCCCCCGGGCAGTGAGGCTGCGGGTATAGGTTGCCGGTGAGCGTGAGCTGGGCCAACACCTGCACCCGCACATGCTTCg                                                                                               <  1:94992/149‑1 (MQ=255)                                                        gTTTGCGCGGCATCGGCAACCCACGCGACCGTGCAGTGTTC‑ATTACCCGCCAGGGCAATCGCATCAGCCCCCGGGCAGTGAGGCTGCGGGTAAAGGTTGCCGGTGAGCGTGAGCTGGGCCAACACCTGCACCCGCACATGCTTCGCCAt                                                                                           <  1:146405/149‑1 (MQ=255)                                                              gcgGCATCGGCAACCCACGCGACCGTGCAGTGTTC‑ATTACCCGCCAGGGCAATCGCATCAGCCCCCGGGCAGTGAGGCTGCGGGTAAAGGTTGCCGGTGAGCGTGAGCTGGGCCAACACCTGCCCCCGCACATGCTTCGCCAT‑‑TCCTTc                                                                                   >  5:330469/1‑149 (MQ=255)                                                              gcgGCATCGGCAACCCACGCGACCGTGCAGTGTTC‑ATTACCCGCCAGGGCAATCGCATCAGCCCCCGGGCAGTGAGGCTGCGGGTAAAGGTTGCCGGTGAGCGTGAGCTGGGCCAACACCTGCACCCGCACATGCTTCGCCAT‑‑TCCTTc                                                                                   <  4:84784/149‑1 (MQ=255)                                                                  cATCGGCAACCCACGCGACCGTGCAGTGTTC‑ATTACCCGCCAGGGCAATCGCATCAGCCCCCGGGCAGTGAGGCTGCGGGTAAAGGTTGCCGGTGAGCGTGAGCTGGGCCAACACCTGCacc                                                                                                            >  4:68695‑M2/1‑119 (MQ=255)                                                                  cATCGGCAACCCACGCGACCGTGCAGTGTTC‑ATTACCCGCCAGGGCAATCGCATCAGCCCCCGGGCAGTGAGGCTGCGGGTAAAGGTTGCCGGTGAGCGTGAGCTGGGCCAACACCTGCacc                                                                                                            <  3:68695‑M2/122‑4 (MQ=255)                                                                    tCGGCAACCCACGCGACCGTGCAGTGTTC‑ATTACCCGCCAGGGCAATCGCATCAGCCCCCGGGCAGTGAGGCTGCGGGTgcaggtgttggcccagctcacgctcaccggcaacctttacccgcag                                                                                                       <  6:299555‑M1/125‑47 (MQ=255)                                                                    tCGGCAACCCACGCGACCGTGCAGTGTTC‑ATTACCCGCCAGGGCAATCGCATCAGCCCCCGGGCAGTGAGGCTGCGGGTgcaggtgttggcccagctcacgctcaccggcaacctttacccgcag                                                                                                       >  5:299555‑M1/1‑79 (MQ=255)                                                                    tCGGCAACCCACGCGACCGTGCAGTGTTC‑ATTACCCGCCAGGGCAATCGCATCAGCCCCCGGGCAGTGAGGCTGCGGGTAAAGGTTGCCGGTGAGCGTGAGCTGGGCCAACACCTGc                                                                                                               <  3:320250/117‑1 (MQ=255)                                                                    tCGGCAACCCACGCGACCGTGCAGTGTTC‑ATTACCCGCCAGGGCAATCGCATCAGCCCCCGGGCAGTGAGGCTGCGGGTAAAGGTTGCCGGTGAGCGTGAGCTGGGCCAACACCTGc                                                                                                               >  4:320250/1‑117 (MQ=255)                                                                      ggCAACCCACGCGACCGTGCAGTGTTC‑ATTACCCGCCAGGGCAATCGCATCAGCCCCCGGGCAGTGAGGCTGCGGGTAAAGGTTGCCGGTGAGCGTGAGCTGGGCCAACACCTGCACCCGCACATGCTTCGCCAT‑‑TCCTTCgccagcc                                                                            <  2:227942/148‑1 (MQ=255)                                                                      ggCAACCCACGCGACCGTGCAGTGTTC‑ATTACCCGCCAGGGCAATCGCATCAGCCCCCGGGCAGTGAGGCTGCGGGTAAAGGTTGCCGGTGAGCGTGAGCTGGGCCAACAACTGCACCCGCACATGCTTCGCCAT‑‑TCCTTCgccagcc                                                                            <  2:302559/148‑1 (MQ=255)                                                                       gCAACCCACGCGACCGTGCAGTGTTC‑ATTACCCGCCAGGGCAATCGCATCAGCCCCCGGGCAGTGAGGCTGCGGGTAAAGGTTGCCGGTGAGCGTGAGCTGGGCCAACACCTGCACCCGCACATGCTTCGCCAT‑‑TCCTTCGCCAGCCAt                                                                          >  3:359560/1‑149 (MQ=255)                                                                        cAACCCACGCGACCGTGCAGTGTTC‑ATTACCCGCCAGGGCAATCGCATCAGCCCCCGGGCAGTGAGGCTGCGGGTAAAGGTTGCCGGTGAGCGTGAGCTGGGCCAACACCTGCACCCGCACATGc                                                                                                   >  3:79884/1‑125 (MQ=255)                                                                        cAACCCACGCGACCGTGCAGTGTTC‑ATTACCCGCCAGGGCAATCGCATCAGCCCCCGGGCAGTGAGGCTGCGGGTAAAGGTTGCCGGTGAGCGTGAGCTGGGCCAACACCTGCACCCGCACATGc                                                                                                   <  4:79884/125‑1 (MQ=255)                                                                            ccACGCGACCGTGCAGTGTTC‑ATTACCCGCCAGGGCAATCGCATCAGCCCCCGGGCAGTGAGGCTGCGGGTAAAGGTTGCCGGTGAGCGTGAGCTGGGCCAACACCTGCACCCGCACATGCTTCGCCAT‑‑TCCTTCGCCAGCCATGTGCt                                                                     <  5:33427/149‑1 (MQ=255)                                                                                gcgACCGTGCTGTGTTC‑ATTAGGCGCCAGGGCAATCGCATCAGCGCCGGGGCAGTGAGGCTGCGGGTTATGGTTGCCGGTGAGCGTGAGCTGGGCCAACACCTGCACCCGCACATGCTTCGCCAT‑‑TCCTTCGCCAGCCATGTGCTGGaa                                                                 <  3:115859/149‑1 (MQ=255)                                                                                gcgACCGTGCAGTGTTC‑ATTACCCGCCAGGGCAATCGCATCAGCCCCCGGGCAGTGAGGCTGCGGGTAAAGGTTGCCGGTGAGCGTGAGCTGGGCCAACACCTGCACCCGCACATGCTTCGCCAT‑‑TCCTTCGCCAGCCATGTGCTGGaa                                                                 <  3:110625/149‑1 (MQ=255)                                                                                  gACCGTGCAGTGTTC‑ATTACCCGCCAGGGCAATCGCATCAGCCCCCGGGCAGTGAGGCTGCGGGTAAAGGTTGCCGGTGAGCGTGAGCTGGGCCAACACCTGCACCCGCACATGCTTCGCCAT‑‑TCCTTCGCCAGCCATGTGCTGGAat                                                                >  4:60054/1‑148 (MQ=255)                                                                                      gTGCAGTGTTC‑ATTACCCGCCAGGGCAATCGCATCAGCCCCCGGGCAGTGAGGCTGCGGGTAAAGGTTGCCGGTGAGCGTGAGCTGGGCCAACACCTGCACCCGCACATGCTTCGCCAT‑‑TCCTTCGCCAGCCATGTGCTGGAATCATcc                                                           >  1:89933/1‑149 (MQ=255)                                                                                              ttC‑ATTACCCGCCAGGGCAATCGCATCAGCCCCCGGGCAGTGAGGCTGCGGGTAAAGGTTGCCGGTGAGCGTGAGCTGGGCCAACACCTGCACCCGCACATGCTTCGCCAT‑‑TCCTTCGCCAGCCATGTGCTGGAATCATCCCAGGACCt                                                   >  7:108450/1‑149 (MQ=255)                                                                                                  aTTACCCGCCAGGGCAATCGCATCAGCCCCCGGGCAGTGAGGCTGCGGGTAAAGGTTGCCGGTGAGCGTGAGCTGGGCCAACACCTGCACCCGCACATGCTTCGCCAT‑‑TCCTTCGCCAGCCATGTGCTGGAATCATCCCAGGACCTgcg                                                >  5:375796/1‑149 (MQ=255)                                                                                                  aTTACCCGCCAGGGCAATCGCATCAGCCCCCGGGCAGTGAGGCTGCGGGTAAAGGTTGCCGGTGAGCGTGAGCTGGGCCAACACCTGCACCCGCACATGCTTCGCCAT‑‑TCCTTCGCCAGCCATGTGCTGGAATCATCCCAGGACCTgcg                                                >  2:133167/1‑149 (MQ=255)                                                                                                  aTTACCCGCCAGGGCAATCGCATCAGCCCCCGGGCAGTGAGGCTGCGGGTAAAGGTTGCCGGTGAGCGTGAGCTGGGCCAACACCTGCACCCGCACATGCTTCGCCAT‑‑TCCTTCGCCAGCCATGTGCTGGAATCATCCCAGGACCTgc                                                 <  5:40927/148‑1 (MQ=255)                                                                                                   ttACCCGCCAGGGCAATCGCATCAGCCCCCGGGCAGTGAGGCTGCGGGTAAAGGTTGCCGGTGAGCGTGAGCTGGGCCAACACCTGCACCCGCACATGCTTCGCCAT‑‑TCCTTCGCCAGCCATGTGCTGGAATCATCCCAGGACCTgcgc                                               <  6:330469/149‑1 (MQ=255)                                                                                                         gCCAGGGCAATCGCATCAGCCCCCGGGCAGTGAGGCTGCGGGTAAAGGTTGCCGGTGAGCGTGAGCTGGGCCAACACCTGCACCCGCACATGCTTCGCCAT‑‑TCCTTCGCCAGCCATGTGCTGGAATCATCCCAGGACCTGCGCGCGGTg                                         <  3:60054/149‑1 (MQ=255)                                                                                                         gCCAGGGCAATCGCATCAGCCCCCGGGCAGTGAGGCTGCGGGTAAAGGTTGCCGGTGAGCGTGAGCTGGGCCAACACCTGCACCCGCACATGCTTCGCCAT‑‑TCCTTCGCCAGCCATGTGCTGGAATCATCCCAGGACCTGCGCGCGGTg                                         >  5:70439/1‑149 (MQ=255)                                                                                                          ccAGGGCAATCGCATCAGCCCCCGGGCAGTGAGGCTGCGGGTAAAGGTTGCCGGTGAGCGTGAGCTGGGCCAACACCTGCACCCGCACATGCTTCGCCAT‑‑TCCTTCGCCAGCCATGTGCTGGAATCATCCCAGGACCTGCGCGCGGTGc                                        <  6:375796/149‑1 (MQ=255)                                                                                                            aGGGCAATCGCATCAGCCCCCGGGCAGTGAGGCTGCGGGTAAAGGTTGCCGGTGAGCGTGAGCTGGGCCAACACCTGCACCCGCACATGCTTCGCCAT‑‑TCCTTCGCCAGCCATGTGCTGGAATCATCCCAGGACCTGCGCGCGGTGCAg                                      >  7:218747/1‑149 (MQ=255)                                                                                                                     gCATCAGCCCCCGGGCAGTGAGGCTGCGGGTAAAGGTTGCCGgtga                                                                                                                                      >  4:60832/1‑46 (MQ=255)                                                                                                                     gCATCAGCCCCCGGGCAGTGAGGCTGCGGGTAAAGGTTGCCGgtga                                                                                                                                      <  3:60832/46‑1 (MQ=255)                                                                                                                      cATCAGCCCCCGGGCAGTGAGGCTGCGGGTAAAGGTTGCCGGTGAGCGTGAGCTGGGCCAACACCTGCACCCGCACATGCTTCGCCAT‑‑TCCTTCGCCAGCCATGTGCTGGAATCATCCCAGGACCTGCGCGCGGTGCAGGAGATGCTCg                            >  6:293461/1‑149 (MQ=255)                                                                                                                       aTCAGCCCCCGGGCAGTGAGGCTGCGGGTAAAGGTTGCCGGTGAGCGTGAGCTGGGCCAACACCTGCACCCGCACATGCTTc                                                                                                >  3:12985/1‑82 (MQ=255)                                                                                                                       aTCAGCCCCCGGGCAGTGAGGCTGCGGGTAAAGGTTGCCGGTGAGCGTGAGCTGGGCCAACACCTGCACCCGCACATGCTTc                                                                                                <  4:12985/82‑1 (MQ=255)                                                                                                                       aTCAGCCCCCGGGCAGTGAGGCTGCGGGTAAAGGTTGCCGGTGAGCGTGAGCTGGGCCAACACCTGCACCCGCACATGCTTCGCCAT‑‑TCCTTCGCCAGCCATGTGCTGGAATCATCCCAGGACCTGCGCGCGGTGCAGGAGATGCTCgg                           <  4:149706/149‑1 (MQ=255)                                                                                                                       aTCAGCCCCCGGGCAGTGAGGCTGCGGGTAAAGGTTGCCGGTGAGCGTGAGCTGGGCCAACACCTGCACCCGCACATGCTTCGCCAT‑‑TCCTTCGCCAGCCATGTGCTGGAATCATCCCAGGACCTGCGCGCGGTGCAGGAGATGCACgg                           >  5:91215/1‑149 (MQ=255)                                                                                                                        tCAGCCCCCGGGCAGTGAGGCTGCGGGTAAAGGTTGCCGGTGAGCGTGAGCTGGGCCAACACCTGCACCCGCACATGCTTCGCCAT‑‑TCCTTCGCCAGCCATGTGCTGGAATCATCCCAGGACCTGCGCGCGGTGCAGGAGATGCTCGGc                          >  3:77752/1‑149 (MQ=255)                                                                                                                         cAGCCCCCGGGCAGTGAGGCTGCGGGTAAAGGTTGCCGGTGAGCGTGAGCTGGGCCAACACCTGCACCCGCACATGCTTCGCCAT‑‑TCCTTCGCCAGCCATGTGCTGGAATCATCCCAGGACCTGCGCGCGGTGCAGGAGATGCTCGGc                          >  5:382612/1‑148 (MQ=255)                                                                                                                                cGGGCAGTGAGGCTGCGGGTAAAGGTTGCCGGTGAGCGTGAGCTGGGCCAACACCTGCACCCGCACATGCTTCGCCAT‑‑TCCTTCGCCAGCCATGTGCTGGAATCATCCCAGGACCTGCGCGCGGTGCAGGAGATGCTCGGCCACGCCGa                  <  5:369662/149‑1 (MQ=255)                                                                                                                                   gCAGTGAGGCTGCGGGTAAAGGTTGCCGGTGAGCGTGAGCTGGGCCAACACCTGCACCCGCACATGCTTCGCCAT‑‑TCCTTCGCCAGCCATGTGCTGGAATCATCCCAGGACCTGCGCGCGGTGCAGGAGATGCTCGGCCACGCCGACAt               <  1:194498/149‑1 (MQ=255)                                                                                                                                     aGTGAGGCTGCGGGTAAAGGTTGCCGGTGAGCGTGAGCTGTGCCAACACCTGCACCCGCACATGCTTGGCCAT‑‑TCCTTCGCCAGCCATGTGCTGGAATCATCCCAGGACCTGCGCGCGGTGCAGGAGATGCTCGGCCACGCCGACATCa             <  2:179383/149‑1 (MQ=255)                                                                                                                                           gCTGCGGGTAAAGGTTGCCGGTGAGCGTGAGCTGGGCCAACACCTGCacccgcagcctcactgcccgggggctgatgcgattgccctggcgggtaatgaacactgcacggtcgcgtgggttgccgatgccgcgcaaacggtaccaggcc         <  2:329733‑M2/149‑103 (MQ=255)                                                                                                                                            cTGCGGGTAAAGGTTGCCGGTGAGCGTGAGCTGGGCCAACACCTGCacccgcagcctcactgcccgggggctgatgcgattgccctggcgggtaatgaacactgcacggtcgcgtgggttgccga                                <  6:299555‑M2/125‑80 (MQ=255)                                                                                                                                            cTGCGGGTAAAGGTTGCCGGTGAGCGTGAGCTGGGCCAACACCTGCacccgcagcctcactgcccgggggctgatgcgattgccctggcgggtaatgaacactgcacggtcgcgtgggttgccga                                >  5:299555‑M2/1‑46 (MQ=255)                                                                                                                                               cGGGTAAAGGTTGCCGGTGAGCGTGAGCTGGGCCAACACCTGCACCCGCACATGCTTCGCCAT‑‑TCCTTCGCCAGCCATGTGCTGGAATCATCCCAGGACCTGCGCGCGGTGCAGGAGATGCTCGGCCACGCCGACATCAGCacgacg     <  2:89933/147‑1 (MQ=255)                                                                                                                                                gggTAAAGGTTGCCGGTGAGCGTGAGCTGGGCCAACACCTGCACCCGCACATGCTTCGCCAT‑‑TCCTTCGCCAGCCATGTGCTGGAATCATCCCAGGACCTGCGCGCGGTGCAGGAGATGCTCGGCCACGCCGACAACAGCACGACGCaa  <  5:318208/149‑1 (MQ=255)                                                                                                                                                 ggTgcaggtgttggcccagctcacgctcaccggcaacctttacccgcagcctcactgcccgggggctgatgcgattgccctggcgggtaatgaacactgcacggtcgcgtgggttgccgatg                              >  4:68695‑M1/1‑3 (MQ=255)                                                                                                                                                 ggTgcaggtgttggcccagctcacgctcaccggcaacctttacccgcagcctcactgcccgggggctgatgcgattgccctggcgggtaatgaacactgcacggtcgcgtgggttgccgatg                              <  3:68695‑M1/122‑120 (MQ=255)                                                                                                                                                  gTgcaggtgttggcccagctcacgctcaccggcaacctttacccgcagcctcactgcccgggggctgatgcgattgccctggcgggtaatgaacactgcacggtcgcgtgggttgccgatgccgcgcaaacggtaccaggcctgcaacg  >  4:136660‑M1/1‑2 (MQ=255)                                                                                                                                                  gTgcaggtgttggcccagctcacgctcaccggcaacctttacccgcagcctcactgcccgggggctgatgcgattgccctggcgggtaatgaacactgcacggtcgcgtgggttgccgatgccgcgcaaacggtaccaggcctgcaacg  >  8:249039‑M1/1‑2 (MQ=255)                                                                                                                                                  gTAAAGGTTGCCGGTGAGCGTGAGCTGGGCCAACACCTGCACCCGCACATGCTTCGCCATAGTCCTTCGCCAGCCATGTGCTGGAATCATCCCAGGACCTGCGCGCGGTGCAGGAGATGCTCGGCCACGCCGACATCAGCACGACGCa   >  1:108989/1‑148 (MQ=255)                                                                                                                                                   |                                                                                                                                                    GCCCGCGTACTGCCGGTGGGTCGCAAGGCTCGCGAGGCGTTGCAGGCCTGGTACCGTTTGCGCGGCATCGGCAACCCACGCGACCGTGCAGTGTTC‑ATTACCCGCCAGGGCAATCGCATCAGCCCCCGGGCAGTGAGGCTGCGGGTAAAGGTTGCCGGTGAGCGTGAGCTGGGCCAACACCTGCACCCGCACATGCTTCGCCAT‑‑TCCTTCGCCAGCCATGTGCTGGAATCATCCCAGGACCTGCGCGCGGTGCAGGAGATGCTCGGCCACGCCGACATCAGCACGACGCAA  >  NC_002947/5964430‑5964720

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.