New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	319049 =	62 (1.030)	3 (0.050)	3/248	NT	5.7%	coding (693/1815 nt)	PP_0264	sensor histidine kinase
	?	NC_002947	319095 =	41 (0.720)					coding (647/1815 nt)	PP_0264	sensor histidine kinase

CGAGCGATCAACCAGCGTGCGCGGGGCGAGGATGCTGACTTGCCAACCAGTTTCCTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTC‑AGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTT  >  NC_002947/318902‑319195                                                                                                                                                    |                                                                                                                                                    cGAGCGATCAACCAGCGTGCGCGGGGCGAGGATGCTGACTTGCCAACCAGTTTCCTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCt                                                                                                                                                    >  6:328213/1‑149 (MQ=255)   cggccgtgcgcgaccgcgagcggatcgtcggcgtgctggtggtcaaagtcgatctcgaccacaccgaaaccctgtggggccgtacgcccgagcagctgttgctgaccgatcacaatggcgtggtcatcctgacttcgcggcccgaCTgg                                                                                                                                                  >  6:176120‑M1/146‑149 (MQ=255)   cggccgtgcgcgaccgcgagcggatcgtcggcgtgctggtggtcaaagtcgatctcgaccacaccgaaaccctgtggggccgtacgcccgagcagctgttgctgaccgatcacaatggcgtggtcatcctgacttcgcggcccgaCTgg                                                                                                                                                  >  2:294661‑M1/146‑149 (MQ=255)   cggccgtgcgcgaccgcgagcggatcgtcggcgtgctggtggtcaaagtcgatctcgaccacaccgaaaccctgtggggccgtacgcccgagcagctgttgctgaccgatcacaatggcgtggtcatcctgacttcgcggcccgaCTgg                                                                                                                                                  >  4:73747‑M1/146‑149 (MQ=255)    gCGATCAACCAGCGTGCGCGGGGCGAGGATGCTGACTTGCCAACCAGTTTCCTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTgg                                                                                                                                                  <  8:118919/148‑1 (MQ=255)    gCGATCAACCAGCGTGCGCGGGGCGAGGATGCTGACTTGCCAACCAGTTTCCTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTgg                                                                                                                                                  >  7:118919/1‑148 (MQ=255)     cGATCAACCAGCGTGCGCGGCGCGAGGATGCTGACTTGCCAACCAGTTTCCTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGgcg                                                                                                                                                >  5:355486/1‑149 (MQ=255)       cgtgcgcgaccgcgagcggatcgtcggcgtgctggtggtcaaagtcgatctcgaccacaccgaaaccctgtggggccgtacgcccgagcagctgttgctgaccgatcacaatggcgtggtcatcctgacttcgcggcccgaCTGGCGCt                                                                                                                                              >  5:371654‑M1/142‑149 (MQ=255)       aTCAACCAGCGTGCGCGGGGCGAGGATGCTGACTTGCCAACCAGTTTCCTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCt                                                                                                                                              <  2:39561/149‑1 (MQ=255)       aTCAACCAGCGTGCGCGGGGCGAGGATGCTGACTTGCCAACCAGTTTCCTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCt                                                                                                                                              <  2:45096/149‑1 (MQ=255)             cAGGGTGCGCGGGGCGAGGATGCTGACTTGCCAACCAGTTTCCTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGt                                                                                                                                        <  3:251388/149‑1 (MQ=255)              aGCGTGCGCGGGGCGAGGATGCTGACTTGCCAACCAGTTTCCTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTc                                                                                                                                       >  2:343146/1‑149 (MQ=255)               gCGTGCGCGGGGCGAGGATGCTGACTTGCCAACCAGTTTCCTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCg                                                                                                                                      <  6:42997/149‑1 (MQ=255)                        gggCGAGGATGCTGACTTGCCAACCAGTTTCCTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCACCGGCTGTGGGGCATGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTC‑AGCATg                                                                                                                            >  7:270658/1‑149 (MQ=255)                          gCGAGGATGCTGACTTGCCAACCAGTTTCCTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGTCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGgcg                                                                                                                                                <  4:78886/128‑1 (MQ=255)                          gCGAGGATGCTGACTTGCCAACCAGTTTCCTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGgcg                                                                                                                                                >  3:78886/1‑128 (MQ=255)                           cGAGGTTGCGGACTTGCCACCCTGTTTCCTTGATGGCGCTGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTC‑AGCGTGCgg                                                                                                                         <  8:341106/149‑1 (MQ=255)                            gAGGATGCTGACTTGCCAACCAGTTTCCTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTC‑AGCGTGCggg                                                                                                                        >  7:195956/1‑149 (MQ=255)                            gAGGATGCTGACTTGCCAACCAGTTTCCTTGATGTCGCGGGTCTGGGAGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGt                                                                                                                                        <  4:37637/134‑1 (MQ=255)                            gAGGATGCTGACTTGCCAACCAGTTTCCTTGATGTCGCGGGTCTGGGAGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGt                                                                                                                                        >  3:37637/1‑134 (MQ=255)                                    tGACTTGCCAACCAGTTTCCTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTC‑AGCGTGCGGGTAGCACg                                                                                                                 >  2:376184/1‑148 (MQ=255)                                        ttGCCAACCAGTTTCCTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTC‑AGCGTGCGGGTAGCAc                                                                                                                  <  5:277963/143‑1 (MQ=255)                                        ttGCCAACCAGTTTCCTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTC‑AGCGTGCGGGTAGCAc                                                                                                                  >  6:277963/1‑143 (MQ=255)                                            cAACCAGTTTCCTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTC‑AGCGTGCGGGTAGCACGGAAgcgc                                                                                                          >  2:280854/1‑147 (MQ=255)                                            cAACCAGTTTCCTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTC‑AGCGTGCGGGTAGCACGGAAgcgc                                                                                                          >  4:314843/1‑147 (MQ=255)                                             gcaaagtcgatctcgaccacaccgaaaccctgtggggccgtacgcccgagcagctgttgctgaccgatcacaatggcgtggtcatcctgacttcgcggcccgaCTGGCGCTCGGCGTCGGTC‑AGCGTGCGGGTAGCACGGAAGCGCCAg                                                                                                       >  1:358015‑M1/104‑149 (MQ=255)                                             aaCCAGTTTCCTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTC‑AGCGTGCGGGTAGCACGGAAGCGCCAg                                                                                                       >  3:145891/1‑149 (MQ=255)                                             aaCCAGTTTCCTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTC‑AGCGTGCGGGTAGCACGGAAGCGCCAg                                                                                                       >  1:178386/1‑149 (MQ=255)                                             aaCCAGTTTCCTTGATGTCGCGGGTCTGCGTGATCCACGCCTGCCGGTTGAGAACCAGCGGCTGTGGGGCGTGGGTCGGATAGGGCTGGATGGCGAAGATGGCCTGGCGCTCGGCGTCGGTC‑AGCGTGCGGGTAGCACGGAAGCGCCAg                                                                                                       >  2:177935/1‑149 (MQ=255)                                                 aGTTTCCTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTC‑AGCGTGCGGGTAGCACGGAAGCGCCAGTCgg                                                                                                   <  8:80394/149‑1 (MQ=255)                                                      ccTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCg                                                                                                                                      <  4:249571/110‑1 (MQ=255)                                                      ccTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCg                                                                                                                                      >  3:249571/1‑110 (MQ=255)                                                       cTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTC‑AGCGTGCGGGTAGCACGGAAGCGCCAGTCgg                                                                                                   <  3:355476/143‑1 (MQ=255)                                                       cTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTC‑AGCGTGCGGGTAGCACGGAAGCGCCAGTCgg                                                                                                   >  4:355476/1‑143 (MQ=255)                                                       cTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTC‑AGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCcgc                                                                                              >  2:352295/1‑148 (MQ=255)                                                          gATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTC‑AGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGaa                                                                                           <  1:352295/148‑1 (MQ=255)                                                          gATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTC‑AGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGaa                                                                                           <  5:65133/148‑1 (MQ=255)                                                               cgcgGGTGTGGGTGATCCATGCCTGGGGGTTGAGAACCATCGGCTGTGTGGCCTGGGTCGGATAGGGCTTGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTC‑AGCGTGCGGGTAGCACGGAAGCGCCAGTATGGCCGCGAAGTCAg                                                                                      <  8:270658/148‑1 (MQ=255)                                                                gcgGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTC‑AGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGa                                                                                    <  2:178386/149‑1 (MQ=255)                                                                gcgGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTC‑AGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGa                                                                                    <  6:282302/149‑1 (MQ=255)                                                                caccgaaaccctgtggggccgtacgcccgagcagctgttgctgaccgatcacaatggcgtggtcatcctgacttcgcggcccgaCTGGCGCTCGGCGTCGGTC‑AGCGTGCGGGTAGCACGGAAGCGCCAGt                                                                                                      >  1:370850‑M1/85‑131 (MQ=255)                                                                caccgaaaccctgtggggccgtacgcccgagcagctgttgctgaccgatcacaatggcgtggtcatcctgacttcgcggcccgaCTGGCGCTCGGCGTCGGTC‑AGCGTGCGGGTAGCACGGAAGCGCCAGt                                                                                                      <  2:370850‑M1/47‑1 (MQ=255)                                                                 cgGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTC‑AGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGAt                                                                                   <  1:343146/149‑1 (MQ=255)                                                                 cgGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTC‑AGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGAt                                                                                   <  7:228191/149‑1 (MQ=255)                                                                        gggTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTC‑AGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACg                                                                            >  5:213104/1‑149 (MQ=255)                                                                             aTCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTC‑AGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCAtt                                                                       >  2:299870/1‑149 (MQ=255)                                                                              tCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTC‑AGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATtg                                                                      <  6:355486/149‑1 (MQ=255)                                                                               ccAGGGCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTC‑AGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACGACGCCATtg                                                                      <  4:56693/148‑1 (MQ=255)                                                                               ccAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTC‑AGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGACGCGAAGTCAGGATGCCCACGCCATtgt                                                                     >  5:96982/1‑149 (MQ=255)                                                                                cAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTC‑AGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATtgt                                                                     <  1:299870/148‑1 (MQ=255)                                                                                cAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTC‑AGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATtgt                                                                     <  3:314843/148‑1 (MQ=255)                                                                                cAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTC‑AGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATtgt                                                                     <  1:280854/148‑1 (MQ=255)                                                                                cAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCGGGGTCGGATAGGGCTGTATGGCTATGATGGCCTGGCGCTCGGCGTCGGTCTAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATtg                                                                      <  1:109097/148‑1 (MQ=255)                                                                                        cGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTC‑AGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCa                                                            <  5:328213/149‑1 (MQ=255)                                                                                           gTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTC‑AGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCAGCa                                                         <  4:145891/149‑1 (MQ=255)                                                                                                gaACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTC‑AGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATc                                                                 >  3:189082/1‑136 (MQ=255)                                                                                                gaACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTC‑AGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATc                                                                 <  4:189082/136‑1 (MQ=255)                                                                                                   ccAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTC‑AGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAg                                                                                      <  8:221520/112‑1 (MQ=255)                                                                                                   ccAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTC‑AGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAg                                                                                      >  7:221520/1‑112 (MQ=255)                                                                                                    cAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTC‑AGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCAGCAACAgctgct                                                >  3:43140/1‑149 (MQ=255)                                                                                                       cGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTC‑AGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCAGCAACAGCTGCTCgg                                             <  6:213104/149‑1 (MQ=255)                                                                                                              ggggCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTC‑AGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACg                                      <  4:284354/149‑1 (MQ=255)                                                                                                                     gggTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTC‑AGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCca                                >  3:33031/1‑148 (MQ=255)                                                                                                                      ggTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTC‑AGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCcaca                              <  1:177935/149‑1 (MQ=255)                                                                                                                      ggTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTC‑AGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCca                                >  8:142273/1‑147 (MQ=255)                                                                                                                        tCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTC‑AGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAgg                            <  7:183847/149‑1 (MQ=255)                                                                                                                                ggCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTC‑AGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGgt                    <  8:195956/149‑1 (MQ=255)                                                                                                                                     gATGGCGATGATGGCCTGGCGCTCGGCGTCGGTC‑AGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGt               >  6:334143/1‑149 (MQ=255)                                                                                                                                     gATGGCGATGATGGCCTGGCGCTCGGCGTCGGTC‑AGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGt               >  1:137274/1‑149 (MQ=255)                                                                                                                                     gATGGAGATCATGTCCTGGCGCTAGTAGTCCGTC‑AGAGTGAGCGTAGCACGGAAGCGCAAGTCGTGCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCAGCAACAGCTGCTAGGGAGTACGGCACCACAGGGTTTAGGTGTGGt               >  2:188441/1‑149 (MQ=255)                                                                                                                                           gatgatGGCCTGGCGCTCGGCGTCGGTC‑AGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTc              >  3:172913/1‑144 (MQ=255)                                                                                                                                           gatgatGGCCTGGCGCTCGGCGTCGGTC‑AGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGAt         <  4:172913/149‑1 (MQ=255)                                                                                                                                                  gCCTGGCGCTCGGCGTCGGTC‑AGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACttt  <  7:142273/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                    CGAGCGATCAACCAGCGTGCGCGGGGCGAGGATGCTGACTTGCCAACCAGTTTCCTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTC‑AGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTT  >  NC_002947/318902‑319195

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.