New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	402553 =	67 (1.110)	3 (0.050)	3/250	NT	5.9%	coding (645/669 nt)	msrA	peptide methionine sulfoxide reductase MsrA
	?	NC_002947	402652 =	32 (0.560)					coding (546/669 nt)	msrA	peptide methionine sulfoxide reductase MsrA

CGGGCTTATGTTCACCGGCTGCAGCTGCACACGCTCAAGCTGGCCGGTTTCGTGCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCTGGTGGTAGGCCTCGGCGAAATAGACGGTCGGTGCCTGGTCGATTTCGGTGGTGATCTCACCGAAGCCGGCCTTGCTCAGCTCGGCCT  >  NC_002947/402406‑402701                                                                                                                                                    |                                                                                                                                                     cgccagggcaacgacatcggcacccagtaccgctcggccatctactgcaccagcccggaacagctggaacaggccaaggccagccgcgacgccttccaggccgagctgagcaaggccggcttcggtgagatcaccaccgaaatcgacc                                                                                                                                                      >  1:165619‑M1/148‑148 (MQ=255) cgccagggcaacgacatcggcacccagtaccgctcggccatctactgcaccagcccggaacagctggaacaggccaaggccagccgcgacgccttccaggccgagctgagcaaggccggcttcggtgagatcaccaccgaaatcgacCa                                                                                                                                                     >  1:255557‑M1/148‑149 (MQ=255)  gggCTTATGTTCACCGGCTGCAGCTGCACACGCTCAAGCTGGCCGGTTTCGTGCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTggcag                                                                                                                                                    <  3:128508/149‑1 (MQ=255)   ggCTTATGTTCACCGGCTGCAGCTGCACACGCTCAAGCTGGCCGGTTTCGTGCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTggcagg                                                                                                                                                   <  4:220928/149‑1 (MQ=255)   ccagggcaacgacatcggcacccagtaccgctcggccatctactgcaccagcccggaacagctggaacaggccaaggccagccgcgacgccttccaggccgagctgagcaaggccggcttcggtgagatcaccaccgaaatcgacCAgg                                                                                                                                                   >  2:333898‑M1/146‑149 (MQ=255)    cagggcaacgacatcggcacccagtaccgctcggccatctactgcaccagcccggaacagctggaacaggccaaggccagccgcgacgccttccaggccgagctgagcaaggccggcttcggtgagatcaccaccgaaatcgacCAgg                                                                                                                                                   <  8:270128‑M1/4‑1 (MQ=255)        aTGTTCACCGGCTGCAGCTGCACACGCTCAAGCTGGCCGGTTTCGTGCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACATTGCAGGCTGGGTGGCAGGCacac                                                                                                                                              >  4:257581/1‑149 (MQ=255)         tGTTCACCGGCTGCAGCTGCACACGCTCAAGCTGGCCGGTTTCGTGCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCacac                                                                                                                                              <  6:270725/148‑1 (MQ=255)          gTTCACCGGCTGCAGCTGCACACGCTCAAGCTGGCCGGTTTCGTGCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGc                                                                                                                                            >  6:314975/1‑149 (MQ=255)           ttCACCGGCTGCAGCTGCACACGCTCAAGCTGGCCGGTTTCGTGCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGcc                                                                                                                                           >  7:65850/1‑149 (MQ=255)            tCACCGGCTGCAGCTGCTCACGCTCAAGCTGGCCGGTTTCGTGCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCg                                                                                                                                          >  8:16108/1‑149 (MQ=255)             cACCGGCTGCAGCTGCACACGCTCAAGCTGGCCGGTTTCGTGCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCgg                                                                                                                                         >  7:279806/1‑149 (MQ=255)              aCCGGCTGCAGCTGCACACGCTCAAGCTGGCCGGTTTCGTGCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCgg                                                                                                                                         <  8:140331/148‑1 (MQ=255)              aCCGGCTGCAGCTGCACACGCTCAAGCTGGCCGGTTTCGTGCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGt                                                                                                                                        <  7:74140/149‑1 (MQ=255)              aCCGGCTGCAGCTGCACACGCTCAAGCTGGCCGGTTTCGTGCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGt                                                                                                                                        <  6:296821/149‑1 (MQ=255)               ccGGCTGCAGCTGCACACGCTCAAGCTGGCCGGTTTCGTGCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTg                                                                                                                                       >  3:353983/1‑149 (MQ=255)                   ctgcagctgcaCACGCTCAAGCTGGCCGGTTTCGTGCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGTGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTgccgc                                                                                                                                   <  5:229957/149‑1 (MQ=255)                      cagctgcaCACGCTCAAGCTGGCCGGTTTCGTGCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTgccgcc                                                                                                                                  <  3:251778/147‑1 (MQ=255)                      cagctgcaCACGCTCAAGCTGGCCGGTTTCGTGCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGa                                                                                                                                <  5:314975/149‑1 (MQ=255)                       agctgcaCACGCTCAAGCTGGCCGGTTTCGTGCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGAt                                                                                                                               <  5:339158/149‑1 (MQ=255)                        gctgcaCACGCTCAAGCTGGCCGGTTTCGTGCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATg                                                                                                                              >  5:250785/1‑149 (MQ=255)                           gcaCACGCTCAAGCTGGCCGGTTTCGTGCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCg                                                                                                                           <  6:355359/149‑1 (MQ=255)                            cacaCGCTCAAGCTGGCCGGTTTCGTGCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCg                                                                                                                           <  4:162280/148‑1 (MQ=255)                            cacaCGCTCAAGCTGGCCGGTTTCGTGCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCg                                                                                                                           <  6:360832/148‑1 (MQ=255)                            cacaCGCTCAAGCTGGCCGGTTTCGTGCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGc                                                                                                                          <  2:27841/149‑1 (MQ=255)                             acacGCTCAAGCTGGCCGGTTTCGTGCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCa                                                                                                                         <  7:145478/149‑1 (MQ=255)                              cacGCTCAAGCTGGCCGGTTTCGTGCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCg                                                                                                                           >  4:135235/1‑146 (MQ=255)                              cacGCTCAAGCTGGCCGGTTTCGTGCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGGGGAACAGGGTCATCGGGCTCATGCTTCAGTTACCTTGCAGGCTGGGGGGCAGGCACACGCCGGTGCCGCCGATGCCGCAg                                                                                                                        <  3:318989/149‑1 (MQ=255)                                 gCTCAAGCTGGCCGGTTTCGTGCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAg                                                                                                                     >  1:76888/1‑149 (MQ=255)                                   tCAAGCTGGCCGGTTTCGTGCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGcc                                                                                                                   >  1:238890/1‑149 (MQ=255)                                        cTGGCCGGTTTCGTGCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCg                                                                                                              <  8:65850/149‑1 (MQ=255)                                           gCCGGTTTCGTGCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCgg                                                                                                             <  4:249627/147‑1 (MQ=255)                                           gCCGGTTTCGTGCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGt                                                                                                           >  5:143678/1‑149 (MQ=255)                                            caggTTTCGTGCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGt                                                                                                           >  2:25681/3‑148 (MQ=255)                                             cGGTTTCGTGCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTc                                                                                                         >  2:360529/1‑149 (MQ=255)                                             cGGTTTCGTGCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTc                                                                                                         <  2:238890/149‑1 (MQ=255)                                                  tCGTGCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTgg                                                                                                     <  1:360529/148‑1 (MQ=255)                                                     tGCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAg                                                                                                 <  8:279806/149‑1 (MQ=255)                                                      gCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAgg                                                                                                >  1:157917/1‑149 (MQ=255)                                                       cAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAgg                                                                                                >  2:250179/1‑148 (MQ=255)                                                           accaccATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTActg                                                                                           <  1:270596/149‑1 (MQ=255)                                                            ccaccaTGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTActgc                                                                                          <  2:78247/149‑1 (MQ=255)                                                             caccaTGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTActgct                                                                                         <  3:97596/149‑1 (MQ=255)                                                               ccaTGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCtgg                                                                                       <  2:76888/149‑1 (MQ=255)                                                               ccaTGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCtgg                                                                                       >  8:167309/1‑149 (MQ=255)                                                               ccaTGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCtgg                                                                                       <  6:250785/149‑1 (MQ=255)                                                                caTGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTg                                                                                                      <  4:369971/133‑1 (MQ=255)                                                                caTGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTg                                                                                                      >  3:369971/1‑133 (MQ=255)                                                                caTGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCtggt                                                                                      >  7:228653/1‑149 (MQ=255)                                                                 aTGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCtggtg                                                                                     >  5:162227/1‑149 (MQ=255)                                                                     ccTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCTGGTGGTAg                                                                                 <  4:209313/149‑1 (MQ=255)                                                                         gccaaggccagccgcgacgccttccaggccgagctgagcaaggccggcttcggtgagatcaccaccgaaatcgacCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCTGGTGGTAGGCCt                                                                             <  4:109356‑M1/74‑1 (MQ=255)                                                                           gcACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCtgg                                                                                       <  7:355949/137‑1 (MQ=255)                                                                           gcACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCtgg                                                                                       >  8:355949/1‑137 (MQ=255)                                                                              cGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCTGGTGGTAGGCCTCGGCg                                                                        <  6:143678/149‑1 (MQ=255)                                                                               gAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGACACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCTGGTGGTAGGCCTCGGCg                                                                        >  5:92505/1‑148 (MQ=255)                                                                                 aaGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTAACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGCTTCTTGGCCAGGTACTGCTGGTGGTAGGCCTCGGCGaaa                                                                     <  6:194827/149‑1 (MQ=255)                                                                                   ggCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCTGGTGGTAGGCCTCGGCGAAATa                                                                   <  7:16108/149‑1 (MQ=255)                                                                                    gCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCTGGTGGTAGGCCTCGGCGaaa                                                                     >  1:361503/1‑146 (MQ=255)                                                                                    gCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCTGGTGGTAGGCCTCGGCGaaa                                                                     >  7:270128/1‑146 (MQ=255)                                                                                     cGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCTGGTGGTAGGCCTCGGCGAAATAGa                                                                 <  4:353983/149‑1 (MQ=255)                                                                                       ctaaCGGGGAGGGCAACAGTGGAAGCGTGCTCCTGCTTCAGTGACCTTGCAGGCGGGGGGGCAGGCACACGCCGGTGCCGCCGATGCCGCCGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCTGGTGGTAGGCCTCGGCGAAATAGAcg                                                               <  6:261796/147‑1 (MQ=255)                                                                                                   ggccgagctgagcaaggccggcttcggtgagatcaccaccgaaatcgacCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCTGGTGGTAGGCCTCGGCGAAATAGACGGTCGGTGCCTgg                                                   >  8:285867‑M1/50‑149 (MQ=255)                                                                                                     ccgagctgagcaaggccggcttcggtgagatcaccaccgaaatcgacCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCTGGTGGTAGGCCTCGGCGAAATAGACGGTCGGTGCCTGGTc                                                 >  3:109356‑M1/48‑149 (MQ=255)                                                                                                     aaCAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCTGGTGGTAGGCCTCGGCGAAATAGACGGTCGGTGCCTGGTc                                                 >  7:332627/1‑149 (MQ=255)                                                                                                                 gTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCTGGTGGTAGGCCTCGGCGAAATAGACGGTCGGTGCCTGGTCGATTTCggtggt                                     <  8:228653/149‑1 (MQ=255)                                                                                                                    cTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCTGGTGGTAGGCCTCGGCGAAATAGACGGTCGGTGCCTGGTCGATTTCGGTGGTGAt                                  <  2:157917/149‑1 (MQ=255)                                                                                                                       aTGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCTGGTGGTAGGCCTCGGCGAAATAGACGGTCGGTGCCTGGTCGATTTCGGTGGTGAtct                                >  2:272042/1‑148 (MQ=255)                                                                                                                        tGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCTGGTGGTAGGCCTCGGCGAAATAGACGGTCGGTGCCTGGTc                                                 <  7:127509/130‑1 (MQ=255)                                                                                                                        tGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCTGGTGGTAGGCCTCGGCGAAATAGACGGTCGGTGCCTGGTc                                                 >  8:127509/1‑130 (MQ=255)                                                                                                                         gCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGGCAGGTACTGCTGGTGGTAGGCCTCGGCGAAATAGACGGTCGGTGCCTGGTCGATTTCGGTGGTGATCTCAc                             >  1:122028/1‑149 (MQ=255)                                                                                                                                    cTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCTGGTGGTAGGCCTCGGCGAAATAGACGGTCGGTGCCTGGTCGATTTCGGTGGTGATCTCACCGAAGCCGGcc                  >  4:193506/1‑149 (MQ=255)                                                                                                                                     ttGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCTGGTGGTAGGCCTCGGCGAAATAGACGGTCGGTGCCTGGTCGATTTCGGTGGTGATCTCACCGAAGCCGGCCt                 >  5:105986/1‑149 (MQ=255)                                                                                                                                       tcAGGCTGTGTGGCAGGCACACGCGGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCTGGTGGTAGGCCTCGGCGAATTAGACGGTGGGTGCGTGGTCGATTTCggtg                                       <  6:318372/124‑1 (MQ=255)                                                                                                                                       gCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCTGGTGGTAGGCCTCGGCGAAATAGACGGTCGGTGCCTGGTCGATTTCGGTGGTGATCTCACCGAAGCCGGCCtt                <  3:135235/148‑1 (MQ=255)                                                                                                                                       gCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCTGGTGGTAGGCCTCGGCGAAATAGACGGTCGGTCCCTGGTGGATTTCggtg                                       >  5:318372/1‑125 (MQ=255)                                                                                                                                                gTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCTGGTGGTAGGCCTCGGCGAAATAGACGGTCGGTGCCTGGTCGATTTCGGTGGTGATCTCACCGAAGCCGGCCTTGCTCAGCTCg      <  3:193506/149‑1 (MQ=255)                                                                                                                                                gTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCTGGTGGTAGGCCTCGGCGAAATAGACGGTCGGTGCCTGGTCGATTTCGGTGGTGATCTCACCGAAGCCGGCCTTGCTCAGCTCg      >  4:70797/1‑149 (MQ=255)                                                                                                                                                  ggcaggcaCACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCTGGTGGTAGGCCTCGGCGAAATAGACGGGCGGTGCCTGGTCGATTTCGGTGGTGATCTCACCGAAGCCGGCCTTGCTCAGCTCGGc    <  4:287004/149‑1 (MQ=255)                                                                                                                                                    CAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCTGGTGGTAGGCCTCGGCGAAATAGACGGTCGGTGCCTGGTCGATTTCGGTGGTGATCTCACCGAAGCCGGCCTTGCTCAGCTCGGCCt  >  1:25681‑M1/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                     CGGGCTTATGTTCACCGGCTGCAGCTGCACACGCTCAAGCTGGCCGGTTTCGTGCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCTGGTGGTAGGCCTCGGCGAAATAGACGGTCGGTGCCTGGTCGATTTCGGTGGTGATCTCACCGAAGCCGGCCTTGCTCAGCTCGGCCT  >  NC_002947/402406‑402701

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.