BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 552188	84 (1.400)	5 (0.090)	5/254	NT	6.1%	coding (488/603 nt)	rplD	50S ribosomal protein L4
*	?	NC_002947	= 552215	73 (1.260)	5 (0.090)	5/254	NT	6.1%	coding (515/603 nt)	rplD	50S ribosomal protein L4

Only 100 of 103 total aligned reads displayed.

AGCGACCGTCTGGTCGTGGTTCAGGACTTCGCTGTTGAAGCACCGAAAACCAAAGA‑TCTGCTGAACAAGCTGAACGGCATGGGTCTGAGCGATGTACTGATCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTGATCACTGTCTCGGCCGTGAAGAAATTCGAGGAGCTGCTGGGATGAACCAGGAACGCGTATTCAAAGTCCTCCTTGGC  >  NC_002947/552040‑552335

aGCGACCGTCTGGTCGTGGTTCAGGACTTCGCTGTTGAAGCACCGAAAACCAAAGA‑TCTGCTGAACAAGCTGAACGGCATGGGTCTGAGCGATGTACTGATCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCT                                                                                                                                                      >  2:203388‑M1/1‑149 (MQ=255)

 gCGACCGTCTGGTCGTGGTTCAGGACTTCGCTGTTGAAGCACCGAAAACCAAAGA‑TCTGCTGAACAAGCTGAACGGCATGGGTCTGAGCGATGTACTGATCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTg                                                                                                                                                     >  2:229628/1‑149 (MQ=255)

      cGTCTGGTCGTGGTTCAGGACTTCACTGTTGAAGCACCGAAAACCAAAGA‑TCTGCTGAACAAGCTGAACGGCATGGGTCTGAGCGATGTACTGATCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCa                                                                                                                                                >  1:200061/1‑149 (MQ=255)

            gTCGTGGTTCAGGACTTCGCTGTTGAAGCACCGAAAACCAAAGA‑TCTGCTGAACAAGCTGAACGGCATGGGTCTGAGCGATGTACTGATCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGa                                                                                                                                          >  6:225137/1‑149 (MQ=255)

            gTCGTGGTTCAGGACTTCGCTGTTGAAGCACCGAAAACCAAAGA‑TCTGCTGAACAAGCTGAACGGCATGGGTCTGAGCGATGTACTGATCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGa                                                                                                                                          >  3:240015/1‑149 (MQ=255)

               gTGGTTCAGGACTTCGCTGTTGAAGCACCGAAAACCAAAGA‑TCTGCTGAACAAGCTGAACGGCATGGGTCTGAGCGATGTACTGATCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGacg                                                                                                                                        >  4:184838/1‑148 (MQ=255)

                  gTTCAGGACTTCCCTGTTGAACCACCGAAAACCAAAGA‑TCTTCTCTACAAGCTGACCGGCATGGGTCTGAGCGATGTACTGATCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGacgtac                                                                                                                                     <  4:51371/148‑1 (MQ=255)

                      aGGACTTCGCTGTTGAAGCACCGAAAACCAAAGA‑TCTGCTGAACAAGCTGAACGGCATGGGTCTGAGCGATGTACTGCTCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GAc                                                                                                                               >  6:359992/1‑149 (MQ=255)

                        gACTTCGCTGTTGAAGCACCGAAAACCAAAGA‑TCTGCTGAACAAGCTGAACGGCATGGGTCTGAGCGATGTACTGATCGTTTCCGACGCTGTTGATTAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGt                                                                                                                             <  6:381919/149‑1 (MQ=255)

                        gACTTCGCTGTTGAAGCACCGAAAACCAAAGA‑TCTGCTGAACAAGCTGAACGGCATGGGTCTGAGCGATGTACTGATCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGt                                                                                                                             <  7:62192/149‑1 (MQ=255)

                         aCTTCGCTGTTGAAGCACCGAAAACCAAAGA‑TCTGCTGAACAAGCTGAACGGCATGGGTCTGAGCGATGTACTGATCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTc                                                                                                                            <  1:203388/149‑1 (MQ=255)

                         aCTTCGCTGTTGAAGCACCGAAAACCAAAGA‑TCTGCTGAACAAGCTGAACGGCATGGGTCTGAGCGATGTACTGATCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTC‑ACGTACGTCGACGtg                                                                                                                            <  1:145779/149‑2 (MQ=255)

                           ttCGCTGTTGAAGCACCGAAAACCAAAGATTCTGCTGAACAAGCTGAAGGGCATGGGTCTGAGCGATGTACTGATCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTc                                                                                                                            >  1:220079/1‑148 (MQ=255)

                            tCGCTGTTGAAGCACCGAAAACCAAAGA‑TCTGCTGAACAAGCTGAACGGCATGGGTCTGAGCGATGTACTGATCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCa                                                                                                                          <  5:225137/148‑1 (MQ=255)

                             cGCTGTTGAAGCACCGAAAACCAAAGA‑TCTACTGAACAAGCTGAACGGCATGGGTCTGAGCGATGTACTGATCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCa                                                                                                                          <  7:46699/147‑1 (MQ=255)

                              gCTGTTGAAGCACCGAAAACCAAAGA‑TCTGCTGAACAAGCTGAACGGCATGGGTCTGAGCGATGTACTGATCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAagg                                                                                                                       <  4:138032‑M2/149‑4 (MQ=255)

                                tGTTGAAGCACCGAAAACCAAAGA‑TCTGCTGAACAAGCTGAACGGCATGGGTCTGAGCGATGTACTGATCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGGCGTACGT‑GACGTCCAaggtt                                                                                                                     <  3:147218‑M2/149‑6 (MQ=255)

                                  ttGAAGCACCGAAAACCAAAGA‑TCTGCTGAACAAGCTGAACGGCATGGGTCTGAGCGATGTACTGATCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTcc                                                                                                                   <  1:239999/149‑1 (MQ=255)

                                    gAAGCACCGAAAACCAAAGA‑TCTGCTGAACAAGCTGAACGGCATGGGTCTGAGCGATGTACTGATCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTtggacgtcacgtacgtcgacgtgcggcaggttac                                                                                                                    >  3:3879‑M1/1‑113 (MQ=255)

                                     aaGCACCGAAAACCAAAGA‑TCTGCTGAACAAGCTGAACGGCATGGGTCTGAGCGATGTACTGATCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTtggacgtcacgtacgtcgacgtgcggcaggttacga                                                                                                                  <  4:3879‑M1/148‑37 (MQ=255)

                                       gCACCGAAAACCAAAGA‑TCTGCTGAACAAGCTGAACGGCATGGGTCTGAGCGATGTACTGATCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTtggacgtcacgtacgtcgacgtgcggcagg                                                                                                                        >  8:144274‑M1/1‑110 (MQ=255)

                                       gCACCGAAAACCAAAGA‑TCTGCTGAACAAGCTGAACGGCATGGGTCTGAGCGATGTACTGATCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTtggacgtcacgtacgtcgacgtgcggcagg                                                                                                                        <  7:144274‑M1/140‑31 (MQ=255)

                                        cACCGAAAACCAAAGA‑TCTGCTGAACAAGCTGAACGGCATGGGTCTGAGCGATGTACTGATCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCg                                                                                                             >  2:75404/1‑149 (MQ=255)

                                          ccGAAAACCAAAGA‑TCTGCTGAACAAGCTGAACGGCATGGGTCTGAGCGATGTACTGCTCGTTTCCGACGCTGTTGATCAGAACCGGTACCGGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCCAGGTTCCGGCCCGGt                                                                                                           >  8:224065/1‑149 (MQ=255)

                                           cGAAAACCAAAGA‑TCTGCTGAACAAGCTGAACGGCATGGGTCTGAGCGATGTACTGATCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGGAACCTtggacgtcacgtacgtcgacgtgcggcaggttacgagcagcca                                                                                                           <  6:356419‑M1/149‑44 (MQ=255)

                                             aaaaCCAAAGA‑TCTGCTGAACAAGCTGAACGGCATGGGTCTGAGCGATGTACTGATCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAg                                                                                                        >  8:234952/1‑149 (MQ=255)

                                               aaCCAAAGA‑TCTGCTGAACAAGCTGAACGGCATGGGTCTGAGCGATGTACTGATCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTc                                                                                                      <  2:174765/149‑1 (MQ=255)

                                               aaCCAAAGA‑TCTGCTGAACAAGCTGAACGGCATGGGTCTGAGCGATGTACTGATCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTc                                                                                                      <  3:138680/149‑1 (MQ=255)

                                                 ccAAAGA‑TCTGCTGAACAAGCTGAACGGCATGGGTCTGAGCGATGTACTGATCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCt                                                                                                     >  7:26787/1‑148 (MQ=255)

                                                    aaGA‑TCTGCTGAACAAGCTGAACGGCATGGGTCTGAGCGATGTACTGATCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATc                                                                                                 <  5:224179/149‑1 (MQ=255)

                                                           tgctgAACAAGCTGAACGGCATGGGTCTGAGCGATGTACTGATCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATAc                                                                                           >  7:306187/1‑149 (MQ=255)

                                                               gAACAAGCTGAACGGCATGGGTCTGAGCGATGTACTGATCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACgag                                                                                        >  5:291196/1‑148 (MQ=255)

                                                                 aCAAGCTGAACGGCATGGGTCTGAGCGATGTACTGATCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGAGaa                                                                                      <  3:184838/148‑1 (MQ=255)

                                                                     gCTGAACGGCATGGGTCTGAGCGATGTACTGATCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGAGAAAgtgt                                                                                 >  8:171945/1‑149 (MQ=255)

                                                                      cTGAACGGCATGGGTCTGAGCGATGTACTGATCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTc                                                                                                                    >  5:267924/1‑113 (MQ=255)

                                                                      cTGAACGGCATGGGTCTGAGCGATGTACTGATCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTc                                                                                                                    <  6:267924/113‑1 (MQ=255)

                                                                         aaCGGCATGGGTCTGAGCGATGTACTGATCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTg                                                                               <  7:163264/147‑1 (MQ=255)

                                                                           cGGCATGGGTCTGAGCGATGTACTGATCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTGATCa                                                                           <  2:245268/149‑1 (MQ=255)

                                                                             gCATGGGTCTGAGCGATGTACTGATCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTGATCACt                                                                         <  2:205744/149‑1 (MQ=255)

                                                                             gCATGGGTCTGAGCGATGTACTGATCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTGATCACt                                                                         >  1:205744/1‑149 (MQ=255)

                                                                                tGGGTCTGAGCGATGTACTGATCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCAGACCCGGTCa                                                                                                         >  7:41725/1‑114 (MQ=255)

                                                                                  ggTCTGAGCGATGTACTGATCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGGCGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTGATCACTGtct                                                                     <  4:147218/148‑1 (MQ=255)

                                                                                  ggTCTGAGCGATGTACTGATCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTGATCACTGtctc                                                                    <  4:58069/149‑1 (MQ=255)

                                                                                  ggTCTGAGCGATGTACTGATCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTGATCACTGtct                                                                     <  8:26787/148‑1 (MQ=255)

                                                                                         gCGATGTACTGATCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGG‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTGATCACTGTCTCGGCCGt                                                              <  1:235072/148‑1 (MQ=255)

                                                                                          cGATGTACTGATCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTGATCACTGTCTCGGCCGTg                                                             >  2:220127/1‑148 (MQ=255)

                                                                                             tGTACTGATCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTGATCACTGTCTCGGCCGTgaag                                                          >  1:181469/1‑148 (MQ=255)

                                                                                              gTACTGATCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTGATCACTGTCTCGGCCGt                                                              <  5:352455/143‑1 (MQ=255)

                                                                                              gTACTGATCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTGATCACTGTCTCGGCCGt                                                              >  6:352455/1‑143 (MQ=255)

                                                                                               tACTGATCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTGATCACTGTCTCGGCCGTGAAGaaa                                                       <  1:229628/149‑1 (MQ=255)

                                                                                                aCTGATCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTGATCACTGTCTCGGCCGTGAAGAAAt                                                      >  7:263476/1‑149 (MQ=255)

                                                                                                 cTGATCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTGATCACTGTCTCGGCCGTGAAGAAAtt                                                     >  8:204866/1‑149 (MQ=255)

                                                                                                  tGATCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTGATCACTGTCTCGGCCGTGAAGAAATTc                                                    >  7:163853/1‑149 (MQ=255)

                                                                                                  tGATCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTGATAACTGTCTCGGCCGTGAAGAAATTc                                                    >  7:89190/1‑149 (MQ=255)

                                                                                                    aTCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGGCGACGTACGT‑GACGTCCAAGGGTCCGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTGATCACTGTCTCGGCCGTGAAGAAATTc                                                    <  7:224065/147‑1 (MQ=255)

                                                                                                     tCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTGATCACTGTCTCGGCCGTGAAGAAATTCgag                                                 <  2:200061/149‑1 (MQ=255)

                                                                                                     tCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTGATCACTGTCTCGGCCGTGAAGAAATTCgag                                                 >  2:224673/1‑149 (MQ=255)

                                                                                                     tCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTGATCACTGTCTCGGCCGTGAAGAAATTCgag                                                 <  8:263476/149‑1 (MQ=255)

                                                                                                     tCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTGATCACTGTCTCGGCCGTGAAGAAATTCga                                                  <  3:50278/148‑1 (MQ=255)

                                                                                                        tttCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTGATCACTGTCTCGGCCGTGAAGAAATTCgaggag                                              >  2:13720/1‑149 (MQ=255)

                                                                                                          tCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTGATCACTGTCTCGGCCGTGAAGAAATTCGAGGAgct                                            >  1:105379/1‑149 (MQ=255)

                                                                                                            cGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTGATCACTGTCTCGGCCGTGAAGAAATTCGAGGAgctgc                                          <  8:163853/149‑1 (MQ=255)

                                                                                                             gtcGCTTTTGATCAGTACCTTTACCTGGCTGCTCGTAACCTTCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGTGAAAGTGTTGATCACTGTCTCGGCCGTGAAGAAATTCGAGGAgctgct                                         <  1:153532/147‑1 (MQ=255)

                                                                                                               cGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTACGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTGATCACTGTCTCGGCCGTGAAGAAATTCGAGGAGCTGCTgg                                       >  2:215502/1‑149 (MQ=255)

                                                                                                                 cTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTGATCACTGTCTCGGCCGTGAAGAAATTCGAGGAGCTGCTGGGa                                     <  5:147599/149‑1 (MQ=255)

                                                                                                                  tGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTGATCACTGTCTCGGCCGTGAAGAAATTCGAGGAGCTGCTGGGAt                                    >  4:158819/1‑149 (MQ=255)

                                                                                                                    ttGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGTCGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTGATCACTGTCTCGGCCGTGAAGAAATTCGAGGAGCTGCTGGGATg                                   >  1:266570/1‑148 (MQ=255)

                                                                                                                    ttGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTGATCACTGTCTCGGCCGTGAAGAAATTCGAGGAGCTGCTGGGAt                                    <  5:359992/147‑1 (MQ=255)

                                                                                                                    ttGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTGATCACTGTCTCGGCCGTGAAGAAATTCGAGGAGCTGCTGGGAt                                    <  4:240015/147‑1 (MQ=255)

                                                                                                                    ttGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTGATCACTGTCTCGGCCGTGAAGAAATTCGAGGAGCTGCTGGGATg                                   >  3:107346/1‑148 (MQ=255)

                                                                                                                      gATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTGATCACTGTCTCGGCCGTGAAGAAATTCGAGGAGCTGCTGGGATGaa                                 >  5:45950/1‑148 (MQ=255)

                                                                                                                       aTCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTGATCACTGTCTCGGCCGTGAAGAAATTCGAGGAGCTGCTGGGATGAAc                                >  1:63715/1‑148 (MQ=255)

                                                                                                                       aTCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTGATCACTGTCTCGGCCGTGAAGAAATTCGAGGAGCTGCTGGGATGAAc                                <  3:158819/148‑1 (MQ=255)

                                                                                                                        tCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTGATCACTGTCTCGGCCGTGAAGAAATTCGAGGAGCTGCTGGGATGAAc                                >  1:231381/1‑147 (MQ=255)

                                                                                                                        tCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTGATCACTGTCTCGGCCGTGAAGAAATTCGAGGAGCTGCTGGGATGAACCa                              <  2:121181/149‑1 (MQ=255)

                                                                                                                        tCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTGATCACTGTCTCGGCCGTGAAGAAATTCGAGGAGCTGCTGGGATGAACCa                              <  2:266570/149‑1 (MQ=255)

                                                                                                                          aGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATGGCATACGAGAAAGTGTTGATCACTGTCTCGGCCGTGAAGAAAATCGAGGAGCTGCTGGGATGAACCAg                             >  7:274011/1‑148 (MQ=255)

                                                                                                                            aaCCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTGATCACTGTCTCGGCCGTGAAGAAATTCGAGGAGCTGCTGGGATGAACCAGGaa                          <  3:138032/149‑1 (MQ=255)

                                                                                                                            aaCCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTAATCACTGTCTCGGCCGTGAAGAAATTAGAGGAGATGCTGGGATGAACCAGGaa                          >  1:141274/1‑149 (MQ=255)

                                                                                                                               cTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTGATCACTGTCTCGGCCGTGAAGAAATTCGAGGAGCTGCTGGGATGAACCAGGAAcgc                       <  1:224673/149‑1 (MQ=255)

                                                                                                                                 gTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTGATCACTGTCTCGGCCGTGAAGAAATTCGAGGAGCTGCTGGGATGAACCAGGAAcgcg                      >  1:59845/1‑148 (MQ=255)

                                                                                                                                  tACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTGATCACTGTCTCGGCCGTGAAGAAATTCGAGGAGCTGCTGGGATGAACCAGGAACGCGTa                    <  2:220079/149‑1 (MQ=255)

                                                                                                                                   aCCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTGATCa                                                                           <  6:195700/93‑1 (MQ=255)

                                                                                                                                   aCCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTGATCa                                                                           >  5:195700/1‑93 (MQ=255)

                                                                                                                                      tGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAaggttccgagcagccaggtacaggttctgatcaacagcgtcggaaacgatcagtacatcgctcagacccatgccgttcagcttgttcagcagatctttggttttcg                <  6:356419‑M2/149‑107 (MQ=255)

                                                                                                                                       ggCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GAAGTCCAAGGTTACGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTGATCACTCTCTCGGCCCTCAAGTATTTCGAGGAGCTGCTGGGTTGAACCAGGAACGCGTATTCa                >  6:303659/1‑148 (MQ=255)

                                                                                                                                        gctgctCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTGATCACTGTCTCGGCCGTGAAGAAATTCGAGGAGCTGCTGGGATGAACCAGGAACGCGTATTCaaa              <  1:75404/149‑1 (MQ=255)

                                                                                                                                        gctgctCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTGATCACTGTCTCGGCCGTGAAGAAATTCGAGGAGCTGCTGGGATGAACCAGGAACGCGTATTCaa               <  4:107346/148‑1 (MQ=255)

                                                                                                                                             tCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAaggttacgagcagccaggtacaggttctgatcaacagcgtcggaaacgatcagtacatcgctcagacccatgccgttcagcttgttcagcagatctttggttttcggtgctt          <  4:3879‑M2/148‑113 (MQ=255)

                                                                                                                                               gTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAaggttacgagcagccaggtacaggttctgatcaacagcgtcggaaacgatcagtacatcgctcagacccatgccgttcagcttgttcagcagatctttggttttcggtgcttc         >  3:3879‑M2/1‑34 (MQ=255)

                                                                                                                                               gTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTGATCACTGTCTCGGCCGTGAAGAAATTCGAGGAGCTGCTGGGATGAACCAGGAACGCGTATTCAAAGtcctcc       <  2:105379/149‑1 (MQ=255)

                                                                                                                                               gTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTGATCACTGTCTCGGCCGTGAAGAAATTCGAGGAGCTGCTGGGATGAACCAGGAACGCGTATTCAAAGtcctcc       <  2:231381/149‑1 (MQ=255)

                                                                                                                                               gTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTGATCACTGTCTCGGCCGTGAAGAAATTCGAGGAGCTGCTGGGATGAACCAGGAACGCGTATTCAAAGtcctc        <  1:220127/148‑1 (MQ=255)

                                                                                                                                                 aaCCTtggacgtcacgtacgccgacgtgcggcaggttacgagcagccaggtacaggttctgatcaacagcgtcggaaacgatcagtacatcgctcagacccatgccgttcagcttgttcagcagatctttggttttcggtgcttcaaca      <  3:147218‑M1/149‑145 (MQ=255)

                                                                                                                                                 aaCCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTGATCACTGTCTCGGCCGTGAAGAAATTCGAGGAGCTGCTGGGATGAACCAGGAACGCGTATTCAAAGTCATCCtt     >  8:154136/1‑149 (MQ=255)

                                                                                                                                                   ccTtggacgtcacgtacgtcgacgtgcggcaggttacgagcagccaggtacaggttctgatcaacagcgtcggaaacgatcagtacatcgctcagacccatgccgttcagcttgttcagcagatctttggttttcggtgcttcaacagc    <  4:138032‑M1/149‑147 (MQ=255)

                                                                                                                                                   ccTGCCGCACGTCGACGTACGT‑GACGTCCAaggttacgagcagccaggtacaggttctgatcaacagcgtcggaaacgatcagtacatcgctcagacccatgccgttcagcttgttcagcagatctttggttttcggtgc            >  8:144274‑M2/1‑30 (MQ=255)

                                                                                                                                                   ccTGCCGCACGTCGACGTACGT‑GACGTCCAaggttacgagcagccaggtacaggttctgatcaacagcgtcggaaacgatcagtacatcgctcagacccatgccgttcagcttgttcagcagatctttggttttcggtgc            <  7:144274‑M2/140‑111 (MQ=255)

                                                                                                                                                    cTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTGATCACTGTCTCGGCCGTGAAGAAATTCGAGGAGCTGCTGGGATGAACCAGGAACGCGTATTCAAAGTCCTCCTTGGc  <  7:171945/149‑1 (MQ=255)

                                                                                                                                                    cTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTGATCACTGTCTCGGCCGTGAAGAAATTCGAGGAGCTGCTGGGATGAACCAGGAACGCGTATTCAAAGTCCTCCTTCGc  >  4:61160/1‑149 (MQ=255)

AGCGACCGTCTGGTCGTGGTTCAGGACTTCGCTGTTGAAGCACCGAAAACCAAAGA‑TCTGCTGAACAAGCTGAACGGCATGGGTCTGAGCGATGTACTGATCGTTTCCGACGCTGTTGATCAGAACCTGTACCTGGCTGCTCGTAACCTGCCGCACGTCGACGTACGT‑GACGTCCAAGGTTCCGACCCGGTCAGTCTGATCGCATACGAGAAAGTGTTGATCACTGTCTCGGCCGTGAAGAAATTCGAGGAGCTGCTGGGATGAACCAGGAACGCGTATTCAAAGTCCTCCTTGGC  >  NC_002947/552040‑552335

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.