New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 99901857 (0.950)3 (0.050) 3/254 NT 5.1% coding (1101/2292 nt) PP_0861 outer membrane ferric siderophore receptor
?NC_002947 = 999045 56 (0.970)coding (1074/2292 nt) PP_0861 outer membrane ferric siderophore receptor

GACCCGCCTGGCACGGTGTCGGTGTCGACGGTGTAGCTTGAGCGCTCGCTCTCTTCACGGCTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTCCTGCATGCTGTTGCCGTGACGCAGGGTGTTCTTGATGGTCAGCGAGTCGGTCAGGT  >  NC_002947/998872‑999163
                                                                                                                                                  |                                                                                                                                                 
gACCCGCCTGGCACGGTGTCTGTGTCGACGGTGTAGCTTGAGCGCTCGCTCTCTTCACGGCTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGgt                                                                                                                                                 <  3:344523/149‑1 (MQ=255)
gACCCGCCTGGCACGGTGTCGGTGTCGACGGTGTAGCTTGAGCGCTCGCTCTCTTCACGGCTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGgt                                                                                                                                                 <  1:205858/149‑1 (MQ=255)
gACCCGCCTGGCACGGTGTCGGTGTCGACGGTGTAGCTTGAGCGCTCGCTCTCTTCACGGCTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGgt                                                                                                                                                 <  7:18013/149‑1 (MQ=255)
gACCCGCCTGGCACGGTGTCGGTGTCGACGGTGTAGCTTGAGCGCTCGCTCTCTTCACGGCTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGgt                                                                                                                                                 <  7:101157/149‑1 (MQ=255)
 aCCCGCCTGGCACGGTGTCGGTGTCGACGGTGTAGCTTGAGCGCTCGCTCTCTTCACGGCTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGgtg                                                                                                                                                >  3:12214/1‑149 (MQ=255)
  ccgggcTGGCACGGTGTCGGTGTCGACGGTGTAGCTTGAGCGCTCGCTCTCTTCACGGCTCAGTTCGATAACGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGgtgt                                                                                                                                               >  4:243080/6‑149 (MQ=255)
   ccGCCTGGCACGGTGTCGGTGTCGACGGTGTAGCTTGAGCGCTCGCTCTCTTCACGGCTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGtt                                                                                                                                              <  7:146501/149‑1 (MQ=255)
     gCCTGGCACGGTGTCGGTGTCGACGGTGTAGCTTGAGCTCTCGATCTCTTCACGGCTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGACGAACAGATCGGTCTGGTTGGAGGTAGTGGCGGTGTTGc                                                                                                                                            >  5:301050/1‑149 (MQ=255)
     gCCTGGCACGGTGTCGGTGTCGACGGTGTAGCTTGAGCGCTCGCTCTCTTCACGGCTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGc                                                                                                                                            <  1:327047/149‑1 (MQ=255)
          gCACGGTGTCGGTGTCGACGGTGTAGCTTGAGCGCTCGCTCTCTTCACGGCTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGaca                                                                                                                                       >  1:25814/1‑149 (MQ=255)
             cggtgtcggggtCGACGGGCTAGCTTGAGCGCGCGCGCTCTTCACGGCGCAGTCCGATACCGGGCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGCTCGGTCTGCGTGGTGGTAGTGGCGGTGTTGCCGACACgg                                                                                                                                    <  5:379918/149‑1 (MQ=255)
                  tcggtgtcgACGGTGTAGCTTGAGCGCTCGCTCTCTTCACGGCTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGtt                                                                                                                               <  3:243080/149‑1 (MQ=255)
                    ggtgtcgACGGTGTAGCTTGAGCGCTCGCTCTCTTCACGGCTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGgt                                                                                                                                                 <  8:1222/129‑1 (MQ=255)
                    ggtgtcgACGGTGTAGCTTGAGCGCTCGCTCTCTTCACGGCTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGgt                                                                                                                                                 >  7:1222/1‑129 (MQ=255)
                    ggtgtcgACGGTGTAGCTTGAGCGCTCGCTCTCTTCACGGCTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTgg                                                                                                                             <  7:158213/149‑1 (MQ=255)
                     gtgtcgACGGTGTAGCTTGAGCGCTCGCTCTCTTCACGGCTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTggc                                                                                                                            <  7:334121/149‑1 (MQ=255)
                     gtgtcgACAGTGTAGCTTGAGCGCTCGCTCTCTTCACGGCTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGacac                                                                                                                                      <  8:144982/139‑1 (MQ=255)
                     gtgtcgACAGTGTAGCTTGAGCGCTCGCTCTCTTCACGGCTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGacac                                                                                                                                      >  7:144982/1‑139 (MQ=255)
                             ggTGTAGCTTGAGCGCTCGCTCTCTTCACGGCTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGcgcc                                                                                                                    >  4:220262‑M2/1‑145 (MQ=255)
                                gtAGCTTGAGCGCTCGCTCTCTTCACGGCTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGa                                                                                                                 <  2:25210/149‑1 (MQ=255)
                                 tAGCTTGAGCGCTCGCTCTCTTCACGGCTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGccgcgccaacacccgtgtcggcaacaccgccact                                                                                                                 <  1:376443‑M1/148‑35 (MQ=255)
                                 tAGCTTGAGCGCTCGCTCTCTTCACGGCTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGacac                                                                                                                                      <  7:4769/127‑1 (MQ=255)
                                 tAGCTTGAGCGCTCGCTCTCTTCACGGCTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGacac                                                                                                                                      >  8:4769/1‑127 (MQ=255)
                                    cTTGAGCGCTCGCTCTCTTCACGGCTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACt                                                                                                             >  7:259856/1‑149 (MQ=255)
                                            ctcgctcTCTTCACGGCTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCgttgt                                                                                                     >  3:164450/1‑149 (MQ=255)
                                            ctcgctcTCTTCACGGCTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCgttgt                                                                                                     <  1:219974/149‑1 (MQ=255)
                                             tcgctcTCTTCACGGCTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGccgcgccaacacccgtgtcggcaacaccgccac                                                                                                                  >  3:193267‑M1/1‑102 (MQ=255)
                                             tcgctcTCTTCACGGCTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGccgcgccaacacccgtgtcggcaacaccgccac                                                                                                                  <  4:193267‑M1/135‑34 (MQ=255)
                                             tcgctcTCTTCACGGCTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCgttgtt                                                                                                    >  6:246584/1‑149 (MQ=255)
                                               gctcTCTTCACGGCTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCgttgtt                                                                                                    <  6:5550/147‑1 (MQ=255)
                                               gctcTCTTCACGGCTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGa                                                                                                  <  2:25814/149‑1 (MQ=255)
                                                 tctctTCACGGCTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACg                                                                                                >  4:332019/1‑149 (MQ=255)
                                                   tctTCACGGCTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGtt                                                                                              >  3:234274/1‑149 (MQ=255)
                                                   tctTCACGGCTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGtt                                                                                              >  7:168644/1‑149 (MQ=255)
                                                       cACGGCTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTg                                                                                             <  4:234274/146‑1 (MQ=255)
                                                        aCGGCTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTgg                                                                                                                             >  8:152412/1‑113 (MQ=255)
                                                        aCGGCTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTgg                                                                                                                             <  7:152412/113‑1 (MQ=255)
                                                        aCGGCTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCt                                                                                         >  3:167383/1‑149 (MQ=255)
                                                        aCGGCTCAGTTCGATAACGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCTGCGCCAGACACTGCCGTTGTTGACGTTGACCt                                                                                         >  6:383414/1‑149 (MQ=255)
                                                          gtcTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTg                                                                                       <  2:53172/147‑1 (MQ=255)
                                                          ggCTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTg                                                                                       >  5:180638/1‑149 (MQ=255)
                                                             tCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTg                                                                                    >  5:92489/1‑149 (MQ=255)
                                                                 ttCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGc                                                                                                           <  3:357510/122‑1 (MQ=255)
                                                                 ttCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGc                                                                                                           >  4:357510/1‑122 (MQ=255)
                                                                       aCCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCt                                                                          >  3:373057/1‑149 (MQ=255)
                                                                         cGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTgg                                                                        <  8:314810/149‑1 (MQ=255)
                                                                           gTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGt                                                                      <  8:259856/149‑1 (MQ=255)
                                                                              gagaAGCTGTTTTTCATGCCGCCATCGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTg                                                                                    <  2:226943/132‑1 (MQ=255)
                                                                              gagaAGCTGTTTTTCATGCCGCCATCGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTg                                                                                    >  1:226943/1‑132 (MQ=255)
                                                                              gagaAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAg                                                                   <  8:168644/149‑1 (MQ=255)
                                                                                gaAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGGGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGa                                                                 <  8:22117/149‑1 (MQ=255)
                                                                                   gCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGCGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATg                                                               >  2:319548/1‑148 (MQ=255)
                                                                                        ttttCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTc                                                          <  4:373057/148‑1 (MQ=255)
                                                                                                          aaaaCTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTCCTGCATGCTGTTGCCGTGa                                       >  3:196395/1‑149 (MQ=255)
                                                                                                           aaaCTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTCCTGCATGCTGTTGCCGTGAc                                      <  6:180638/149‑1 (MQ=255)
                                                                                                             aCTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTCCTGCATGCTGTTGCCGTGACg                                     >  3:89007/1‑148 (MQ=255)
                                                                                                              cTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTCCTGCATGCTGTTGCCGTGACg                                     >  8:117641/1‑147 (MQ=255)
                                                                                                               tCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTCCTGCATGCTGTTGCCGTGACGCAg                                  >  7:266838/1‑149 (MQ=255)
                                                                                                                 gCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTCCTGCATGCTGTTGCCGTGACGCAgg                                 <  4:164450/148‑1 (MQ=255)
                                                                                                                   cGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTCCTGCATGCTGTTGCCGTGACGCAGGgtg                              <  6:92489/149‑1 (MQ=255)
                                                                                                                        aGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTCCTGCATGCTGTTGCCGTGACGCAGGGTGTTCtt                         >  1:157502/1‑149 (MQ=255)
                                                                                                                             ggTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTCCTGCATGCTGTTGCCGTGACGCAGGGTGTTCTTGATg                     <  5:246584/148‑1 (MQ=255)
                                                                                                                              gTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTCCTGCATGCTGTTGCCGTGACGCAGGGTGTTCTTGATGGt                   >  4:328980/1‑149 (MQ=255)
                                                                                                                                   gttggtGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTCCTGCATGCTGtt                                              >  7:319290/1‑117 (MQ=255)
                                                                                                                                   gttggtGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTCCTGCATGCTGtt                                              <  8:319290/117‑1 (MQ=255)
                                                                                                                                    ttggtGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTCCTGCATGCTGTTGCCGTGACGCAGGGTGTTCTTGATGGTCAGCGa             <  4:12214/149‑1 (MQ=255)
                                                                                                                                      ggtggtAGTTGCGGTGGTGCCGACACGGGTGTTGGCGCGTCGCCATACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTCCTGCATGCTGTTGCCGTGACGCAGGGTGTTCTTGATGGTCAGCGAg            <  2:215825/148‑1 (MQ=255)
                                                                                                                                      ggtggtAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACTCTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTCCTGCATGCTGTTGCCGTGACGCAGGGTGTTCTTGATGGTCAGCGAGt           >  5:74589/1‑149 (MQ=255)
                                                                                                                                       gtggtAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTCCTGCATGCTGTTGCCGTGACGCAGGGTGTTCTTGATGGTCAGCGAGt           <  3:328980/148‑1 (MQ=255)
                                                                                                                                       gtggtAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTCCTGCATGCTGTTGCCGTGACGCAGGGTGTTCTTGATGGTCAGCGAGTc          >  8:70509/1‑149 (MQ=255)
                                                                                                                                            aGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGcgccactaccaccaaccagaccgatctgttcggcgagttttacgttggcggcatgaaaaacagcttctcgaccggtatcgaactgagccgtgaagagagcgagcgctcaagcta      <  1:376443‑M2/148‑115 (MQ=255)
                                                                                                                                             gTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGcgccactaccaccaaccagaccgatctgttcggcgagttttacgttggcggcatgaaaaacagcttctcgaccggtatcgaactgagccgtgaagagagcga                  >  3:193267‑M2/1‑33 (MQ=255)
                                                                                                                                             gTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGcgccactaccaccaaccagaccgatctgttcggcgagttttacgttggcggcatgaaaaacagcttctcgaccggtatcgaactgagccgtgaagagagcga                  <  4:193267‑M2/135‑103 (MQ=255)
                                                                                                                                              tGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTCCTGCATGCTGTTGCCGTGACGCAGGGTGTTCTTGATGGTCAGCGAGTCGGTCAgg   >  1:44169/1‑149 (MQ=255)
                                                                                                                                               ggCGccgcgccaacacccgtgtcggcaacaccgccactaccaccaaccagaccgatctgttcggcgagttttacgttggcggcatgaaaaacagcttctcgaccggtatcgaactgagccgtgaagagagcgagcgctcaagctacacc  >  4:220262‑M1/1‑4 (MQ=255)
                                                                                                                                                  |                                                                                                                                                 
GACCCGCCTGGCACGGTGTCGGTGTCGACGGTGTAGCTTGAGCGCTCGCTCTCTTCACGGCTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTCCTGCATGCTGTTGCCGTGACGCAGGGTGTTCTTGATGGTCAGCGAGTCGGTCAGGT  >  NC_002947/998872‑999163

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.