New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 99901857 (0.950)3 (0.050) 3/254 NT 5.1% coding (1101/2292 nt) PP_0861 outer membrane ferric siderophore receptor
?NC_002947 = 999045 56 (0.970)coding (1074/2292 nt) PP_0861 outer membrane ferric siderophore receptor

GGTGTAGCTTGAGCGCTCGCTCTCTTCACGGCTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTCCTGCATGCTGTTGCCGTGACGCAGGGTGTTCTTGATGGTCAGCGAGTCGGTCAGGTCGTGCTCGACGGCGAAGGTTGCGATATCCA  >  NC_002947/998901‑999193
                                                                                                                                                |                                                                                                                                                    
ggTGTAGCTTGAGCGCTCGCTCTCTTCACGGCTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGcgcc                                                                                                                                                  >  4:220262‑M2/1‑145 (MQ=255)
   gtAGCTTGAGCGCTCGCTCTCTTCACGGCTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGa                                                                                                                                               <  2:25210/149‑1 (MQ=255)
       cTTGAGCGCTCGCTCTCTTCACGGCTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACt                                                                                                                                           >  7:259856/1‑149 (MQ=255)
               ctcgctcTCTTCACGGCTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCgttgt                                                                                                                                   <  1:219974/149‑1 (MQ=255)
               ctcgctcTCTTCACGGCTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCgttgt                                                                                                                                   >  3:164450/1‑149 (MQ=255)
                tcgctcTCTTCACGGCTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCgttgtt                                                                                                                                  >  6:246584/1‑149 (MQ=255)
                  gctcTCTTCACGGCTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCgttgtt                                                                                                                                  <  6:5550/147‑1 (MQ=255)
                  gctcTCTTCACGGCTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGa                                                                                                                                <  2:25814/149‑1 (MQ=255)
                    tctctTCACGGCTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACg                                                                                                                              >  4:332019/1‑149 (MQ=255)
                      tctTCACGGCTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGtt                                                                                                                            >  7:168644/1‑149 (MQ=255)
                      tctTCACGGCTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGtt                                                                                                                            >  3:234274/1‑149 (MQ=255)
                          cACGGCTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTg                                                                                                                           <  4:234274/146‑1 (MQ=255)
                           aCGGCTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCt                                                                                                                       >  3:167383/1‑149 (MQ=255)
                           aCGGCTCAGTTCGATAACGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCTGCGCCAGACACTGCCGTTGTTGACGTTGACCt                                                                                                                       >  6:383414/1‑149 (MQ=255)
                             gtcTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTg                                                                                                                     <  2:53172/147‑1 (MQ=255)
                             ggCTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTg                                                                                                                     >  5:180638/1‑149 (MQ=255)
                                tCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTg                                                                                                                  >  5:92489/1‑149 (MQ=255)
                                    ttCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGc                                                                                                                                         >  4:357510/1‑122 (MQ=255)
                                    ttCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGc                                                                                                                                         <  3:357510/122‑1 (MQ=255)
                                          aCCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCt                                                                                                        >  3:373057/1‑149 (MQ=255)
                                            cGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTgg                                                                                                      <  8:314810/149‑1 (MQ=255)
                                              gTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGt                                                                                                    <  8:259856/149‑1 (MQ=255)
                                                 gagaAGCTGTTTTTCATGCCGCCATCGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTg                                                                                                                  >  1:226943/1‑132 (MQ=255)
                                                 gagaAGCTGTTTTTCATGCCGCCATCGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTg                                                                                                                  <  2:226943/132‑1 (MQ=255)
                                                 gagaAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAg                                                                                                 <  8:168644/149‑1 (MQ=255)
                                                   gaAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGGGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGa                                                                                               <  8:22117/149‑1 (MQ=255)
                                                      gCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGCGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATg                                                                                             >  2:319548/1‑148 (MQ=255)
                                                           ttttCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTc                                                                                        <  4:373057/148‑1 (MQ=255)
                                                                             aaaaCTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTCCTGCATGCTGTTGCCGTGa                                                                     >  3:196395/1‑149 (MQ=255)
                                                                              aaaCTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTCCTGCATGCTGTTGCCGTGAc                                                                    <  6:180638/149‑1 (MQ=255)
                                                                                aCTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTCCTGCATGCTGTTGCCGTGACg                                                                   >  3:89007/1‑148 (MQ=255)
                                                                                 cTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTCCTGCATGCTGTTGCCGTGACg                                                                   >  8:117641/1‑147 (MQ=255)
                                                                                  tCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTCCTGCATGCTGTTGCCGTGACGCAg                                                                >  7:266838/1‑149 (MQ=255)
                                                                                    gCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTCCTGCATGCTGTTGCCGTGACGCAgg                                                               <  4:164450/148‑1 (MQ=255)
                                                                                      cGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTCCTGCATGCTGTTGCCGTGACGCAGGgtg                                                            <  6:92489/149‑1 (MQ=255)
                                                                                           aGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTCCTGCATGCTGTTGCCGTGACGCAGGGTGTTCtt                                                       >  1:157502/1‑149 (MQ=255)
                                                                                                ggTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTCCTGCATGCTGTTGCCGTGACGCAGGGTGTTCTTGATg                                                   <  5:246584/148‑1 (MQ=255)
                                                                                                 gTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTCCTGCATGCTGTTGCCGTGACGCAGGGTGTTCTTGATGGt                                                 >  4:328980/1‑149 (MQ=255)
                                                                                                      gttggtGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTCCTGCATGCTGtt                                                                            <  8:319290/117‑1 (MQ=255)
                                                                                                      gttggtGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTCCTGCATGCTGtt                                                                            >  7:319290/1‑117 (MQ=255)
                                                                                                       ttggtGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTCCTGCATGCTGTTGCCGTGACGCAGGGTGTTCTTGATGGTCAGCGa                                           <  4:12214/149‑1 (MQ=255)
                                                                                                         ggtggtAGTTGCGGTGGTGCCGACACGGGTGTTGGCGCGTCGCCATACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTCCTGCATGCTGTTGCCGTGACGCAGGGTGTTCTTGATGGTCAGCGAg                                          <  2:215825/148‑1 (MQ=255)
                                                                                                         ggtggtAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACTCTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTCCTGCATGCTGTTGCCGTGACGCAGGGTGTTCTTGATGGTCAGCGAGt                                         >  5:74589/1‑149 (MQ=255)
                                                                                                          gtggtAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTCCTGCATGCTGTTGCCGTGACGCAGGGTGTTCTTGATGGTCAGCGAGt                                         <  3:328980/148‑1 (MQ=255)
                                                                                                          gtggtAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTCCTGCATGCTGTTGCCGTGACGCAGGGTGTTCTTGATGGTCAGCGAGTc                                        >  8:70509/1‑149 (MQ=255)
                                                                                                               aGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGcgccactaccaccaaccagaccgatctgttcggcgagttttacgttggcggcatgaaaaacagcttctcgaccggtatcgaactgagccgtgaagagagcgagcgctcaagcta                                    <  1:376443‑M2/148‑115 (MQ=255)
                                                                                                                gTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGcgccactaccaccaaccagaccgatctgttcggcgagttttacgttggcggcatgaaaaacagcttctcgaccggtatcgaactgagccgtgaagagagcga                                                >  3:193267‑M2/1‑33 (MQ=255)
                                                                                                                gTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGcgccactaccaccaaccagaccgatctgttcggcgagttttacgttggcggcatgaaaaacagcttctcgaccggtatcgaactgagccgtgaagagagcga                                                <  4:193267‑M2/135‑103 (MQ=255)
                                                                                                                 tGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTCCTGCATGCTGTTGCCGTGACGCAGGGTGTTCTTGATGGTCAGCGAGTCGGTCAgg                                 >  1:44169/1‑149 (MQ=255)
                                                                                                                          tGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTCCTGCATGCTGTTGCCGTGACGCAGGGTGTTCTTGATGGTCAGCGAGTCGGTCAGGTCGTGCTc                         >  4:305068/1‑148 (MQ=255)
                                                                                                                           gCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTCCTGCATGCTGTTGCCGTGACGCAGGGTGTTCTTGATGGTCAGCGAGTCGGTCAGGTCGTGCTCGa                       >  5:283171/1‑149 (MQ=255)
                                                                                                                           gCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTCCTGCATGCTGTTGCCGTGACGCAGGGTGTTCTTGATGGTCAGCGAGTCGGTCAGGTCGTGCTCGa                       >  4:16316/1‑149 (MQ=255)
                                                                                                                            ccGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTCCTGCATGCTGTTGCCGTGACGCAGGGTGTTCTTGATGGTCAGCGAGTCGGTCAGGTCGTGCTCGAc                      <  4:124666/149‑1 (MQ=255)
                                                                                                                               acacGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTCCTGCATGCTGTTGCCGTGACGCAGGGTGTTCTTGATGGTCAGCGAGTCGGTCAGGTCGTGCTCGACGGc                   >  6:124756/1‑149 (MQ=255)
                                                                                                                                 acGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTCCTGCATGCTGTTGCCGTGACGCAGGGTGTTCTTGATGGTCAGCGAGTCGGTCAGGTCGTGCTCGACGGCg                  >  4:312729/1‑148 (MQ=255)
                                                                                                                                   gggTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTCCTGCATGCTGTTGCCGTGACGCAGGGTGTTCTTGATGGTCAGCGAGTCGGTCAGGTCGTGCTCGACGGCGAAg               >  4:159295/1‑149 (MQ=255)
                                                                                                                                   gggTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCGTGCTGTCGTCGGGCTGGGTCAGGATGTAGTCCTGCATGCTGTTGCCGTGACGCAGGGTGTTCTTGATGGTCAGCGAGTCGGTCAGGTCGTGCTCGACGGCGAAg               >  1:228737/1‑149 (MQ=255)
                                                                                                                                     gtgtTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTCCTGCATGCTGTTGCCGTGACGCAGGGTGTTCTTGATGGTCAGCGAGTCGGTCAGGTCGTGCTCGACGGCGAAGGt             <  4:196395/149‑1 (MQ=255)
                                                                                                                                      tgtTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTCCTGCATGCTGTTGCCGTGACGCAGGGTGTTCTTGATGGTCAGCGAGTCGGTCAGGTCGTGCTCGACGGCGAAGGtt            >  4:300093/1‑149 (MQ=255)
                                                                                                                                        ttGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTCCTGCATGCTGTTGCCGTGACGCAGGGTGTTCTTGATGGTCAGCGAGTCGGTCAGGTCGTGCTCGACGGCGAAGGTTGc          >  8:326016/1‑149 (MQ=255)
                                                                                                                                          ggcgcggcgcCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTCCTGCATGCTGTTGCCGTGACGCAGGGTGTTCTTGATGGTCAGCGAGTCGGTCAGGTCGTGCTCGACGGCGAAGGTTGCGa        <  4:89007/149‑1 (MQ=255)
                                                                                                                                                gcgcCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTCCTGCATGCTGTTGCCGTGACGCAGGgtg                                                            <  4:140680/91‑1 (MQ=255)
                                                                                                                                                gcgcCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTCCTGCATGCTGTTGCCGTGACGCAGGgtg                                                            >  3:140680/1‑91 (MQ=255)
                                                                                                                                                gcgcCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTCCTGCATGCTGTTGCCGTGACGCAGGGTGTTCTTGATGGTCAGCGAGTCGGTCTGGTCGTGCTCGACGGCGAAGGTTGCGATATCCa  <  3:59543/149‑1 (MQ=255)
                                                                                                                                                |                                                                                                                                                    
GGTGTAGCTTGAGCGCTCGCTCTCTTCACGGCTCAGTTCGATACCGGTCGAGAAGCTGTTTTTCATGCCGCCAACGTAAAACTCGCCGAACAGATCGGTCTGGTTGGTGGTAGTGGCGGTGTTGCCGACACGGGTGTTGGCGCGGCGCCAGACACTGCCGTTGTTGACGTTGCCCTTGCTGTCGTCGGGCTGGGTCAGGATGTAGTCCTGCATGCTGTTGCCGTGACGCAGGGTGTTCTTGATGGTCAGCGAGTCGGTCAGGTCGTGCTCGACGGCGAAGGTTGCGATATCCA  >  NC_002947/998901‑999193

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.