| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1311719 | 49 (0.810) | 4 (0.070) | 4/238 | NT | 7.8% | intergenic (‑187/+91) | PP_1144/rapA | membrane protein/RNA polymerase‑associated protein RapA |
| ? | NC_002947 | = 1311778 | 51 (0.940) | intergenic (‑246/+32) | PP_1144/rapA | membrane protein/RNA polymerase‑associated protein RapA | |||||
CAACCCTGTGCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAG > NC_002947/1311571‑1311863 | cAACCCTGTGCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGGGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGC < 2:146453‑M1/149‑1 (MQ=255) acatgtgCAGACTGTCCAGAGGCAGTATAGGAATGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAg < 4:237163/146‑1 (MQ=255) gACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCATTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGCAg > 8:317859/1‑149 (MQ=255) tCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATc < 6:236900/148‑1 (MQ=255) tCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCACGCGCACCAtac > 2:143927/1‑147 (MQ=255) ccAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCAtac > 7:15864/1‑146 (MQ=255) cgaaatcgacgccctgcgcaagcggcgcgaagatggcctggcaatgctggagaaggccgccctgcgcctggaagccattcgcgtgctggtggctggctagcgcaggccccgcgcccctTGTGGGAGCGGGCGAGCCCGCGAAGCATCCa < 5:144480‑M1/31‑1 (MQ=255) agagGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCAt > 5:199070/1‑144 (MQ=255) agagGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCAt < 6:199070/144‑1 (MQ=255) ggCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCacgcccgcgaacaccggcaaagc > 8:210249‑M1/1‑126 (MQ=255) ataGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGa < 2:375499/148‑1 (MQ=255) ataGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGAt > 4:224399/1‑149 (MQ=255) ataGGAAGGACTCCTTAACCCAACCTGACTAATGCCACAATGATTTCTACGATTTGGTAATAACTCCAATCGCACTCATGAATAAATTTGGGG‑CCCTATTTCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGa < 5:163404/148‑1 (MQ=255) cctgcgcaagcggcgcgaagatggcctggcaatgctggagaaggccgccctgcgcctggaagccattcgcgtgctggtggctggctagcgcaggccccgcgcccctTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATg < 2:273122‑M1/43‑1 (MQ=255) gaaggaGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCa < 6:323220/149‑1 (MQ=255) gaaggaGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGC > 8:210129‑M1/1‑116 (MQ=255) gaaggaGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGC < 7:204603‑M1/116‑1 (MQ=255) gaaggaGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGC > 8:204603‑M1/1‑116 (MQ=255) gaaggaGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGC < 7:210129‑M1/116‑1 (MQ=255) aGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGTAGCGGGCGAGACCGCGAAGCATCCCC‑TGCGGTGGATGCCAACGGc > 3:265057/1‑149 (MQ=255) cTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTg > 2:63180/1‑149 (MQ=255) cTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTg < 8:293136/149‑1 (MQ=255) cTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTg > 8:291531/1‑149 (MQ=255) ttAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGc > 2:277470/1‑149 (MQ=255) ttAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑AGCGGTGGATGCCACCGGGTTTGc > 2:43299/1‑149 (MQ=255) gcgaagatggcctggcaatgctggagaaggccgccctgcgcctggaagccattcgcgtgctggtggctggctagcgcaggccccgcgcccctTGTGGGAGCGGGCGAGCCCGCGAAGCAACCAC‑GGCGGTGGATGCCACCGGCGttggc < 6:354782‑M1/57‑3 (MQ=255) gCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGCAGCATCCAC‑TGCGGTGGTTGGCACCCGCGTTGGCGgt > 3:222102/1‑149 (MQ=39) ccTGACTAATGGCTCAATTATTTCTACGTTTTGGTTATAACTCCTATCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTc < 6:233717/148‑1 (MQ=255) gACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGCAGCAACCAC‑AGGGGGGGGTGGCACCCGggttggcggggttggcgg > 4:137466/1‑149 (MQ=255) gACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTAGCgg > 3:318729/1‑149 (MQ=255) gACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATACAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTAGCgg > 6:126417/1‑149 (MQ=255) aCTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCgg < 3:69991/148‑1 (MQ=255) aCTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCgg < 2:97606/148‑1 (MQ=255) aCTAATGCCACAATGATTTCTACTATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGC‑CCCTATTGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCgg < 7:317859/148‑1 (MQ=255) gcaatgctggagaaggccgccctgcgcctggaagccattcgcgtgctggtggctggctagcgcaggccctaatgccttccTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTcgcg > 2:116407‑M1/81‑147 (MQ=255) atgctggagaaggccgccctgcgcctggaagccattcgcgtgctggtggctggctagcgcaggccccgcgcccctTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGc > 5:354782‑M1/76‑149 (MQ=255) aaTGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCAACCGGCTTTGCCGGTGTTCGCGGGCGTgcccgct < 1:99507‑M2/149‑8 (MQ=255) aaTGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTgcccgctc > 1:63180‑M2/1‑141 (MQ=255) gagaaggccgccctgcgcctggaagccattcgcgtgctgggggcgggctagcgcaggccccgcgcccctTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACCTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCt > 1:273122‑M1/70‑149 (MQ=255) gaaggccgccctgcgcctggaagccattcgcgtgctggtggctggctagcgcaggccccgcgcccctTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTccc > 6:144480‑M1/68‑149 (MQ=255) aaggccgccctgcgcctggaagccattcgcgtgctggtggctggctagcgcaggccccgcgcccctTGTGGGAGCGGGCACGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTcg > 4:26394‑M1/67‑131 (MQ=255) aTTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCacgcccgcgaacaccggcaaagccggtggcatccaccgcagtggatgcttcgcgggctcgcccgctccca < 7:210249‑M1/148‑71 (MQ=255) cTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCCCCAAGCAAAAAC‑AGCGGTGGAATCCACCCGCATTTGCGGTTTTACAGGGCGTGCCCCCACACACaaag > 8:145804/1‑147 (MQ=255) cTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGGGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAg < 4:34251/148‑1 (MQ=255) tACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCCCCAAGCAAACAC‑TGCGGTGGGTGCCACCCGCGTTTCCGGTGTTTGCGGGCGTggccgcacccccaaagg < 7:45528‑M2/149‑18 (MQ=255) gTTATATCTCCAATCGCTGTGAGGAATAAATTTGGGG‑CCCTAAGGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGc < 1:267048/149‑1 (MQ=255) aaaaCTCCAAGCCCAGTGAGCAATAAATTGGGGG‑CCCTACTCCCTTCCTGGGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTg < 3:137466/147‑1 (MQ=25) taACTCCAATCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTgc < 1:143927/149‑1 (MQ=255) tCCAATCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCCAAGCATACAC‑TGCGGTGGATTCCACCGGCTTTGACGGTGTTAGAGGGCGTTCCCCCTCACCCAAAGGGCGCGGGGGCTGCGCTa > 4:48971/1‑149 (MQ=255) tCCAATCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCCCCCACCAAACAC‑AGCGGGGGGTTCCCCCCGCGTGTCCGGGGTGTGCGGGGGTGGCCGCCCCCCCCAAGGGGGCgggggccggcc > 5:313343/1‑140 (MQ=255) cAATCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATGCAC‑TTCGGTGGATTCCACCCCGTTTGCCGGTGTTAGCGGGCGTGCCCCCACCCCCAACGGGCGCGGGGCCTGCCCTagc > 5:116804/1‑149 (MQ=255) cAAGCGCCGTGACGAATAAATTTGGGG‑CCCTAATGCCTTCCTGGGGGCGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTagc < 7:145804/149‑1 (MQ=37) aaTCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTagcc < 3:224399/149‑1 (MQ=255) aaTCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCCCCCACCAAACAC‑AGCGGGGGGTGCCACCCGCATTTCCCGTGATAGAGGGGGTGCCCCCAACCCCAAACGGCGCGGGGCCAGCGCTagc > 8:316420/1‑148 (MQ=255) aTCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTagcca < 7:291531/149‑1 (MQ=255) aTCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTagcca < 4:318729/149‑1 (MQ=255) tCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGCAACAACCCC‑GGGGGGGGATGCCCCCCGCGTTGCCGGTGTTCGCGGGCGTGGCCCCGCCCCCCAGGGGGGCGGGGCCGGGGCGagcccg > 8:316134/1‑147 (MQ=255) cggCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTagcca < 5:145069/146‑1 (MQ=255) gCAGTGAGGAATAAATTTGGGG‑GCTTAATGCCTTCCTGTGGGAGCGGGCTAGCCCGCGAAGCATCCAG‑TGCGGTGGATGCCACGGGCTTTGTCGGTGTTCGGGGTCGTGGCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTagccagc < 6:116804/148‑1 (MQ=255) cAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCacgcccgcgaacaccggcaaagccggtggcatccaccgcagtggatgcttcgcgggctc < 2:228702‑M1/107‑60 (MQ=255) cAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCacgcccgcgaacaccggcaaagccggtggcatccaccgcagtggatgcttcgcgggctc > 1:228702‑M1/1‑48 (MQ=255) cAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCg < 2:274926/93‑1 (MQ=255) cAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCg > 1:274926/1‑93 (MQ=255) cAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCCCCAAACAAACAC‑TGCCGTGGATTCCACCCGCTTTTCCCGTTTTAGCCGGCGTGCCCCCAACCACAAAGGGCCCCGGGCCAGCGCAagccaaag > 6:145069/1‑145 (MQ=255) gAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCAc > 1:83429/1‑149 (MQ=255) gAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCGTTGCCGGTGTTAGCGGGCGGTCCCGCTCCCACAAGGGGCGCGGGGCCAGCGCTAGCCAGCCACCAGccc > 7:271065/1‑147 (MQ=38) g‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTcc < 1:162447/149‑1 (MQ=255) ctactgccccccTGCGCGCGCGCGCGAGCCCGCGAAGCAGCCCC‑TGCCGCGGAGGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAgg > 8:271065‑M1/13‑149 (MQ=255) ccTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAgg < 1:277470/149‑1 (MQ=255) cctttgggggtgcggccacgcccgcaaacaccggaaacgcgggtggcacccaccgcagtgtttgcttggggggctcgcccgctcccacaggaaggcattagggccccaaatttattcctcactgcgattggagttataaccaaatcgta < 7:45528‑M1/142‑133 (MQ=255) cTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAG‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGggcggc < 3:98213/149‑1 (MQ=255) cTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGggcggc < 4:222102/149‑1 (MQ=255) TGTGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGcc > 8:45528‑M1/1‑149 (MQ=255) tgGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTgcccgctcccacaggaaggcattagggccccaaatttattcctcactgcgattggagttataaccaaatcgtagaaat < 7:210249‑M2/148‑79 (MQ=255) gAGCGGGCacgcccgcgaacaccggcaaagccggtggcatccaccgcagtggatgcttcgcgggctcgcccgctcccacaggaaggcattagggccccaaatttattcctcactgcgattggagttataaccaaatcgtagaaatcatt > 1:63180‑M1/1‑8 (MQ=255) GAGCGGGCGTGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTtctc > 6:313343‑M1/1‑149 (MQ=255) aGCGGGCacgcccgcgaacaccggcaaagccggttgcatccaccgcagtggatgcttcgcgggctcgcccgctcccacaggaaggcattagggcccccaaatttattcctcactgcgattggagttataaccaaatcgtagaaatcatt < 1:99507‑M1/149‑143 (MQ=255) GCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCa > 2:83429‑M1/1‑149 (MQ=255) GGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAg < 3:91583‑M1/148‑1 (MQ=255) GCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGc > 6:5584‑M1/1‑45 (MQ=255) GCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGc < 5:5584‑M1/45‑1 (MQ=255) | CAACCCTGTGCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAG > NC_002947/1311571‑1311863 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |