| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1311719 | 49 (0.810) | 4 (0.070) | 4/238 | NT | 7.8% | intergenic (‑187/+91) | PP_1144/rapA | membrane protein/RNA polymerase‑associated protein RapA |
| ? | NC_002947 | = 1311778 | 51 (0.940) | intergenic (‑246/+32) | PP_1144/rapA | membrane protein/RNA polymerase‑associated protein RapA | |||||
GGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTCGATTTCGCTGTCACGCACACTTGG > NC_002947/1311633‑1311926 | atgctggagaaggccgccctgcgcctggaagccattcgcgtgctggtggctggctagcgcaggccccgcgcccctTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGc > 5:354782‑M1/76‑149 (MQ=255) aaTGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCAACCGGCTTTGCCGGTGTTCGCGGGCGTgcccgct < 1:99507‑M2/149‑8 (MQ=255) aaTGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTgcccgctc > 1:63180‑M2/1‑141 (MQ=255) gagaaggccgccctgcgcctggaagccattcgcgtgctgggggcgggctagcgcaggccccgcgcccctTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACCTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCt > 1:273122‑M1/70‑149 (MQ=255) gaaggccgccctgcgcctggaagccattcgcgtgctggtggctggctagcgcaggccccgcgcccctTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTccc > 6:144480‑M1/68‑149 (MQ=255) cTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCCCCAAGCAAAAAC‑AGCGGTGGAATCCACCCGCATTTGCGGTTTTACAGGGCGTGCCCCCACACACaaag > 8:145804/1‑147 (MQ=255) cTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGGGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAg < 4:34251/148‑1 (MQ=255) tACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCCCCAAGCAAACAC‑TGCGGTGGGTGCCACCCGCGTTTCCGGTGTTTGCGGGCGTggccgcacccccaaagg < 7:45528‑M2/149‑18 (MQ=255) gTTATATCTCCAATCGCTGTGAGGAATAAATTTGGGG‑CCCTAAGGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGc < 1:267048/149‑1 (MQ=255) aaaaCTCCAAGCCCAGTGAGCAATAAATTGGGGG‑CCCTACTCCCTTCCTGGGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTg < 3:137466/147‑1 (MQ=25) taACTCCAATCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTgc < 1:143927/149‑1 (MQ=255) tCCAATCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCCAAGCATACAC‑TGCGGTGGATTCCACCGGCTTTGACGGTGTTAGAGGGCGTTCCCCCTCACCCAAAGGGCGCGGGGGCTGCGCTa > 4:48971/1‑149 (MQ=255) tCCAATCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCCCCCACCAAACAC‑AGCGGGGGGTTCCCCCCGCGTGTCCGGGGTGTGCGGGGGTGGCCGCCCCCCCCAAGGGGGCgggggccggcc > 5:313343/1‑140 (MQ=255) cAATCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATGCAC‑TTCGGTGGATTCCACCCCGTTTGCCGGTGTTAGCGGGCGTGCCCCCACCCCCAACGGGCGCGGGGCCTGCCCTagc > 5:116804/1‑149 (MQ=255) cAAGCGCCGTGACGAATAAATTTGGGG‑CCCTAATGCCTTCCTGGGGGCGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTagc < 7:145804/149‑1 (MQ=37) aaTCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTagcc < 3:224399/149‑1 (MQ=255) aaTCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCCCCCACCAAACAC‑AGCGGGGGGTGCCACCCGCATTTCCCGTGATAGAGGGGGTGCCCCCAACCCCAAACGGCGCGGGGCCAGCGCTagc > 8:316420/1‑148 (MQ=255) aTCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTagcca < 4:318729/149‑1 (MQ=255) aTCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTagcca < 7:291531/149‑1 (MQ=255) tCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGCAACAACCCC‑GGGGGGGGATGCCCCCCGCGTTGCCGGTGTTCGCGGGCGTGGCCCCGCCCCCCAGGGGGGCGGGGCCGGGGCGagcccg > 8:316134/1‑147 (MQ=255) cggCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTagcca < 5:145069/146‑1 (MQ=255) gCAGTGAGGAATAAATTTGGGG‑GCTTAATGCCTTCCTGTGGGAGCGGGCTAGCCCGCGAAGCATCCAG‑TGCGGTGGATGCCACGGGCTTTGTCGGTGTTCGGGGTCGTGGCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTagccagc < 6:116804/148‑1 (MQ=255) cAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCCCCAAACAAACAC‑TGCCGTGGATTCCACCCGCTTTTCCCGTTTTAGCCGGCGTGCCCCCAACCACAAAGGGCCCCGGGCCAGCGCAagccaaag > 6:145069/1‑145 (MQ=255) gAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCAc > 1:83429/1‑149 (MQ=255) gAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCGTTGCCGGTGTTAGCGGGCGGTCCCGCTCCCACAAGGGGCGCGGGGCCAGCGCTAGCCAGCCACCAGccc > 7:271065/1‑147 (MQ=38) g‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTcc < 1:162447/149‑1 (MQ=255) ctactgccccccTGCGCGCGCGCGCGAGCCCGCGAAGCAGCCCC‑TGCCGCGGAGGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAgg > 8:271065‑M1/13‑149 (MQ=255) ccTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAgg < 1:277470/149‑1 (MQ=255) cTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAG‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGggcggc < 3:98213/149‑1 (MQ=255) cTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGggcggc < 4:222102/149‑1 (MQ=255) TGTGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGcc > 8:45528‑M1/1‑149 (MQ=255) tgGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTgcccgctcccacaggaaggcattagggccccaaatttattcctcactgcgattggagttataaccaaatcgtagaaat < 7:210249‑M2/148‑79 (MQ=255) GAGCGGGCGTGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑tctc > 6:313343‑M1/1‑149 (MQ=255) GCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCa > 2:83429‑M1/1‑149 (MQ=255) GGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAg < 3:91583‑M1/148‑1 (MQ=255) gAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTgcccgctcccacaggaaggcattagggccccaaatttattcctcactg > 1:228702‑M2/1‑59 (MQ=255) gAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTgcccgctcccacaggaaggcattagggccccaaatttattcctcactg < 2:228702‑M2/107‑49 (MQ=255) cccGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCCCGACCACAAGGGGCGCGGGGCCTGCGCGAGCCCCCCCCCACCACGCGAATGGCTTACAGGCGCAGGGCGGCCT‑TATCCCGCATTGCCa > 6:255497/1‑149 (MQ=37) ccGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAg < 3:48971/149‑1 (MQ=255) cgcgAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAgg > 1:208824/1‑149 (MQ=255) gcgAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTagccag > 8:301540/1‑92 (MQ=255) gcgAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTagccag < 7:301540/92‑1 (MQ=255) gcgAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGc > 2:288748/1‑149 (MQ=255) ccAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGcc < 4:230275/141‑1 (MQ=255) ccAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGcc > 3:230275/1‑141 (MQ=255) ccAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTcgc > 7:130506/1‑149 (MQ=255) ccAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTcgc > 1:374709/1‑149 (MQ=255) cAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTcgc < 2:99507/148‑1 (MQ=255) ggTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTCGCGCCGCtt < 4:91583/149‑1 (MQ=255) gTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTCACGCCGCTTg > 6:338555/1‑149 (MQ=255) cgaacACCGGCAAAGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTgcg > 5:339605/5‑147 (MQ=255) tGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGCATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGGCAGGCCAGCTTCGCGCCGCTTGCGCAg > 7:63895/1‑149 (MQ=255) ccACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAgg < 8:130506/148‑1 (MQ=255) cACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTCGcgccgc < 4:359640/138‑1 (MQ=255) cACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTCGcgccgc > 3:359640/1‑138 (MQ=255) cACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGc < 3:194022/149‑1 (MQ=255) cACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGc > 7:201662/1‑149 (MQ=255) cACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGc > 2:260637/1‑149 (MQ=255) aCCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCCCAAGGGGCGCGGGGCCGGCGCTAGCCAGCCACCCGCACGCGAATGGCTTCCAGGCGCCGGGCGGCCG‑TCTCCCGCATTTCCAGGCCCTCTTCGCGCCGCTTGCGCAGGGCg > 8:125378/1‑149 (MQ=255) cGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTc > 4:240884/1‑149 (MQ=255) gCTTTGCCGGTGTTCGCGGGCGTgcccgctcccacaggaaggcattagggccccaaatttattcctcactgcgattggagttataaccaaatcgtagaaatcattgtgccattagtcaggaaggcttaagtactccttcctatactgcc > 8:210249‑M2/1‑23 (MQ=255) gCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTCGATTTc < 5:126417/148‑1 (MQ=255) gCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTCGATTTc < 3:235591/148‑1 (MQ=255) cGGTGTTCGCGGGCGTGCCCGCTCCCCCAAGGGGCGCGGGGCCTGCGCTAGCCAGCCCCCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCG‑TCTCCAGCATTGCCAGGCCATCTTCGCGCCGCATGCGCAGGGCGTCGATTTAGCt > 6:239682/1‑149 (MQ=255) cGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTCACTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTCGATTTCGc < 1:288748/149‑1 (MQ=255) gtgtTCGCGGGCGTGCCCGCAACCACAAGGGGCGCGGGGCCAGCGCTAGCCAGCCACCAGCACGCGAATGGCATCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTCGCGCCCCATGCGCAGGGCGTCGAATTCGCtt > 8:124221/1‑147 (MQ=255) ttCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTCGATTTAGCTGTCAc > 1:380725/1‑149 (MQ=255) gggCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTCGATTTCGCTGTCACGcaca > 5:4875/1‑149 (MQ=255) gCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTCGATTTCGCTGTCACGCACACt > 8:216594/1‑149 (MQ=255) tGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTCGATTTCGCTGTCACGCACACTTgg < 2:374709/149‑1 (MQ=255) | GGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGG‑CCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAC‑TGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTCGATTTCGCTGTCACGCACACTTGG > NC_002947/1311633‑1311926 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |