New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2054905 =	59 (0.980)	5 (0.090)	5/252	NT	8.1%	coding (46/1092 nt)	aroC	chorismate synthase
	?	NC_002947	2054977 =	57 (0.990)					coding (118/1092 nt)	aroC	chorismate synthase

CGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTGGAAATTTCCCTCGCCGACCTGCAGCACGACCTTGACCGGCGCAAGCCCGGCACCAGCCGGCACACCACCCAGCGCCAGGAAGCCGACGAG  >  NC_002947/2054759‑2055051                                                                                                                                                   |                                                                                                                                                        gtattgcggatcagcaggccgatcgagcagccggtggtgcggccttcgaacacgccggaaaggatttccacctcgtcggcttcctggcgctgggtggtgtgccggctggtgccgggcttgcgccggtcaaggtcgtgctgcaggtcGGc                                                                                                                                                       <  4:261672‑M1/3‑1 (MQ=255) cGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGc                                                                                                                                                       >  3:142297/1‑149 (MQ=255) cGTGTAGGAGAGGGTTTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTAAACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCAATCTCCCGCAATACCTACGGTAAGCTGTTCACTGTCACCACCGCTGGc                                                                                                                                                       >  4:285081/1‑149 (MQ=38)  tattgcggatcagcaggccgatcgagcagccggtggtgcggccttcgaacacgccggaaaggatttccacctcgtcggcttcctggcgctgggtggtgtgccggctggtgccgggcttgcgccggtcaaggtcgtgctgcaggtcGGCg                                                                                                                                                      >  5:359402‑M1/146‑149 (MQ=255)   tgtAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCga                                                                                                                                                     <  4:221574/149‑1 (MQ=255)    gtAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGc                                                                                                                                                       >  8:196162/1‑146 (MQ=255)        gAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGc                                                                                                                                                 >  4:42366/1‑148 (MQ=255)         aGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCa                                                                                                                                               >  4:38407/1‑149 (MQ=255)              gTTTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCAT‑‑‑‑‑GGcc                                                                                                                                     <  4:357477/149‑1 (MQ=255)                  aCCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGc                                                                                                                                 >  6:47916/1‑149 (MQ=255)                    ccGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGt                                                                                                                               >  7:338564/1‑149 (MQ=255)                     cgcgAAGAGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGtt                                                                                                                              <  1:59286/149‑1 (MQ=255)                         aaGAGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTc                                                                                                                          >  1:314881/1‑149 (MQ=255)                          agcagccggtggtgcggccttcgaacacgccggaaaggatttccacctcgtcggcttcctggcgctgggtggtgtgccggctggtgccgggcttgcgccggtcaaggtcgtgctgcaggtcGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCg                                                                                                                         <  4:28583‑M1/28‑1 (MQ=255)                             ggCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCa                                                                                                                      <  1:221084/149‑1 (MQ=255)                             ggCCAGCACAGGCCACCCAACCATCTGTATACTGCAGCTTTCGTCCATTTCAGGCAGAACACGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCa                                                                                                                      >  7:172189/1‑149 (MQ=255)                                cAGCACAGGCCACCCATTCATCTGTATTCTGCTGCTTTCTTCCATTTCAGGCAGAACTCGCGGAGCGTCATTGTCCGGGAATTCCTTCGGCAAGCTGTTCACTGTCAGCACCGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATTg                                                                                                                   <  8:172189/149‑1 (MQ=255)                                 aGCACAGGCCACCCAACCCTCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAACGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGGCGCCATTGt                                                                                                                  <  7:308545/149‑1 (MQ=255)                                    acaGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATTGTCga                                                                                                               <  7:196162/149‑1 (MQ=255)                                             ccAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATTGTCGATGGATGccc                                                                                                      >  4:129523/1‑149 (MQ=255)                                             ccAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATTGTCGATGGATGcc                                                                                                       >  5:184015/1‑148 (MQ=255)                                                      tGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATCGTCGATGGATGCCCACCGGGCCt                                                                                             >  2:217976/1‑149 (MQ=255)                                                       gTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTg                                                                                            >  3:337973/1‑149 (MQ=255)                                                        tataCTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTg                                                                                            >  2:212688/1‑148 (MQ=255)                                                           aCTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTGGaaa                                                                                        >  2:178808/1‑149 (MQ=255)                                                            ctgctgCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTGGaaa                                                                                        <  2:54599/148‑1 (MQ=255)                                                            aaggatttccacctcgtcggcttcctggcgctgggtggtgtgccggctggtgccgggcttgcgccggtcaaggtcgtgctgcaggtcGGCGAGGGAAATTTCCAGGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTg                                                                                            >  3:5989‑M1/88‑149 (MQ=255)                                                             tgctgcTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTGGAAAtt                                                                                      >  2:281208/1‑149 (MQ=255)                                                             tgctgcTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCCAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATTGTCgat                                                                                                              <  2:364758/125‑1 (MQ=255)                                                             tgctgcTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCCAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATTGTCgat                                                                                                              >  1:364758/1‑125 (MQ=255)                                                               ctgctTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTGGAAAttt                                                                                     <  3:38407/148‑1 (MQ=255)                                                               ctgctTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTGGAAATTTc                                                                                    >  4:181673/1‑149 (MQ=255)                                                                 tttccacctcgtcggcttcctggcgctgggtggtgtgccggctggtgccgggcttgcgccggtcaaggtcgtgctgcaggtcGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTGGAAATTTccc                                                                                  <  4:196819‑M1/67‑1 (MQ=255)                                                                  ctTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATTGTCgat                                                                                                              >  8:93180/1‑120 (MQ=255)                                                                  ctTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATTGTCgat                                                                                                              <  7:93180/120‑1 (MQ=255)                                                                  ctTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTGGAAATTTccc                                                                                  <  2:314881/148‑1 (MQ=255)                                                                  ctTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTGGAAATTTcc                                                                                   <  6:184015/147‑1 (MQ=255)                                                                   tttCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTGGAAATTTCCCTc                                                                                >  4:104528/1‑149 (MQ=255)                                                                     cacctcgtcggcttcctggcgctgggtggtgtgccggctggtgccgggcttgcgccggtcaaggtcgtgctgcaggtcGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTGGAAATTTCCCTCGc                                                                              >  3:196819‑M1/79‑149 (MQ=255)                                                                       gTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTGGAAATTTCCCTCGCCg                                                                            >  8:89345/1‑149 (MQ=255)                                                                        tCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTGGAAATTTCCCTCGCCGa                                                                           >  4:171650/1‑149 (MQ=255)                                                                        ctcgtcggcttcctggcgctgggtggtgtgccggctggtgccgggcttgcgccggtcaaggtcgtgctgcaggtcGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTGGAAATTTCCCTCGCCGa                                                                           >  3:28583‑M1/76‑149 (MQ=255)                                                                          cATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTGGAAATTTCCCTCGCCGAc                                                                          <  5:47916/148‑1 (MQ=255)                                                                               cAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTGGAAATTTCCCTCGCCGACCTgca                                                                     <  1:281208/148‑1 (MQ=255)                                                                                  gCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGc                                                                                                                                                       >  6:183393/1‑68 (MQ=255)                                                                                  gCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGc                                                                                                                                                       <  5:183393/68‑1 (MQ=255)                                                                                   cAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTGGAAATTTCCCTCGCCGACCTGCAGCAc                                                                 >  5:171899/1‑148 (MQ=255)                                                                                     gAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTGGAAATTTCCCTCGCCGACCTGCAGCACGAc                                                              <  8:338564/149‑1 (MQ=255)                                                                                      aaCTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTGGAAATTTCCCTCGCCGACCTGCAGCACGAcc                                                             <  7:89345/149‑1 (MQ=255)                                                                                        cTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTGGAAATTTCCCTCGCCGACCTGCAGCACGACCtt                                                           <  3:181673/149‑1 (MQ=255)                                                                                        cTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTGGAAATTTCCCTCGCCGACCTGCAGCACGACCtt                                                           <  2:77973/149‑1 (MQ=255)                                                                                         tCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTGGAAATTTCCCTCGCCGACCTGCAGCACGACCtt                                                           >  2:211060/1‑148 (MQ=255)                                                                                             ggAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTGGAAATTTCCCTCGCCGACCTGCAGCACGACCTTGACCg                                                      >  1:213051/1‑149 (MQ=255)                                                                                                 cGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTGGAAATTTCCCTCGCCGACCTGCAGCACGACCTTGACCGgcac                                                  <  3:42366/149‑3 (MQ=255)                                                                                                          ccGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGCCCTGGAAATTTCCCTCGCCGACCTGCAGCACGACCTTGACCGGCGCAAGCCCGGc                                         >  7:267513/1‑149 (MQ=255)                                                                                                                   ccTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTGGAAATTTCCCTCGCCGACCTGCAGCACGACCTTGACCGGCGCAAGCCCGGCACCAGCCgg                                <  1:178808/149‑1 (MQ=255)                                                                                                                    cTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTGGAAATTTCCCTCGCCGACCTGCAGCACGACCTTGACCGGCGCAAGCCCGGCACCAGCCgg                                >  5:344689/1‑148 (MQ=255)                                                                                                                     tACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTGGAAATTTCCCTCGCCGACCTGCAGCACGACCTTGACCGGCGCAAGCCCGGCACCAGCCGGc                               >  6:364141/1‑148 (MQ=255)                                                                                                                       cGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTGGAAATTTCCCTCGCCGACCTGCAGCACGACCTTGACCGGCGCAAGCCCGGCACCAGCCGGcaca                            <  4:142297/149‑1 (MQ=255)                                                                                                                       cGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTGGAAATTTCCCTCGCCGACCTGCAGCACGACCTTGACCGGCGCAAGCCCGGCACCAGCCGGca                              <  3:354787/147‑1 (MQ=255)                                                                                                                       cGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATCGTCGATGGATGCCCACCGGGCCTGGAAATTTCCCTCGCCGACCTGCAGCACGACCTTGACCGGCGCAAGCCCGGCACCAGCCGGca                              <  1:217976/147‑1 (MQ=255)                                                                                                                          cAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTGGAAATTTCCCTCGCCGACCTgc                                                                      >  5:65736/1‑104 (MQ=255)                                                                                                                          cAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTGGAAATTTCCCTCGCCGACCTgc                                                                      <  6:65736/104‑1 (MQ=255)                                                                                                                           aaGCTGTTCACTGTCACCACCGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTGGAAATTTCCCTCGCCGACCTGCAGCACGACCTTGACCGGCGCAAGCCCGGCACCAGCCGGCAcaccac                        <  6:171899/149‑1 (MQ=255)                                                                                                                              cTGTTCACTGTCACCACCGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTGGAAATTTCCCTCGCCGACCTGCAGCACGACCTTGACCGGCGCAAGCCCGGCACCAGCCGGCACaccacc                       >  2:137974/1‑147 (MQ=255)                                                                                                                                    aCTGTCACCACCGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTGGAAATTTCCCTCGCCGACCTGCAGCACGACCTTGACCGGCGCAAGccc                                            >  7:96850/1‑120 (MQ=255)                                                                                                                                    aCTGTCACCACCGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTGGAAATTTCCCTCGCCGACCTGCAGCACGACCTTGACCGGCGCAAGccc                                            <  8:96850/120‑1 (MQ=255)                                                                                                                                     cTGTCACCACCGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTGGAAATTTCCCTCGCCGACCTGCAGCACGACCTTGACCGGCGCAAGCCCGGCACCAGCCGGCACACCACCCAGCGCCAg              >  3:351927/1‑149 (MQ=255)                                                                                                                                          accaccGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTGGAAATTTCCCTCGCCGACCTGCAGCACGACCTTGACCGGCGCAAGCCCGGCACCAGCCGGCACACCCCCCAGCGCCAGGAAGc         >  8:148091/1‑149 (MQ=255)                                                                                                                                          accaccGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTGGAAATTTCCCTCGCCGACCTGCAGCACGACCTTGACCGGCGCAAGCCCGGCACCAGCCGGCACACCACCCAGCGCCAGGAAGc         >  3:271350/1‑149 (MQ=255)                                                                                                                                            caccGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTGGAAATTTCCCTCGCCGACCTGCGGCACGACCTTGACCGGCGCAAGCCCGGCACCAGCCGGCACACCACCCAGCGCCAGGAAGcc        >  2:287727/1‑148 (MQ=255)                                                                                                                                            caccGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTGGAAATTTCCCTCGCCGACCTGCAGCACGACCTTGACCGGCGCAAGCCCGGCACCAGCCGGCACACCACCCAGCGCCAGGAAGcc        >  4:371483/1‑148 (MQ=255)                                                                                                                                               cGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTGGAAATTTCCCTCGCCGACCTGCAGCACGACCTTGACCGGCGCAAGCCCGGCACCAGCCGGCACACCACCCAGCGCCAGGAAGCcgac     >  7:349953/1‑148 (MQ=255)                                                                                                                                                gCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTGGAAATTTCCCTCGCCGACCTGCAGCACGACCTTGACCGGCGCAAGCCCGGCACCAGCCGGCACACCACCCAGCGCCAGGAAGCcgacga   <  3:371483/149‑1 (MQ=255)                                                                                                                                                 cTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTGGAAATTTCCCTCGCCGACCTGCAGCACGACCTTGACCGGCGCAAGCCCGGCACCAGCCGGCACACCACCCAGCGCCAGGAAGCCGACGAg  <  8:349953/149‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                        CGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCAT‑‑‑‑‑GGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTGGAAATTTCCCTCGCCGACCTGCAGCACGACCTTGACCGGCGCAAGCCCGGCACCAGCCGGCACACCACCCAGCGCCAGGAAGCCGACGAG  >  NC_002947/2054759‑2055051

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.