New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2360109 =	62 (1.030)	5 (0.090)	4/254	NT	7.2%	coding (1048/1134 nt)	PP_2075	membrane protein
	?	NC_002947	= 3840158	70 (1.210)					coding (1081/1158 nt)	PP_3389	membrane protein

GATGGATTTGCATCGTGCTGCAACTGGCTGCCGATGAAGTGCGCCGGGTGCAGTTGGATCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTT‑‑T‑TTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCGGGCAGGCCGGCCTCGCGGATGACCTTCGGCCAGCGCGGTCGCCAGCACAGCAGCAGGCTGAGCCAGTGGGC  >  NC_002947/2359965‑2360256                                                                                                                                                    |                                                                                                                                                           gaccgagctggccgaaggtcatccgcgaggccggcctgcccggcaagccagtcccacccgtgacaaccctgagcgactaccctcccgcaatccaggcacgcctgctcgccaacgccgaccgctggcagctcaagcccggcaagcggccg                                                                                                                                                           >  4:118304‑M1/148‑149 (MQ=255)   tgGATTTGCATCGTGCTGCAACTGGCTGCCGATGAAGTGCGCCGGGTGCAGTTGGATCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTT‑‑T‑TTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑tt                                                                                                                                               <  3:209792/149‑1 (MQ=255)     gATTTGCATCGTGCTGCAACTGGCTGCCGATGAAGTGCGCCGGGTGCAGTTGGATCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTT‑‑T‑TTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTg                                                                                                                                              <  3:69845/148‑1 (MQ=255)       tttGCATCGTGCTGCAACTGGCTGCCGATGAAGTGCGCCGGGTGCAGTTGGATCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTT‑‑T‑TTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGc                                                                                                                                            >  2:186836/1‑148 (MQ=255)           cATCGTGCTGCAACTGGCTGCCGATGAAGTGCGCCGGGTGCAGTTGGATCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTT‑‑T‑TTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAg                                                                                                                                         >  6:163156/1‑147 (MQ=255)           cATCGTGCTGCAACTGGCTGCCGATGAAGTGCGCCGGGTGCAGTTGGATCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTT‑‑T‑TTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGc                                                                                                                                        <  6:137017/148‑1 (MQ=255)            aTCGTGCTGCAACTGGCTGCCGATGAAGTGCGCCGGGTGCAGTTGGATCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTT‑‑T‑TTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGCAg                                                                                                                                      <  1:114754/149‑1 (MQ=255)              cGTGCTGCAACTGGCTGCCGATGAAGTGCGCCGGGTGCAGTTGGATCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTT‑‑T‑TTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGc                                                                                                                                    >  2:61951/1‑149 (MQ=255)                tgctgcAACTGGCTGCCGATGAAGTGCGCCGGGTGCAGTTGGATCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTT‑‑T‑TTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGt                                                                                                                                  >  5:96796/1‑149 (MQ=255)                   tgcAACTGGCTGCCGATGAAGTGCGCCGGGTGCAGTTGGATCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTT‑‑T‑TTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGcc                                                                                                                               >  2:198618/1‑149 (MQ=255)                     cAACTGGCTGCCGATGAAGTGCGCCGGGTGCAGTTGGATCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTT‑‑T‑TTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTg                                                                                                                             >  3:159236/1‑149 (MQ=255)                     atccgcgaggccggcctgcccggcaagccagtcccacccgtgacaaccctgagcgactaccctcccgcaatccaggcacgcctgctcgccaacgccgaccgctggcagctcaagcccggcaagcggccgg                                                                                                                                                          >  6:246101‑M1/128‑130 (MQ=255)                     atccgcgaggccggcctgcccggcaagccagtcccacccgtgacaaccctgagcgactaccctcccgcaatccaggcacgcctgctcgccaacgccgaccgctggcagctcaagcccggcaagcggccgg                                                                                                                                                          <  5:246101‑M1/3‑1 (MQ=255)                           gCTGCCGATGAAGTGCGCCGGGTGCAGTTGGATCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTT‑‑T‑TTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGc                                                                                                                       <  5:163156/149‑1 (MQ=255)                           gCTGCCGATGAAGTGCGCCGGGTGCAGATGGTTCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGCGCGCTTGAGTGGTTT‑‑T‑TTCGCCGGCCGCTTGCCGGGCTTGAGCTCCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGAGCCTGGATTGc                                                                                                                       >  6:279407/1‑149 (MQ=25)                             tGCCGATGAAGTGCGCCGGGTGCAGTTGGATCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTT‑‑T‑TTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCgg                                                                                                                     >  7:213978/1‑149 (MQ=255)                               ccGATGAAGTGCGCCGGGTGCAGTTGGATCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTT‑‑T‑TTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCgggt                                                                                                                   <  8:329532/149‑1 (MQ=255)                               ccGATGAAGTGCGCCGGGTGCAGTTGGATCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTT‑‑T‑TTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCggg                                                                                                                    <  6:96796/148‑1 (MQ=255)                               ccGATGAAGTGCGCCGGGTGCAGTTGGATCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTT‑‑T‑TTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCgg                                                                                                                     <  5:40733/147‑1 (MQ=255)                                 gATGAAGTGCGCCGGGTGCAGTTGGATCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTT‑‑T‑TTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCgggtgg                                                                                                                 >  1:222584/1‑149 (MQ=255)                                 gATGAAGTGCGCCGGGTGCAGTTGGATCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTT‑‑T‑TTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCgggtgg                                                                                                                 <  3:278941/149‑1 (MQ=255)                                 gATGAAGTGCGCCGGGTGCAGTTGGATCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTT‑‑T‑TTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCgggtgg                                                                                                                 <  3:325008/149‑1 (MQ=255)                                 gATGAAGTGCGCCGGGTGCAGTTGGATCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTT‑‑T‑TTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCgggtgg                                                                                                                 <  3:351650/149‑1 (MQ=255)                                    gAAGTGCGCCGGGTGCAGTTGGATCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTT‑‑T‑TTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCgggtggg                                                                                                                >  6:301141/1‑147 (MQ=255)                                        tGCGCCGGGTGCAGTTGGATCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTTGGTGTACCCCGCCCGGTTCCGGGGATTGAGAAGCCAGCGGTCGGAT‑‑‑‑‑‑‑AAGGAGACCAGGATTCCCTGATTTGCGGGTGGTTAg                                                                                                             >  1:307219/1‑149 (MQ=255)                                              gggTGCAGTTGGATCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTT‑‑T‑TTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTg                                                                                                                             >  1:250005/1‑124 (MQ=255)                                              gggTGCAGTTGGATCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTT‑‑T‑TTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTg                                                                                                                             <  2:250005/124‑1 (MQ=255)                                              gggTGCAGTTGGATCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTT‑‑T‑TTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAgg                                                                                                    <  2:328702/149‑1 (MQ=255)                                                gTGCAGTTGGATCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTT‑‑T‑TTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGt                                                                                                  <  8:52688/149‑1 (MQ=255)                                                 tGCAGTTGGATCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTT‑‑T‑TTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGtt                                                                                                 >  4:113113/1‑149 (MQ=255)                                                    aGTTGGATCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTT‑‑T‑TTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGt                                                                                               >  5:249937/1‑148 (MQ=255)                                                      ttGGATCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTT‑‑T‑TTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCAc                                                                                            <  8:213978/149‑1 (MQ=255)                                                        ggATCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTT‑‑T‑TTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACgg                                                                                          >  6:376423/1‑149 (MQ=255)                                                             aGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTT‑‑T‑TTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTgg                                                                                      <  1:198618/148‑1 (MQ=255)                                                              gTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTT‑‑T‑TTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCGGTTGGGTAGTCGCTCAGGGTTGTCACGGGTggg                                                                                     >  6:225615/1‑148 (MQ=255)                                                                 aCTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTT‑‑T‑TTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTg                                                                                 >  3:192747/1‑149 (MQ=255)                                                                 aCTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTT‑‑T‑TTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTg                                                                                 >  7:2994/1‑149 (MQ=255)                                                                   tttCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTT‑‑T‑TTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGt                                                                                        >  4:167818/1‑140 (MQ=255)                                                                   tttCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTT‑‑T‑TTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGt                                                                                        <  3:167818/140‑1 (MQ=255)                                                                   tttCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTT‑‑T‑TTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTgg                                                                                      <  7:65788/142‑1 (MQ=255)                                                                   tttCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTT‑‑T‑TTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTgg                                                                                      >  8:65788/1‑142 (MQ=255)                                                                    ttCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTT‑‑T‑TTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCt                                                                              >  8:164939/1‑149 (MQ=255)                                                                     tCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTT‑‑T‑TTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGc                                                                               <  4:192747/147‑1 (MQ=255)                                                                          ggCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTT‑‑T‑TTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCg                                                                         <  5:301141/148‑1 (MQ=255)                                                                               gTTGAGGATTAGAGCGCTTGCGTGGTTT‑‑T‑TTCGCCGGCCGCTTGCCGGGCGTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCGTGTGGGTAGTCGATCAGGGTTGGCCCGGGTGGGACGGGCTTGCCGGGCAgg                                                                   >  8:276162/1‑149 (MQ=14)                                                                                   aggagTAGAGCGCTTGCGTGGTTT‑‑T‑TTCGCGGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCTGGG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCGTGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCGGGCa                                                                     <  5:246552/143‑1 (MQ=255)                                                                                   aggagTAGAGCGCTATCGTGGTTT‑‑T‑TTCGCAGGCCGCTTGCCCGGCTTCAGCTGCCAGCGGACTGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGCTTGTCACGGGTGGGACTGGCTTGCGGGGCa                                                                     >  6:246552/1‑143 (MQ=14)                                                                                     gagTAGAGCGCTTGCGTGGTTT‑‑T‑TTCGCCGTCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCCTGCCCGGCAagccagtc                                                             <  5:41287/149‑5 (MQ=14)                                                                                     gagTAGAGCGCTTGCGTGGTTT‑‑T‑TTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCCTGCCCGGCAagccagtc                                                             <  4:159236/149‑5 (MQ=255)                                                                                        tAGAGCGCTTGCGTGGTTT‑‑T‑TTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCTGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCACTCAGGGTTGTCACGGGTGGGACTGGCTTGCCGGGCAggccggccac                                                           <  6:292847/148‑3 (MQ=255)                                                                                          gagCGCTTGCGTGGTTT‑‑T‑TTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCGGGCAGGCCGGCCTcgcg                                                        >  1:180328/1‑149 (MQ=39)                                                                                          gagCGCTTGCGTGGTTT‑‑T‑TTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCGGCCTgcccggcaagcca                                                        <  3:100647/149‑7 (MQ=14)                                                                                           aggggttGCGTGGTTT‑‑T‑TTCGCCGGCCGGTTGCCGGGGTTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGCTGGCGTGCCTGGATTGCGGGTGGGTAGTCGGTCAGGGTTGTCACGGGTGGGACTGGCTTGCCGGGCAGGCCGGCCTcgcg                                                        <  8:20005/143‑1 (MQ=11)                                                                                           agCGCTTGCGTGGTTT‑‑T‑TTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTc                                                                                                           >  5:48987/1‑97 (MQ=255)                                                                                           agCGCTTGCGTGGTTT‑‑T‑TTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTc                                                                                                           <  6:48987/97‑1 (MQ=255)                                                                                             cgcTTGCGTGGTTT‑‑T‑TTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCGGGCAGGCCGGCCTCGCGGAt                                                     >  4:79948/1‑149 (MQ=37)                                                                                               cTTGCGTGGTTT‑‑T‑TTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCGGGCAGGCCGGCCTCGCGGATGa                                                   <  3:113113/149‑1 (MQ=35)                                                                                                  gCGTGGTTT‑‑T‑TTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCGGGCAGGCCTGCCTCGCGGATGACCt                                                >  7:286534/1‑149 (MQ=21)                                                                                                     tGGGTT‑‑T‑TTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCGGGCAGGCCGGCCTCGCGGATGACCTTCg                                             <  5:279460/149‑1 (MQ=17)                                                                                                      ggTTT‑‑T‑TTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCGGGCAGGCCGGCCTCGCGGATGACCTTCgg                                            <  1:150923/149‑1 (MQ=34)                                                                                                          tcgccaacgccgaccgctggcagctcaagcccggcaagcggcCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCGGGCAGGCCGGCCTCGCGGATGACCTTCGGc                                           <  3:131279‑M1/107‑1 (MQ=255)                                                                                                              caacgccgaccgctggcagctcaagcccggcaagcggcCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCGGGAGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCGGGCAGGCCGGCCTCGCGGATGACCTTCGGCCAgc                                       <  7:40647‑M1/111‑1 (MQ=255)                                                                                                               aacgccgaccgctggcagctcaagcccggcaagcggcCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCGGGCAGGCCGGCCTCGCGGATGACCTTCGGCCAgcg                                      <  8:200703‑M1/112‑1 (MQ=255)                                                                                                                    cgggctcTTGCCGGGGTTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGTGCAGGCTTGCATTGATTGCTGGTGGTTAGTCGCTCTGGGTTGTCACGTGTGGGTCTGGCTTGCCGGGGAGTCCGGCCTCGCGGATGACCTTCGGCCAGCGCGGTc                                 <  8:286534/143‑1 (MQ=11)                                                                                                                    cgaccgctggcagctcaagcccggcaagcggcCGGCGGTCGGCGTTGGCGAGCAGGCGTGCCTGGATTGCGGGAGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCGGGCAGGCCGGCCTCGCGGATGACCTTCGGCCAg                                        <  6:35444‑M1/117‑1 (MQ=255)                                                                                                                    cgaccgctggcagctcaagcccggcaagcggcCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCGGGAGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCGGGCAGGCCGGCCTCGCGGATGACCTTCGGCCAGCGCGGTc                                 <  7:354338‑M1/117‑1 (MQ=255)                                                                                                                                gggCTTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTAGTCACGGGTGGGACTGGCTTGCCGGGCAGGCCGGCCTCGCGGATGACCTTCGGCCAGCGCGGTCGCcagcacagca                     <  1:186836/149‑1 (MQ=17)                                                                                                                                        gCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCGGGCAGGCCGGCCTCGCGGATGACCTTCGGCCAGCGCGGTCGCCAGCACAGCAGCAGGCt              >  3:243041/1‑148 (MQ=32)                                                                                                                                          tGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCGGGCAGGCCGGCCTCGCGGATGACCTTCGGCCAGCGCGGTCGCCAGCACAGCAGCAGGCTGAg           >  5:170432/1‑149 (MQ=32)                                                                                                                                            ccAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCGGGCAGGCCGGCCTCGCGGATGACCTTCGGCCAGCGCGGTCGCCAGCACAGCAGCAGGCTGAGc          >  5:296047/1‑148 (MQ=32)                                                                                                                                                 ggcCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCGGGCAGGCCGGCCTCGCGGATGACCTTCGGCCAGCGCGGTCGCCAGCACAGCAGCAGGCTGAGCCAGTgg    >  7:200703‑M1/4‑149 (MQ=255)                                                                                                                                                   tCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCGGGCAGGCCGGCCTCGCGGATGACCTTCGGCCAGCGCGGTCGCCAGCAcagcagca                  >  3:295947/1‑133 (MQ=32)                                                                                                                                                   tCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCGGGCAGGCCGGCCTCGCGGATGACCTTCGGCCAGCGCGGTCGCCAGCAcagcagca                  <  4:295947/133‑1 (MQ=32)                                                                                                                                                   tCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCGGGCAGGCCGGCCTCGCGGATGACCTTCGGCCAGCGCGGTCGCCAGCACAGCAGCAGGCTGAGCCAGTGGGc  >  2:325395/1‑149 (MQ=33)                                                                                                                                                   tCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCGGGCAGGCCGGCCTCGCGGATGACCTTCGGCCAGCGCGGTCGCCAGCACAGCAGCAGGCTGAGCCAGTGGGc  <  2:180328/149‑1 (MQ=33)                                                                                                                                                    |                                                                                                                                                           GATGGATTTGCATCGTGCTGCAACTGGCTGCCGATGAAGTGCGCCGGGTGCAGTTGGATCAGTCACTTTCGTTGGCCTGTTGAGGAGTAGAGCGCTTGCGTGGTTT‑‑T‑TTCGCCGGCCGCTTGCCGGGCTTGAGCTGCCAGCGGTCGGCG‑‑‑‑‑‑‑TTGGCGAGCAGGCGTGCCTGGATTGCGGGTGGGTAGTCGCTCAGGGTTGTCACGGGTGGGACTGGCTTGCCGGGCAGGCCGGCCTCGCGGATGACCTTCGGCCAGCGCGGTCGCCAGCACAGCAGCAGGCTGAGCCAGTGGGC  >  NC_002947/2359965‑2360256

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.