New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 2360109 =62 (1.030)5 (0.090) 4/254 NT 7.2% coding (1048/1134 nt) PP_2075 membrane protein
?NC_002947 = 3840158 70 (1.210)coding (1081/1158 nt) PP_3389 membrane protein

GACCGCGCTGGCCGAAGGTCATCCGCGAGGCCGGCCTGCCCGGCAAGCCAGTCCCACCCGTGACAACCCTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTGCGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTCGAGCGCA  >  NC_002947/3840012‑3840305
                                                                                                                                                     |                                                                                                                                                    
gACCGAGCTGGCCGAAGGTCATCCGCGAGGCCGGCCTGCCCGGCAAGCCAGTCCCACCCGTGACAACCCTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCcg                                                                                                                                                    >  4:118304‑M2/1‑147 (MQ=255)
          gCCGAAGGTCATCCGCGAGGCCGGCCTGCCCGGCAAGCCAGTCCCACCCGTGACAACCCTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAg                                                                                                                                           <  3:137203/148‑1 (MQ=32)
                    aTCCGCGAGGCCGGCCTGCCCGGCAAGCCAGTCCCACCCGTGACAACCCTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCcgg                                                                                                                                                   >  6:246101‑M2/1‑127 (MQ=255)
                    aTCCGCGAGGCCGGCCTGCCCGGCAAGCCAGTCCCACCCGTGACAACCCTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCcgg                                                                                                                                                   <  5:246101‑M2/130‑4 (MQ=255)
                    aTCCGCGAGGCCGGCCTGCCCGGCAAGCCAGTCCCACCCGTGACAACCCTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAacac                                                                                                                                >  2:99247/1‑149 (MQ=21)
                     tCCGCGAGGCCGGCCTGCCCGGCAAGCCAGTCCCACCCGTGACAACCCTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAAcg                                                                                                                               >  4:66645/1‑149 (MQ=38)
                       cgcgAGGCCGGCCTGCCCGGCAAGCCAGTCCCACCCGTGACAACCCTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAAcgcg                                                                                                                             >  7:99389/1‑149 (MQ=39)
                        gcgAGGCCGGCCTGCCCGGCAAGCCAGTCCCACCCGTGACAACCCTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACgcgc                                                                                                                            <  3:66645/149‑1 (MQ=40)
                              ccggccTGCCCGGCAAGCCAGTCCCACCCGTGACAACCCTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCGAAGGGGCACCGCAGTGAGAGCTAAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAAcgcg                                                                                                                             >  1:122918/1‑144 (MQ=14)
                                ggccTGCCCGGCAAGCCAGTCCCACCCGTGACAACCCTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAAcgc                                                                                                                              <  8:100241/139‑1 (MQ=39)
                                ggccTGCCCGGCAAGCCAGTCCCACCCGTGACAACCCTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAAcgc                                                                                                                              >  7:100241/1‑139 (MQ=39)
                                      cccGGCAAGCCAGTCCCACCCGTGACAACCCTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAgcgc                                                                                                               <  6:59154/148‑1 (MQ=255)
                                        cGGCAAGCCAGTCCCACCCGTGACAACCCTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAg                                                                                                            <  5:159032/149‑1 (MQ=255)
                                          gCAAGCCAGTCCCACCCGTGACAACCCTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGc                                                                                                           >  3:76566/1‑148 (MQ=255)
                                             aGCCAGTCCCACCCGTGACAACCCTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGaaa                                                                                                       <  6:140130/149‑1 (MQ=255)
                                                   tCCCACCCGTGACAACCCTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCt                                                                                                 >  5:6905/1‑149 (MQ=255)
                                                   tCCCACCCGTGACAACCCTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCt                                                                                                 >  3:199164/1‑149 (MQ=255)
                                                   tCCCACCCGTGACAACCCTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGAAGATCCAAAGCGCAAGCGAAACCGGCt                                                                                                 >  6:17730/1‑149 (MQ=255)
                                                     ccACCCGTGACAACCCTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTgc                                                                                               >  6:162111/1‑149 (MQ=255)
                                                       aCCCGTGACAACCCTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTgcgc                                                                                             >  4:341352/1‑149 (MQ=255)
                                                       aCCCGTGACAACCCTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTgcgc                                                                                             >  4:240565/1‑149 (MQ=255)
                                                           gTGACAACCCTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTGCGCCCaa                                                                                         >  4:139078/1‑149 (MQ=255)
                                                              aCAACCCTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTGCGCCCAACg                                                                                       >  7:285387/1‑148 (MQ=255)
                                                               cAACCCTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTGCGCCCAACg                                                                                       >  3:105300/1‑147 (MQ=255)
                                                                  cccTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTGCGCCCAACGAAGAt                                                                                  <  7:348695/149‑1 (MQ=255)
                                                                   ccTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTGCGCCCAACGAAGAtt                                                                                 <  8:285387/149‑1 (MQ=255)
                                                                   ccTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTGCGCCCAACGAAGAtt                                                                                 >  4:37558/1‑149 (MQ=255)
                                                                         cGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTGCGCCCAACGAAGATTGTGTCt                                                                           <  8:342897/149‑1 (MQ=255)
                                                                           aCTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTGCGCCCAACGAAGATTGTGTCTGa                                                                         <  7:207051/149‑1 (MQ=255)
                                                                             tACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAAcgc                                                                                                                              >  6:322240/1‑94 (MQ=255)
                                                                             tACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAAcgc                                                                                                                              <  5:322240/94‑1 (MQ=255)
                                                                               cccTCCCGCAATCCAGGTACGCCTGCTCGCCAACGCCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTGCGCCCAACGAAGATTGTGTCTGAATTc                                                                     <  6:45621/149‑1 (MQ=255)
                                                                               cccTCCCGCAATCCAGGCACGCCTGCTCGCCTAACGCCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTGCGCCCAACGAAGATTGTGTCTGAAtt                                                                      >  1:40565/1‑149 (MQ=255)
                                                                                ccTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTGCGCCCAACGAAGATTGTGTCTGAAtt                                                                      >  4:208851/1‑147 (MQ=255)
                                                                                ccTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTGCGCCCAACGAAGATTGTGTCTGAATTCa                                                                    <  4:76566/149‑1 (MQ=255)
                                                                                 cTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTGCGCCCAACGAAGATTGTGTCTGAAtt                                                                      >  4:218303/1‑146 (MQ=255)
                                                                                    ccGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTGCGCCCAACGAAGATTGTGTCTGAATTCAGaa                                                                 <  8:99389/148‑1 (MQ=255)
                                                                                    ccGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTGCGCCCAACGAAGATTGTGTCTGAATTCAGAAt                                                                >  8:339217/1‑149 (MQ=255)
                                                                                     cGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTGCGCCCAACGAAGATTGTGTCTGAATTCAGAAtt                                                               <  3:139078/149‑1 (MQ=255)
                                                                                      gCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTGCGCCCAACGAAGATTGTGTCTGAATTCAGAATTc                                                             <  6:115152/149‑1 (MQ=255)
                                                                                        aaTCCAGGCACGCCTGCTCGCCAACGCCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTGCGCCCAACGAAGATTGTGTCTGAATTCAGAATTCg                                                            >  3:360406/1‑148 (MQ=255)
                                                                                          tCCAGGCACGCCTGCTCGCCAACGTCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTGCGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAAc                                                         >  4:152662/1‑149 (MQ=255)
                                                                                          tCCAGGCACGCCTGCTCGCCAACGCCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTGCGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAAc                                                         <  8:229455/149‑1 (MQ=255)
                                                                                          tCCAGGCACGCCTGCTCGCCAACGCCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTGCGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAAc                                                         <  5:115976/149‑1 (MQ=255)
                                                                                            cAGGCACGCCTGCTCGCCAACGCCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTGCGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACgt                                                       <  2:169118/149‑1 (MQ=255)
                                                                                            cAGGCACGCCTGCTCGCCAACGCCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTGCGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACgt                                                       <  2:174650/149‑1 (MQ=255)
                                                                                            cAGGCACGCCTGCTCGCCAACGCCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTGCGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACgt                                                       <  3:208851/149‑1 (MQ=255)
                                                                                            cAGGCACGCCTGCTCGCCAACGCCGACCCC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTGCGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACgt                                                       >  1:216217/1‑149 (MQ=255)
                                                                                             aGGCACGCCTGCTCGCCAACGCCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTGCGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACgtg                                                      >  6:292539/1‑149 (MQ=255)
                                                                                               gCACGCCTGCTCGCCAACGCCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCaa                                                                                                             <  5:298797/93‑1 (MQ=255)
                                                                                               gCACGCCTGCTCGCCAACGCCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCaa                                                                                                             >  6:298797/1‑93 (MQ=255)
                                                                                                         tCGCCAACGCCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCcggcgttggcgagcaggcgtgcctggattgcgggtgggtagtcgctcagggttgtcacgggtgggactggcttgccgggcaggccggcctcgcggatgaccttcggc                                           <  3:131279‑M2/149‑108 (MQ=255)
                                                                                                           gCCAACGCCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTGCGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATc                                          <  3:240565/147‑1 (MQ=255)
                                                                                                             cAACGCCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCcggcgttggcgagcaggcgtgcctggattgcgggagggtagtcgctcagggttgtcacgggtgggactggcttgccgggcaggccggcctcgcggatgaccttcggccagc                                       <  7:40647‑M2/149‑112 (MQ=255)
                                                                                                             cAACGCCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTGCGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCAccc                                      >  8:305672/1‑149 (MQ=255)
                                                                                                               aaCGCCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCcggcgttggcgagcaggcgtgcctggattgcgggtgggtagtcgctcagggttgtcacgggtgggactggcttgccgggcaggccggcctcgcggatgaccttcggccagcg                                      <  8:200703‑M2/149‑113 (MQ=255)
                                                                                                                  gtcGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTGCGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGtt                                  <  3:152662/147‑1 (MQ=255)
                                                                                                                   ccGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTGCGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTtc                                 <  2:122918/149‑1 (MQ=255)
                                                                                                                   ccGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTGCGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTtc                                 <  4:128016/149‑1 (MQ=255)
                                                                                                                    cGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCcggcgttggcgagcaggcgtgcctggattgcgggagggtagtcgctcagggttgtcacgggtgggactggcttgccgggcaggccggcctcgcggatgaccttcggccagcgcggtc                                 <  7:354338‑M2/149‑118 (MQ=255)
                                                                                                                    cGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCcggcggtcggcgttggcgagcaggcgtgcctggattgcgggagggtagtcgctcagggttgtcacgggtgggactggcttgccgggcaggccggcctcgcggatgaccttcggccag                                 <  6:35444‑M2/149‑118 (MQ=255)
                                                                                                                     gACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTGCGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTtct                                >  5:76385/1‑148 (MQ=255)
                                                                                                                       ccGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTGCGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCAt                             <  2:216217/149‑1 (MQ=255)
                                                                                                                       ccGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTGCGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCAt                             <  3:37558/149‑1 (MQ=255)
                                                                                                                               gCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAACACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTGCGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAAc                                                         <  7:238076/115‑1 (MQ=255)
                                                                                                                               gCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTGCGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAAc                                                         >  8:238075/1‑115 (MQ=255)
                                                                                                                               gCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTGCGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAAc                                                         <  7:238075/115‑1 (MQ=255)
                                                                                                                               gCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTGCGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTg                       >  7:73194/1‑149 (MQ=255)
                                                                                                                                    tCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTGCGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCg                  >  4:293571/1‑149 (MQ=255)
                                                                                                                                    tCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTGCGCCCAACGAAGATAGTGTCTGAATTCAGAATTCGAACGTGAACCCCACCATCACCCGGTTCTCATCCGCTGCATCg                  >  5:15153/1‑149 (MQ=255)
                                                                                                                                    tCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTGCGCCCAACGAAGATAGCGTCTGCATACAGAATTCGAACGTGTACCCCCCGAGCCCCCGGTTCTCATCCGCTGCAGCg                  >  5:20453/1‑149 (MQ=255)
                                                                                                                                      aaGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTGCGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCt                        >  2:277432/1‑141 (MQ=255)
                                                                                                                                      aaGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTGCGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCt                        <  1:277432/141‑1 (MQ=255)
                                                                                                                                      aaGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTGCGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCgg                 >  4:169037/1‑148 (MQ=255)
                                                                                                                                          ccGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCATAGCGCAAGCGAAACCGGCTGCGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCaaaa            <  5:292539/149‑1 (MQ=255)
                                                                                                                                          ccGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTGCGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCaaaa            <  6:547/149‑1 (MQ=255)
                                                                                                                                          ccGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTGCGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCaaaa            <  5:40985/149‑1 (MQ=255)
                                                                                                                                              cAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCCGATCCAAACCGCAAGCGAAACCGGCTGCGCCCAACGAAGATTGTGTCTGAATTCAGAATTCCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTc         <  1:99247/149‑1 (MQ=255)
                                                                                                                                                  cggccggtGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTGCGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTCGAgcg    >  6:225247/1‑149 (MQ=255)
                                                                                                                                                   ggccggcgttggcgagcaggcgtgcctggattgcgggtgggtagtcgctcagggttgtcacgggtgggactggcttgccgggcaggccggcctcgcggatgaccttcggccagcgcggtcgccagcacagcagcaggctgagccagtgg    >  7:200703‑M2/1‑3 (MQ=255)
                                                                                                                                                   ggccggcGAAAAAGCCACGCAAAACGCGCTGATCCAAAGCGCAAGCGAAACCGGCTGCGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTCGAgcg    >  1:28043/1‑148 (MQ=255)
                                                                                                                                                   ggccggcGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTGCGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTCGAgcg    >  1:153898/1‑148 (MQ=255)
                                                                                                                                                    gccggcGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTGCGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTCGAGcaca  >  7:34419/1‑149 (MQ=255)
                                                                                                                                                    gccggcGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTGCGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTCGAGCGCa  >  1:356527/1‑149 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
GACCGCGCTGGCCGAAGGTCATCCGCGAGGCCGGCCTGCCCGGCAAGCCAGTCCCACCCGTGACAACCCTGAGCGACTACCCTCCCGCAATCCAGGCACGCCTGCTCGCCAACGCCGACCGC‑‑TGGCAGCTCAAGCCCGGCAAGCGGCCGGCGAAAAAGCCACGCAAAACGCGCAGATCCAAAGCGCAAGCGAAACCGGCTGCGCCCAACGAAGATTGTGTCTGAATTCAGAATTCGAACGTGTACCCCACGATCACCCGGTTCTCATCCGCTGCATCGGCAAAATTCGAGCGCA  >  NC_002947/3840012‑3840305

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.