New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3015001	34 (0.560)	3 (0.050)	3/248	NT	8.5%	coding (1533/2610 nt)	bcsA	cellulose synthase and translocator subunit
	?	NC_002947	= 3015025	33 (0.580)					coding (1557/2610 nt)	bcsA	cellulose synthase and translocator subunit

CTGCATCGTCAAGGGTGGACATCAGCCTACCTGAGCATTCCGCAGGCTGCGGGCCTGGCCACTGAAAGCCTGTCGGCGCACATCGGCCAGC‑GCATTCGCTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTGGCCGGCCTGCCGCGGCTGGTGTTCCTGACGGCGCCACTGGCGTTCCTGTTGCTGCATGCCTACATCATCTACGCACCGG  >  NC_002947/3014858‑3015143                                                                                                                                                 |                                                                                                                                               cTGCATCGTCAAGGGTGGACATCAGCCTACCTGAGCATTCCGCAGGCTGCGGGCCTGGCCACTGAAAGCCTGTCGGCGCACATCGGCCAGC‑GCATTCGCTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGTTCgg                                                                                                                                           >  1:360444/1‑149 (MQ=255)         tCAAGGGTGGACATCAGCCTACCTGAGCATTCCGCAGGCTGCGGGCCTGGCCACTGAAAGCCTGTCGGCGCACATCGGCCAGC‑GCATTCGCTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGcc                                                                                                                                   >  6:286499/1‑149 (MQ=255)           aaGGGTGGACATCAGCCTACCTGAGCATTCCGCAGGCTGCGGGCCTGGCCACTGAAAGCCTGTCGGCGCACATCGGCCAGC‑GCATTCGCTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCt                                                                                                                                  >  1:335731/1‑148 (MQ=255)              ggTGGACATCAGCCTACCTGAGCATTCCGCAGGCTGCGGGCCTGGCCACTGAAAGCCTGTCGGCGCACATCGGCCAGC‑GCATTCGCTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGc                                                                                                                              <  5:226328/149‑1 (MQ=255)                     aTCAGCCTACCTGAGCATTCCGCAGGCTGCGGGCCTGGCCACTGAAAGCCTGTCGGCGCACATCGGCCAGC‑GCATTCGCTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTc                                                                                                                        >  2:168736/1‑148 (MQ=255)                           cTACCTGAGCATTCCGCAGGCTGCGGGCCTGGCCACTGAAAGCCTGTCGGCGCACATCGGCCAGC‑GCATTCGCTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGgaacaggctaaggccacgcccgaacagcggg                                                                                                                 <  8:160356‑M1/149‑32 (MQ=255)                                tGAGCATTCCGCAGGCTGCGGGCCTGGCCACTGAAAGCCTGTCGGCGCACATCGGCCAGC‑GCATTCGCTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGc                                                                                                            >  3:41268/1‑149 (MQ=255)                                   gCATTCCGCAGGCTGCGGGCCTGGCCACTGAAAGCCTGTCGGCGCACATCGGCCAGC‑GCATTCGCTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTAc                                                                                                         <  4:332798/149‑1 (MQ=255)                                    cATTCCGCAGGCTGCGGGCCTGGCCACTGAAAGCCTGTCGGCGCACATCGGCCAGC‑GCATTCGCTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACg                                                                                                        >  7:247359/1‑149 (MQ=255)                                     aTTCCGCAGGCTGCGGGCCTGGCCACTGAAAGCCTGTCGGCGCACATCGGCCAGC‑GCATTCGCTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGc                                                                                                       <  1:150033/149‑1 (MQ=255)                                           cAGGCTGCGGGCCTGGCCACTGAAAGCCTGTCGGCGCACATCGGCCAGCGGCATTCGCTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAAcg                                                                                                  >  1:278500/1‑149 (MQ=255)                                                  cGGGCCTGGCCACTGAAAGCCTGTCGGCGCACATCGGCCAGC‑GCATTCGCTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGAtgc                                                                                            <  1:168736/147‑1 (MQ=255)                                                            cACTGAAAGCCTGTCGGCGCACATCGGCCAGC‑GCATTCGCTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGgaacaggctaaggccacgcccgaacagcgggttgt                                                                                                             >  6:268326‑M1/1‑85 (MQ=255)                                                            cACTGAAAGCCTGTCGGCGCACATCGGCCAGC‑GCATTCGCTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGgaacaggctaaggccacgcccgaacagcgggttgt                                                                                                             <  5:268326‑M1/120‑36 (MQ=255)                                                               tGAAAGCCTGTCGGCGCACATCGGCCAGC‑GCATTCGCTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTggccg                                                                             >  8:49069/1‑149 (MQ=255)                                                               tGAAAGCCTGTCGGCGCACATCGGCCAGC‑GCATTCGCTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTggccg                                                                             >  1:313965/1‑149 (MQ=255)                                                                 aaaGCCTGTCGGCGCACATCGGCCAGC‑GCATTCGCTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTggccggc                                                                           >  3:189329/1‑149 (MQ=255)                                                                       tGTCGGCGCACATCGGCCAGC‑GCATTCGCTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTGGCCGGCCTGCcg                                                                     >  7:120710/1‑149 (MQ=255)                                                                             cgcACATCGGCCAGC‑GCATTCGCTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTGGCCGGCCTGCCGCGGCTg                                                               <  4:41268/149‑1 (MQ=255)                                                                                  aTCGGCCAGC‑GCATTCGCTGGGCCCGAGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTGGCCGGCCTGCCGCGGCTGGTGtt                                                          >  7:243501/1‑149 (MQ=255)                                                                                     ggCCAGC‑GCATTCGCTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTGGCCGGCCTGCCGCGGCTGGTGTTCCt                                                       >  1:376704/1‑149 (MQ=255)                                                                                         aGC‑GCATTCGCTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTGGCCGGCCTGCCGCGGCTGGTGTTCCTGACg                                                   >  7:42296/1‑149 (MQ=255)                                                                                                   gCTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTGGCCGGCCTGCCGCGGCTGGTGTTCCTGACGGCGCCACTg                                          <  8:247359/149‑1 (MQ=255)                                                                                                   gCTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTGGCCGGCCTGCCGCGGCTGGTGTTCCTGACGGCGCCACTg                                          <  2:335731/149‑1 (MQ=255)                                                                                                    cTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTGGCCGGCCTGCCGCGGCTGGTGTTCCTGACGGCGCCACTgg                                         <  2:278500/149‑1 (MQ=255)                                                                                                       ggCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTGGCCGGCCTGCCGCGGCTGGTGTTCCTGACGGCGCCACTGGCGt                                      >  5:101912/1‑149 (MQ=255)                                                                                                       ggCCCGTGGGATGGTGCAGAGCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTGGCCGGCCTGCCGCGGCTGGTGTTCCTGACGGCGCCACTGGCg                                       <  7:263176/148‑1 (MQ=255)                                                                                                          ccGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTGGCCGGCCTGCCGCGGCTGGTGTTCCTGACGGCGCCACTGGCGTTcc                                   <  2:360444/149‑1 (MQ=255)                                                                                                          ccGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTGGCCGGCCTGCCGCGGCTGGTGTTCCTGACGGCGCCACTGGCGTTcc                                   <  7:49069/149‑1 (MQ=255)                                                                                                          ccGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTGGCCGGCCTGCCGCGGCTGGTGTTCCTGACGGCGCCACTGGCGTTcc                                   >  7:86887/1‑149 (MQ=255)                                                                                                                          aTCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTGGCCGGCCTGCCGCGGCTGGTGTTCCTGACGGCGCCACTGGCGTTCCTGTTGCTGCATGCCTa                   >  5:384255/1‑149 (MQ=255)                                                                                                                           tCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTGGCCGGCCTGCCGCGGCTGGTGTTCCTGACGGCGCCACTGGCGTTCCTGTTGCTGCATGCCTa                   <  4:189329/148‑1 (MQ=255)                                                                                                                                 gCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTGGCCGGCCTGCCGCGGCTGGTGTTCCTGACGGCGCCACTGGCGTTCCTGTTGCTGCATGCCTACatcatc            <  2:313965/149‑1 (MQ=255)                                                                                                                                 gCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTGGCCGGCCTGCCGCGGCTGGTGTTCCTGACGGCGCCACTGGCGTTCCTGTTGCTGCATGCCTACatcatc            <  3:238189/149‑1 (MQ=255)                                                                                                                                   aCCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTGGCCGGCCTGCCGCGGCTGGTGTTCCTGACGGCGCCACTGGCGTTCCTGTTGCTGCATGCCTACATCATCTa          <  6:101912/149‑1 (MQ=255)                                                                                                                                       aCAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCcagcgggttgtcggtgcggaagatctgcaccatcccacgggcccagcgaatgcgctggccgatgtgcgccgacaggctttcagtg                                   >  6:268326‑M2/1‑35 (MQ=255)                                                                                                                                       aCAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCcagcgggttgtcggtgcggaagatctgcaccatcccacgggcccagcgaatgcgctggccgatgtgcgccgacaggctttcagtg                                   <  5:268326‑M2/120‑86 (MQ=255)                                                                                                                                           cccGCTGTTCGGGCGTGGCCTTAGCCTGTTCcagcgggttgtcggtgcggaagatctgcaccatcccacgggcccagcgaatgcgctggccgatgtgcgccgacaggctttcagtggccaggcccgcagcctgcggaatgctcaggtag  <  8:160356‑M2/149‑119 (MQ=255)                                                                                                                                           cccGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTGGCCGGCCTGCCGCGGCTGGTGTTCCTGACGGCGCCACTGGCGTTCCTGTTGCTGCATGCCTACATCATCTACGCACCgg  >  1:373599/1‑149 (MQ=255)                                                                                                                                            ccGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTGGCCGGCCTGCCGCGGCTGGTGTTCCTGACGGCGCCACTGGCGTTCCTGTTGCTGCATGCCTACATCATCTACGCACCgg  >  4:248495/1‑148 (MQ=255)                                                                                                                                            ccGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTGGCCGGCCTGCCGCGGCTGGTGTTCCTGACGGCGCCACTGGCGTTCCTGTTGCTGCATGCCTACATCATCTACGCACCgg  >  8:25858/1‑148 (MQ=255)                                                                                                                                                 |                                                                                                                                               CTGCATCGTCAAGGGTGGACATCAGCCTACCTGAGCATTCCGCAGGCTGCGGGCCTGGCCACTGAAAGCCTGTCGGCGCACATCGGCCAGC‑GCATTCGCTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTGGCCGGCCTGCCGCGGCTGGTGTTCCTGACGGCGCCACTGGCGTTCCTGTTGCTGCATGCCTACATCATCTACGCACCGG  >  NC_002947/3014858‑3015143

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.