New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3015001	34 (0.560)	3 (0.050)	3/248	NT	8.5%	coding (1533/2610 nt)	bcsA	cellulose synthase and translocator subunit
	?	NC_002947	= 3015025	33 (0.580)					coding (1557/2610 nt)	bcsA	cellulose synthase and translocator subunit

ATCAGCCTACCTGAGCATTCCGCAGGCTGCGGGCCTGGCCACTGAAAGCCTGTCGGCGCACATCGGCCAGC‑GCATTCGCTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTGGCCGGCCTGCCGCGGCTGGTGTTCCTGACGGCGCCACTGGCGTTCCTGTTGCTGCATGCCTACATCATCTACGCACCGGCATTGATGATTCTGCTGTACGTGCTGC  >  NC_002947/3014878‑3015170                                                                                                                                                     |                                                                                                                                                  aTCAGCCTACCTGAGCATTCCGCAGGCTGCGGGCCTGGCCACTGAAAGCCTGTCGGCGCACATCGGCCAGC‑GCATTCGCTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTc                                                                                                                                                   >  2:168736/1‑148 (MQ=255)            tGAGCATTCCGCAGGCTGCGGGCCTGGCCACTGAAAGCCTGTCGGCGCACATCGGCCAGC‑GCATTCGCTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGc                                                                                                                                       >  3:41268/1‑149 (MQ=255)               gCATTCCGCAGGCTGCGGGCCTGGCCACTGAAAGCCTGTCGGCGCACATCGGCCAGC‑GCATTCGCTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTAc                                                                                                                                    <  4:332798/149‑1 (MQ=255)                cATTCCGCAGGCTGCGGGCCTGGCCACTGAAAGCCTGTCGGCGCACATCGGCCAGC‑GCATTCGCTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACg                                                                                                                                   >  7:247359/1‑149 (MQ=255)                 aTTCCGCAGGCTGCGGGCCTGGCCACTGAAAGCCTGTCGGCGCACATCGGCCAGC‑GCATTCGCTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGc                                                                                                                                  <  1:150033/149‑1 (MQ=255)                       cAGGCTGCGGGCCTGGCCACTGAAAGCCTGTCGGCGCACATCGGCCAGCGGCATTCGCTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAAcg                                                                                                                             >  1:278500/1‑149 (MQ=255)                              cGGGCCTGGCCACTGAAAGCCTGTCGGCGCACATCGGCCAGC‑GCATTCGCTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGAtgc                                                                                                                       <  1:168736/147‑1 (MQ=255)                                           tGAAAGCCTGTCGGCGCACATCGGCCAGC‑GCATTCGCTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTggccg                                                                                                        >  8:49069/1‑149 (MQ=255)                                           tGAAAGCCTGTCGGCGCACATCGGCCAGC‑GCATTCGCTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTggccg                                                                                                        >  1:313965/1‑149 (MQ=255)                                             aaaGCCTGTCGGCGCACATCGGCCAGC‑GCATTCGCTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTggccggc                                                                                                      >  3:189329/1‑149 (MQ=255)                                                   tGTCGGCGCACATCGGCCAGC‑GCATTCGCTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTGGCCGGCCTGCcg                                                                                                >  7:120710/1‑149 (MQ=255)                                                         cgcACATCGGCCAGC‑GCATTCGCTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTGGCCGGCCTGCCGCGGCTg                                                                                          <  4:41268/149‑1 (MQ=255)                                                              aTCGGCCAGC‑GCATTCGCTGGGCCCGAGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTGGCCGGCCTGCCGCGGCTGGTGtt                                                                                     >  7:243501/1‑149 (MQ=255)                                                                 ggCCAGC‑GCATTCGCTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTGGCCGGCCTGCCGCGGCTGGTGTTCCt                                                                                  >  1:376704/1‑149 (MQ=255)                                                                     aGC‑GCATTCGCTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTGGCCGGCCTGCCGCGGCTGGTGTTCCTGACg                                                                              >  7:42296/1‑149 (MQ=255)                                                                               gCTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTGGCCGGCCTGCCGCGGCTGGTGTTCCTGACGGCGCCACTg                                                                     <  2:335731/149‑1 (MQ=255)                                                                               gCTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTGGCCGGCCTGCCGCGGCTGGTGTTCCTGACGGCGCCACTg                                                                     <  8:247359/149‑1 (MQ=255)                                                                                cTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTGGCCGGCCTGCCGCGGCTGGTGTTCCTGACGGCGCCACTgg                                                                    <  2:278500/149‑1 (MQ=255)                                                                                   ggCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTGGCCGGCCTGCCGCGGCTGGTGTTCCTGACGGCGCCACTGGCGt                                                                 >  5:101912/1‑149 (MQ=255)                                                                                   ggCCCGTGGGATGGTGCAGAGCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTGGCCGGCCTGCCGCGGCTGGTGTTCCTGACGGCGCCACTGGCg                                                                  <  7:263176/148‑1 (MQ=255)                                                                                      ccGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTGGCCGGCCTGCCGCGGCTGGTGTTCCTGACGGCGCCACTGGCGTTcc                                                              <  2:360444/149‑1 (MQ=255)                                                                                      ccGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTGGCCGGCCTGCCGCGGCTGGTGTTCCTGACGGCGCCACTGGCGTTcc                                                              >  7:86887/1‑149 (MQ=255)                                                                                      ccGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTGGCCGGCCTGCCGCGGCTGGTGTTCCTGACGGCGCCACTGGCGTTcc                                                              <  7:49069/149‑1 (MQ=255)                                                                                                      aTCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTGGCCGGCCTGCCGCGGCTGGTGTTCCTGACGGCGCCACTGGCGTTCCTGTTGCTGCATGCCTa                                              >  5:384255/1‑149 (MQ=255)                                                                                                       tCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTGGCCGGCCTGCCGCGGCTGGTGTTCCTGACGGCGCCACTGGCGTTCCTGTTGCTGCATGCCTa                                              <  4:189329/148‑1 (MQ=255)                                                                                                             gCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTGGCCGGCCTGCCGCGGCTGGTGTTCCTGACGGCGCCACTGGCGTTCCTGTTGCTGCATGCCTACatcatc                                       <  2:313965/149‑1 (MQ=255)                                                                                                             gCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTGGCCGGCCTGCCGCGGCTGGTGTTCCTGACGGCGCCACTGGCGTTCCTGTTGCTGCATGCCTACatcatc                                       <  3:238189/149‑1 (MQ=255)                                                                                                               aCCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTGGCCGGCCTGCCGCGGCTGGTGTTCCTGACGGCGCCACTGGCGTTCCTGTTGCTGCATGCCTACATCATCTa                                     <  6:101912/149‑1 (MQ=255)                                                                                                                   aCAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCcagcgggttgtcggtgcggaagatctgcaccatcccacgggcccagcgaatgcgctggccgatgtgcgccgacaggctttcagtg                                                              <  5:268326‑M2/120‑86 (MQ=255)                                                                                                                   aCAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCcagcgggttgtcggtgcggaagatctgcaccatcccacgggcccagcgaatgcgctggccgatgtgcgccgacaggctttcagtg                                                              >  6:268326‑M2/1‑35 (MQ=255)                                                                                                                       cccGCTGTTCGGGCGTGGCCTTAGCCTGTTCcagcgggttgtcggtgcggaagatctgcaccatcccacgggcccagcgaatgcgctggccgatgtgcgccgacaggctttcagtggccaggcccgcagcctgcggaatgctcaggtag                             <  8:160356‑M2/149‑119 (MQ=255)                                                                                                                       cccGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTGGCCGGCCTGCCGCGGCTGGTGTTCCTGACGGCGCCACTGGCGTTCCTGTTGCTGCATGCCTACATCATCTACGCACCgg                             >  1:373599/1‑149 (MQ=255)                                                                                                                        ccGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTGGCCGGCCTGCCGCGGCTGGTGTTCCTGACGGCGCCACTGGCGTTCCTGTTGCTGCATGCCTACATCATCTACGCACCgg                             >  8:25858/1‑148 (MQ=255)                                                                                                                        ccGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTGGCCGGCCTGCCGCGGCTGGTGTTCCTGACGGCGCCACTGGCGTTCCTGTTGCTGCATGCCTACATCATCTACGCACCgg                             >  4:248495/1‑148 (MQ=255)                                                                                                                              ttCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTGGCCGGCCTGCCGCGGCTGGTGTTCCTGACGGCGCCACTGGCGTTCCTGTTGCTGCATGCCTACATCATCTACGCACCGGCATtgat                      >  3:173348/1‑149 (MQ=255)                                                                                                                              ttCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTGGCCGGCCTGCCGCGGCTGGTGTTCCTGACGGCGCCACTGGCGTTCCTGTTGCTGCATGCCTACATCATCTACGCACCGGCATtgat                      <  8:120710/149‑1 (MQ=255)                                                                                                                                         ccTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTGGCCGGCCTGCCGCGGCTGGTGTTCCTGACGGCGCCACTGGCGTTCCTGTTGCTGCATGCCTACATCATCTACGCACCGGCATTGATGATTctgctg            >  7:219837/1‑148 (MQ=255)                                                                                                                                               ccTGTTCCAGCGGGTGTGCTACTCCAACGCGATGCTGCACTTTCTGGCCGGCCTGCCGCGGCTGGTGTTCCTGTCGGCGCCACTGGCGTTGCTGTTGCTGCATGCCTACATCATCTACGCACCGGCATTGATGATTCTGCTGTACGtgc     <  8:243501/149‑1 (MQ=255)                                                                                                                                                 tGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTGGCCGGCCTGCCGCGGCTGGTGTTCCTGACGGCGCCACTGGCGTTCCTGTTGCTGCATGCCTACATCATCTACGCACCGGCATTGATGATTCTGCTGTACGtgctg   >  3:235744/1‑149 (MQ=255)                                                                                                                                                 tGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTGGCCGGCCTGCCGCGGCTGGTGTTCCTGACGGCGCCACTGGCGTTCCTGTTGCTGCATGCCTACATCATCTACGCACCGGCATTGATGATTCTGCTGTACGtgctg   >  8:224275/1‑149 (MQ=255)                                                                                                                                                   ttCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTGGCCGGCCTGCCGCGGCTGGTGTTCCTGACGGCGCCACTGGCGTTCCTGTTGCTGCATGCCTACATCATCTACGCACCGGCATTGATGATTCTGCTGTACGtgctgc  <  3:248495/148‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                  ATCAGCCTACCTGAGCATTCCGCAGGCTGCGGGCCTGGCCACTGAAAGCCTGTCGGCGCACATCGGCCAGC‑GCATTCGCTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGTTCGGGCGTGGCCTTAGCCTGTTCCAGCGGGTGTGCTACGCCAACGCGATGCTGCACTTTCTGGCCGGCCTGCCGCGGCTGGTGTTCCTGACGGCGCCACTGGCGTTCCTGTTGCTGCATGCCTACATCATCTACGCACCGGCATTGATGATTCTGCTGTACGTGCTGC  >  NC_002947/3014878‑3015170

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.