New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3265802 | 46 (0.760) | 4 (0.070) | 4/244 | NT | 8.4% | coding (97/378 nt) | PP_2863 | membrane protein |
? | NC_002947 | = 3265877 | 45 (0.810) | coding (172/378 nt) | PP_2863 | membrane protein |
ACTGGTCCACGGCACATGGCTGAGGCGCTGCGTGGGCAACGGGCTGAAGGCGTGCGCAACGTGCGCCTGAAGCTGCTGCTGTTGGGCGTGC‑TTTGCCTGTTGCCCGGCCTGGGGGCGGCGCGCATGGCCTGGAACGATCAGGCCTGGTGGCCATTGGCGTTGTACCCGGCCATGAGCCTGATCAGCCTGTTGCTGTATTGGCAGGACAAGCGGCAGGCACGTAACCAGGCCTGGCGTACACCCGAGAAAGTGCTGCATGCCAGTGAGCTGCTCGGTGGTTGGCCGGGGGCGCTGT > NC_002947/3265655‑3265949 | aCTGGTCCACGGCACATGGCTGAGGCGCTGCGTGGGCAACGGGCTGAAGGCGTGCGCAACGTGCGCCTGAAGCTGCTGCTGTTGGGCGTGC‑TTTGCCTGTTGCCCGGCCTGGGGGCGGCGCGCATGGCCTGGAACGATCAGGCCtggtg > 3:298481/1‑149 (MQ=255) cTGGTCCACGGCACATGGCTGAGGCGCTGCGTGGGCAACGGGCTGAAGGCGTGCGCAACGTGCGCCTGAAGCTGCTGCTGTTGGGCGTGC‑TTTGCCTGTTGCCCGGCCTGGGGGCGGCGCGCATGGCCTGGAACGATCAGGCCtggtgg < 5:39334/149‑1 (MQ=255) tGGTCCACGGCACATGGCTGAGGCGCTGCGTGGGCAACGGGCTGAAGGCGTGCGCAACGTGCGCCTGAAGCTGCTGCTGTTGGGCGTGC‑TTTGCCTGTTGCCCGGCCTGGGGGCGGCGCGCATCGCCTGGAACGATCAGGCCTGGTGGc > 3:310176/1‑149 (MQ=255) cACGGCACATGGCTGAGGCGCTGCGTGGGCAACGGGCTGAAGGCGTGCGCAACGTGCGCCTGAAGCTGCTGCTGTTGGGCGTGC‑TTTGCCTGTTGCCCGGCCTGGGGGCGGCGCGCATGGCCTGGAACGATCAGGCCTGGTtacgtgcc > 6:323948‑M1/1‑141 (MQ=255) cACGGCACATGGCTGAGGCGCTGCGTGGGCAACGGGCTGAAGGCGTGCGCAACGTGCGCCTGAAGCTGCTGCTGTTGGGCGTGC‑TTTGCCTGTTGCCCGGCCTGGGGGCGGCGCGCATGGCCTGGAACGATCAGGCCTGGTGGCCATTg > 3:358074/1‑149 (MQ=255) cACGGCACATGGCTGAGGCGCTGCGTGGGCAACGGGCTGAAGGCGTGCGCAACGTGCGCCTGAAGCTGCTGCTGTTGGGCGTGC‑TTTGCCTGTTGCCCGGCCTGGGGGCGGCGCGCATGGCCTGGAACGATCAGGCCTGGTGGCCATTg > 3:321616/1‑149 (MQ=255) cGGCACATGGCTGAGGCGCTGCGTGGGCAACGGGCTGAAGGCGTGCGCAACGTGCGCCTGAAGCTGCTGCTGTTGGGCGTGC‑TTTGCCTGTTGCCCGGCCTGGGGGCGGCGCGCATGGCCTGGAACGATCAGGCCTGGTGGCCATTGGc < 7:6547/149‑1 (MQ=255) ggCACATGGCTGAGGCGCTGCGGGGGCAACGGGCTGAAGGCGTGCGCAACGTGCGCCTGAAGCTGCTGCTGTTGGGCGTGC‑TTTGCCTGTTGCCCGGCCTGGGGGCGGCGCGCATGGCCTGGAACGATCAGGCCTGGTGGCCATTGGCg < 5:237156/149‑1 (MQ=255) gCACATGGCTGAGGCGCTGCGTGGGCAACGGGCTGAAGGCGTGCGCAACGTGCGCCTGAAGCTGCTGCTGTTGGGCGTGC‑TTTGCCTGTTGCCCGGCCTGGGGGCGGCGCGCATGGCCTGCAACGATCAGGCCTGGTGGCCATTGGCGt < 6:317530/149‑1 (MQ=255) aTGGCTGAGGCGCTGCGTGGGCAACGGGCTGAAGGCGTGCGCAACGTGCGCCTGAAGCTGCTGCTGTTGGGCGTGC‑TTTGCCTGTTGCCCGGCCTGGGGGCGGCGCGCATGGCCTGGAACGATCAGGCCTGGTGGCCATTGGCGTTGTa > 8:127798/1‑149 (MQ=255) tGAGGCGCTGCGTGGGCAACGGGCTGAAGGCGTGCGCAACGTGCGCCTGAAGCTGCTGCTGTTGGGCGTGC‑TTTGCCTGTTGCCCGGCCTGGGGGCGGCGCGCATGGCCTGGAACGATCAGGCCTGGTGGCCATTGGCGTTGTACCCgg < 4:298481/149‑1 (MQ=255) gcgcTGCGTGGGCAACGGGCTGAAGGCGTGGGCAACGTGCGCCTGAAGCTGCTGCTGTTGGGCGTGC‑TTTGCCTGTTGCCCGGCCTGGGGGCGGCGCGCATGGCCTGGAACGATCAGGCCTGGTGGCCATTGGCGTTGTACCCGGCCAt > 1:32466/1‑149 (MQ=255) gTGGGCAACGGGCTGAAGGCGTGCGCAACGTGCGCCTGAAGCTGCTGCTGTTGGGCGTGC‑TTTGCCTGTTGCCCGGCCTGGGGGCGGCGCGCATGGCCTGGAACGATCAGGCCTGGTGGCCATTGGCGTTGTACCCgg > 5:102009/1‑138 (MQ=255) gTGGGCAACGGGCTGAAGGCGTGCGCAACGTGCGCCTGAAGCTGCTGCTGTTGGGCGTGC‑TTTGCCTGTTGCCCGGCCTGGGGGCGGCGCGCATGGCCTGGAACGATCAGGCCTGGTGGCCATTGGCGTTGTACCCgg < 6:102009/138‑1 (MQ=255) gTGGGCAACGGGCTGAAGGCGTGCGCAACGTGCGCCTGAAGCTGCTGCTGTTGGGCGTGC‑TTTGCCTGTTGCCCGGCCTGGGGGCGGCGCGCATGGCCTGGAACGATCAGGCCTGGTGGCCATTGGCGTTGTACCCGGCCATGAGCCt > 1:61099/1‑148 (MQ=255) tGGGCAACGGGCTGAAGGCGTGCGCAACGTGCGCCTGAAGCTGCTGCTGTTGGGCGTGC‑TTTGCCTGTTGCCCGGCCTGGGGGCGGCGCGCATGGCCTGGAACGATCAGGCCTGGTGGCCATTGGCGTTGTACCCGGCCATGAGCCTGa < 1:150451/149‑1 (MQ=255) ggCAACGGGCTGAAGGCGTGCGCAACGTGCGCCTGAAGCTGCTGCTGTTGGGCGTGC‑TTTGCCTGTTGCCCGGCCTGGGGGCGGCGCGCATGGCCTGGAACGATCAGGCCTGGTGGCCATTGGCGTTGTACCCGGCCATGAGCCTGAt > 6:8900/1‑148 (MQ=255) ggCAACGGGCTGAAGGCGTGCGCAACGTGCGCCTGAAGCTGCTGCTGTTGGGCGTGC‑TTTGCCTGTTGCCCGGCCTGGGGGCGGCGCGCATGGCCTGGAACGATCAGGCCTGGTGGCCATTGGCGTTGTACCCGGCCATGAGCCTGAt > 1:326503/1‑148 (MQ=255) aaCGGGCTGAAGGCGTGCGCAACGTGCGCCTGAAGCTGCTGCTGTTGGGCGTGC‑TTTGCCTGTTGCCCGGCCTGGGGGCGGCGCGCATGGCCTGGAACGATCAGGCCTGGTtacgtgcctgccgcttgtcctgccaatacagcaacagg > 2:348140‑M1/1‑111 (MQ=255) gggCTGAAGGCGTGCGCAACGTGCGCCTGAAGCTGCTGCTGTTGGGCGTGC‑TTTGCCTGTTGCCCGGCCTGGGGGCGGCGCGCATGGCCTGGAACGATCAGGCCTGGTGGCCATTGGCGTTGTACCCGGCCATGAGCCTGATCAGCCTg < 7:127798/149‑1 (MQ=255) gggCTGAAGGCGTGCGCAACGTGCGCCTGAAGCTGCTGCTGTTGGGCGTGC‑TTTGCCTGTTGCCCGGCCTGGGGGCGGCGCGCATGGCCTGGAACGATCAGGCCTGGTGGCCATTGGCGTTGTACCCGGCCATGAGCCTGATCAGCCTg < 7:261403/149‑1 (MQ=255) gCTGAAGGCGTGCGCAACGTGCGCCTGAAGCTGCTGCTGTTGGGCGTGC‑TTTGCCTGTTGCCCGGCCTGGGGGCGGCGCGCATGGCCTGGAACGATCAGGCCTGGTGGCCATTGGCGTTGTACCCGGCCATGAGCCTGATCAGCCTGtt < 7:29300/149‑1 (MQ=255) gAAGGCGTGCGCAACGTGCGCCTGAAGCTGCTGCTGTTGGGCGTGC‑TTTGCCTGTTGCCCGGCCTGGGGGCGGCGCGCATGGCCTGGAACGATCAGGCCTGGTGGCCATTGGCGTTGTACCCGGCCATGAGCCTGATCAGCCTGTTGCt > 8:313759/1‑149 (MQ=255) cgcAACGTGCGCCTGAAGCTGCTGCTGTTGGGCGTGC‑TTTGCCTGTTGCCCGGCCTGGGGGCGGCGCGCATGGCCTGGAACGATCAGGCCTGGTGGCCATTGGCGTTGTACCCGGCCATGAGCCTGATCAGCCTGTTGCTGTATTGGCa < 7:313759/149‑1 (MQ=255) cgcAACGTGCGCCTGAAGCTGCTGCTGTTCGGCGTGC‑TTTGCCTGTTGCACGGCCTGGGGGCGCCGCGCATGGCCTGGAACTCTCAGGCCTGGTGGCCATAGGCGTTGTACCCTGCCATGAGCCTGATCAGCCTGTTGCTGTATTgg > 5:71312/1‑147 (MQ=255) aaCGTGCGCCTGAAGCTGCTGCTGTTGGGCGTGC‑TTTGCCTGTTGCCCGGCCTGGGGGCGGCGCGCATGGCCTGGAACGATCAGGCCTGGTGGCCATTGGCGTTGTACCCGGCCATGAGCCTGATCAGCCTGTTGCTGTATTGGCAGGa > 1:372825/1‑149 (MQ=255) aaCGTGCGCCTGAAGCTGCTGCTGTTGGGCGTGC‑TTTGCCTGTTGCCCGGCCTGGGGGCGGCGCGCATGGCCTGGAACGATCAGGCCTGGTGGCCATTGGCGTTGTACCCGGCCATGAGCCTGATCAGCCTGTTGCTGTATTGGCAGGa > 4:193884/1‑149 (MQ=255) cgcCTGAAGCTGCTGCTGTTGGGCGTGC‑TTTGCCTGTTGCCCGGCCTGGGGGCGGCGCGCATGGCCTGGAACGATCAGGCCTGGTGGCCATTGGCGTTGTACCCGGCCATGAGCCTGATCAGCCTGTTGCTGTATTGGCAGGACAAGc < 7:112566/148‑1 (MQ=255) cgcCTGAAGCTGCTGCTGTTGGGCGTGC‑TTTGCCTGTTGCCCGGCCTGGGGGCGGCGCGCATGGCCTGGAACGATCAGGCCTGGTGGCCATTGGCGTTGTACCCGGCCATGAGCCTGATCAGCCTGTTGCTGTATTGGCAGGACAAGc < 8:205398/148‑1 (MQ=255) ccTGAAGCTGCTGCTGTTGGGCGTGCATTTGCCTGTTGCCCGGCCTGGGGGCGGCGCGCATGGCCTGGAACGATCAGGCCTGGTGGCCATTGGCGTTGTACCCGGCCATGAGCCTGATCAGCCTGTTGCTGTATTGGCAGGACAAGCgg > 1:196221/1‑149 (MQ=255) ctgctgTTGGGCGTGC‑TTTGCCTGTTGCCCGGCCTGGGGGCGGCGCGCATGGCCTGGAACGATCAGGCCTGGTtacgtgcctgccgcttgtcctgccaatacagcaacaggctgatcaggctcatggccgggtacaacgccaatggcc < 1:348140‑M1/148‑76 (MQ=255) ttGGGCGTGC‑TTTGCCTGTTGCCCGGCCTGGGGGCGGCGCGCATGGCCTGGAACGATCAGGCCTGGTGGCCATTGGCGTTGTACCCGGCCATGAGCCTGATCAGCCTGTTGCTGTATTGGCAGGACAAGCGGCAGGCACGTAaccaggc < 3:320760‑M2/149‑8 (MQ=255) ggCGTGC‑TTTGCCTGTTGCCCGGCCTGGGGGCGGCGCGCATGGCCTGGAACGATCAGGCCTGGTGGCCATTGGCGTTGTACCCGGCCATGAGCCTGATCAGCCTGTTGCTGTATTGGCAGGACAAGCGGCAGGCACGTAaccaggcct > 5:200394‑M2/1‑139 (MQ=255) gTGC‑TTTGCCTGTTGCCCGGCCTGGGGGCGGCGCGCATGGCCTGGAACGATCAGGCCTGGTtacgtgcctgccgcttgtcctgccaatacagcaacaggctgatcaggctcatggccgggtacaacgccaatggccaccaggcctgatc < 5:323948‑M1/149‑89 (MQ=255) gC‑TTTGCCTGTTGCCCGGCCTGGGGGCGGCGCGCATGGCCTGGAACGATCAGGCCTGGTGGCCATTGGCGt > 1:25159/1‑71 (MQ=255) gC‑TTTGCCTGTTGCCCGGCCTGGGGGCGGCGCGCATGGCCTGGAACGATCAGGCCTGGTGGCCATTGGCGt < 2:25159/71‑1 (MQ=255) c‑TTTGCCTGTTGCCCGGCCTGGGGGCGGCGCGCATGGCCTGGAACGATCAGGCCTGGTGGCCATTGGCGTTGTACCCGGCCATGAGCCTGATCAGCCTGTTGCTGTATTGGCAGGACAAGCGGCAGGCACGTAACCAGGCCTGGCGTa < 2:121641/148‑1 (MQ=255) ccTGTTGCCCGGCCTGGGGGCGGCGCGCATGGCCTGGAACGATCAGGCCTGGTGGCCATTGGCGTTGTACCCGGCCATGAGCCTGATCAGCCTGTTGCTGTATTGGCAGGACAAGCGGCAGGCACGTAACCAGGCCTGGCGTACAccc < 2:326503/148‑1 (MQ=255) gTTGCCCGGCCTGGGGGCGGCGCGCATGGCCTGGAACGATCAGGCCTGGTGGCCATTGGCGTTGTACCCGGCCATGAGCCTGATCAGCCTGTTGCTGTATTGGCAGGACAAGCGGCAGGCACGTAACCAGGCCTGGCGTACACCCgag > 7:34330/1‑148 (MQ=255) cccGGCCTGGGGGCGGCGCGCATGGCCTGGAACGATCAGGCCTGGTGGCCATTGGCGTTGTACCCGGCCATGAGCCTGATCAGCCTGTTGCTGTATTGGCAGGACAAGCGGCAGGCACGTACCCAGGCCTGGCGTACACCCGAGAAAGt > 5:270853/1‑149 (MQ=255) ccGGCCTGGGGGCGGCGCGCATGGCCTGGAACGATCAGGCCTGGTGGCCATTGGCGTTGTACCCGGCCATGAGCCTGATCAGCCTGTTGCTGTATTGGCAGGACAAGCGGCAGGCACGTAACCAGGCCTGGCGTACACCCGAGAAAGtg < 4:310176/149‑1 (MQ=255) ccGGCCTGGGGGCGGCGCGCATGGCCTGGAACGATCAGGCCTGGTGGCCATTGGCGTTGTACCCGGCCATGAGCCTGATCAGCCTGTTGCTGTATTGGCAGGACAAGCGGCAGGCACGTAACCAGGCCTGGCGTACACCCGAGAAAGtg > 5:361294/1‑149 (MQ=255) ccGGCCTGGGGGCGGCGCGCATGGCCTGGAACGATCAGGCCTGGTGGCCATTGGCGTTGTACCCGGCCATGAGCCTGATCAGCCTGTTGCTGTATTGGCAGGACAAGCGGCAGGCACGTAACCAGGCCTGGCGTACACCCGAGAAAGtg < 4:231067/149‑1 (MQ=255) cggcaggggggCGTCGCGCATGGACTGGAACGATCAGGCCTGGGGGCCATTGGCGTTGTACCCTGCCATGAGCCTGATCAGCCTGTTGCTGTATTGGCAGGACAAGCGGCAGGCACGTAACCAGGCCTGGCGTACACCCGAGAAAGtgc < 4:63960/143‑1 (MQ=255) gCCTGGGGGCGGCGCGCATGGCCTGGAACGATCAGGCCTGGTGGCCATTGGCGTTGTACCCGGCCATGAGCCTGATCAGCCTGTTGCTGTATTGGCAGGACAAGCGGCAGGCACGTAAGCAGGCCTGGCGTACACCCGAGAAAGtgctg < 6:71312/149‑1 (MQ=255) cTGGGGGCGGCGCGCATGGCCTGGAACGATCAGGCCTGGTGGCCATTGGCGTTGTACCCGGCCATGAGCCTGATCAGCCTGTTGCTGTATTGGCAGGACAAGCGGCAGGCACGTAACCAGGCCTGGCGTACACCCGAGAAAGTGCTGCa < 4:321616/149‑1 (MQ=255) ggggCGGCGCGCATGGCCTGGAACGATCAGGCCTGGTGGCCATTGGCGTTGTACCCGGCCATGAGCCTGATCAGCCTGTTGCTGTATTGGCAGGACAAGCGGCAGGCACGTAACCAGGCCTGGCGTACACCCGAGAAAGTGCTGCATGc > 8:291057/1‑149 (MQ=255) ggggCGGCGCGCATGGCCTGGAACGATCAGGCCTGGTGGCCAGTGGCGTTGTACCCGGCCATGAGCCTGATCAGCCTGTTGCTGTATTGGCAGGACAAGCGGCAGGCACGTAACCAGGCCTGGCGTACACCCGAGAAAGTGCTGCATGc < 6:361294/149‑1 (MQ=255) ggcggcGCGCATGGCCTGGAACGATCAGGCCTGGTGGCCATTGGCGTTGTACCCGGCCATGAGCCTGATCAGCCTGTTGCTGTATTGGCAGGACAAGCGGCAGGCACGTAACCAGGCCTGGCGTACACCCgag > 3:130056/1‑133 (MQ=255) ggcggcGCGCATGGCCTGGAACGATCAGGCCTGGTGGCCATTGGCGTTGTACCCGGCCATGAGCCTGATCAGCCTGTTGCTGTATTGGCAGGACAAGCGGCAGGCACGTAACCAGGCCTGGCGTACACCCgag < 4:130056/133‑1 (MQ=255) ggcgCGCATGGCCTGGAACGATCAGGCCTGGTGGCCATTGGCGTTGTACCCGGCCATGAGCCTGATCAGCCTGTTGCTGTATTGGCAGGACAAGCGGCAGGCACGTAACCAGGCCTGGCGTACACCCGAGAAAGTGCTGCATGCCAGTg < 2:32466/149‑1 (MQ=255) aTGGCCTGGAACGATCAGGCCTGGTGGCCATTGGCGTTGTACCCGGCCATGAGCCTGATCAGCCTGTTGCTGTATTGGCAGGACAAGCGGCAGGCACGTAACCAGGCCTGGCGTACACCCGAGAAAGTGCTGCATGCCAGTGAgctgct < 6:270853/149‑1 (MQ=255) gAACGATCAGGCCTGGTGGCCATTGGCGTTGTACCCGGCCATGAGCCTGATCAGCCTGTTGCTGTATTGGCAGGACAAGCGGCAGGCACGTAACCAGGCCTGGCGTACACCCGAGAAAGTGCTGCATGCCAGTGAGCTGCTCGGTGGtt > 2:67324/1‑149 (MQ=255) gATCAGGCCTGGTGGCCATTGGCGTTGTACCCGGCCATGAGCCTGATCAGCCTGTTGCTGTATTGGCAGGACAAGCGGCAGGCACGTAaccaggcctgatcgttccaggccatgcgcgccgcccccaggccgggcaacaggcaaagcac < 5:323948‑M2/149‑62 (MQ=255) tCAGGCCTGGTGGCCATTGGCGTTGTACCCGGCCACGAGCCTGATCAGCCTGTTGCTGTATTGGCAGGACAAGCGGCAGGCACGTAACCAGGCCTGGCGTACACCCGAGAAAGTGCTGCATGCCAGTGAGCTGCTCGGTGGTTGGCCgg > 3:224371/1‑149 (MQ=255) aGGCCTGGTtacgtgcctgccgcttgtcctgccaatacagcaacaggctgatcaggctcatggccgggtacaacgccaatggccaccaggcctgatcgttccaggccatgcgcgccgcccccaggccgggcaacaggcaaagcacgcc > 5:200394‑M1/1‑9 (MQ=255) gCCTGGTtacgtgcctgccgcttgtcctgccaatacagcaacaggctgatcaggctcatggccgggtacaacgccaatggccaccaggcctgatcgttccaggccatgcgcgccgcccccaggccgggcaacaggcaaagcacgcccaa < 3:320760‑M1/149‑143 (MQ=255) ccTGGTGGCCATTGGCGTTGTACCCGGCCATGAGCCTGATCAGCCTGTTGCTGTATTGGCAGGACAAGCGGCAGGCACGTAACCAGGCCTGGCGTACACCCGAGAAAGTGCTGCATGCCAGTGAGCTGCTCGGTGGTTGGCCGGGGgcg > 3:165640/1‑149 (MQ=255) gtggCCATTGGCGTTGTACCCGGCCATGAGCCTGATCAGCCTGTTGCTGTATTGGCAGGACAAGCGGCAGGCACGTAACCAGGCCTGGCGTACACCCGAGAAAGTGCTGCATGCCAGTGAGCTGCTCGGTGGTTGGCCGGGGGCGCTGt < 2:61099/149‑1 (MQ=255) | ACTGGTCCACGGCACATGGCTGAGGCGCTGCGTGGGCAACGGGCTGAAGGCGTGCGCAACGTGCGCCTGAAGCTGCTGCTGTTGGGCGTGC‑TTTGCCTGTTGCCCGGCCTGGGGGCGGCGCGCATGGCCTGGAACGATCAGGCCTGGTGGCCATTGGCGTTGTACCCGGCCATGAGCCTGATCAGCCTGTTGCTGTATTGGCAGGACAAGCGGCAGGCACGTAACCAGGCCTGGCGTACACCCGAGAAAGTGCTGCATGCCAGTGAGCTGCTCGGTGGTTGGCCGGGGGCGCTGT > NC_002947/3265655‑3265949 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |