New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3394199	55 (0.910)	4 (0.070)	4/256	NT	6.3%	coding (208/900 nt)	PP_2997	protein CnmA
	?	NC_002947	= 3394244	65 (1.110)					coding (163/900 nt)	PP_2997	protein CnmA

ATGCTGGGCAGCAAGGTGATGTGGCTGGCATCGCTGACACACAGGCGAAAACGCCGCTGCGCTGTGGCGGCGATGAACTGCGGCTCCCAGGCGGTCAGCCGGCGCAGCGATTCCAGCACCTCGCGGCACGGCCCTATCAGCTGATCG‑GCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGCGGCGCGGGTCACGCTGCGGCATT  >  NC_002947/3394057‑3394345                                                                                                                                               |                                                                                                                                                    aTGCTGGGCAGCTAGGTGATGTGGCTGGCATCGCTGACACACAGGCGAAAACGCCGCTGCGCTGTGGCGGCGATGAACTGCGGCTCCCAGGCGGTCAGCCGGCGCAGCGATTCCAGCACCTCGCGGCACGGCCCTATCAGCTGATCG‑gc                                                                                                                                              <  5:91162/149‑1 (MQ=255)      gggCAGCAAGGTGATGTGGCTGGCATCGCTGACACACAGGCGAAAACGCCGCTGCGCTGTGGCGGCGATGAACTGCGGCTCCCAGGCGGTCAGCCGGCGCAGCGATTCCAGCACCTCGCGGCACGGCCCTATCAGCTGATCG‑Gcgcgcg                                                                                                                                         >  7:1435/1‑149 (MQ=255)         cagcaAGGTGATGTGGCTGGCATCGCTGACACACAGGCGAAAACGCCGCTGCGCTGTGGCGGCGATGAACTGCGGCTCCCAGGCGGTCAGCCGGCGCAGCGATTCCAGCACCTCGCGGCACGGCCCTATCAGCTGATCG‑GCGCGCgggg                                                                                                                                      >  3:141253/1‑149 (MQ=255)              aGGTGATGTGGCTGGCATCGCTGACACACAGGCGAAAACGCCGCTGCGCTGTGGCGGCGATGAACTGCGGCTCCCAGGCGGTCAGCCGGCGCAGCGATTCCAGCACCTCGCGGCACGGCCCTATCAGCTGATCG‑GCGCGCGGGGTAggg                                                                                                                                 >  2:65479/1‑149 (MQ=255)               ggTGATGTGGCTGGCATCGCTGACACACAGCCGAAAACGCCGCTGCGCTGTGGCGGCGATGAACTGCGGCTCCCAGGCGGTCAGCCGGCGCAGCGATTCCAGCACCTCGCGGCACGGCCCTATCAGCTGATCG‑GCGCGCGGGGTAgggg                                                                                                                                >  5:193527/1‑149 (MQ=255)               ggTGATGTGGCGGGGATCGCTGACACAAAGGCGAAAACGCCGCTGCGCTGTGGCTGCGATGAACTGCGGCTCCCAGGCGGTCAGGCGGCGCAGCGATTCGAGCAACTCGCGTCTCGGCCCTATCATCTTATCT‑GCGCGCGGGGTAg                                                                                                                                   <  2:213620/146‑1 (MQ=255)                gTGATGTGGCTGGGATCGCTGACACACATTCGAAAACGCCGCTGCGCTGTGGCGGCGATGAACTGCGGCTCCCTGGGGGTCAGCCGGCGCAGCGATTGCAGCACCTGGCGGGACGGCCCTATCAGCTGATCG‑GCGCGCGGGGTAgggg                                                                                                                                <  8:246537/148‑1 (MQ=255)                        gctggcATCGCTGACACACAGGCGAAAACGCCGCTGCGCTGTGGCGGCGATGAACTGCGGCTCCCAGGCGGTCAGCCGGCGCAGCGATTCCAGCACCTCGCGGCACGGCCCTATCAGCTGATCG‑GCGCGCGGGGTAGGGGCCATgccgc                                                                                                                       <  6:172203/149‑1 (MQ=255)                          tggcATCGCTGACACACAGGCGAAAACGCCGCTGCGCTGTGGCGGCGATGAACTGCGGCTCCCAGGCGGTCAGCCGGCGCAGCGATTCCAGCACCTCGCGGCACGGCCCTATCAGCTGATCG‑GCGCGCGGGGTAGGGGCCATGCCGCCt                                                                                                                     >  3:108365/1‑149 (MQ=255)                            gcATCGCTGACACACAGGCGAAAACGCCGCTGCGCTGTGGCGGCGATGAACTGCGGCTCCCAGGCGGTCAGCCGGCGCAGCGATTCCAGCACCTCGCGGCACGGCCCTATCAGCTGATCG‑GCGCGCGGGGTAGGGGCCATGCCGCCTgg                                                                                                                   >  1:327898/1‑149 (MQ=255)                            gcATCGCTGACACACAGGCGAAAACGCCGCTGCGCGGTGGCGGCGATGAACTGCGGCTCCCAGGCGGTCAGCCGGCGCAGCGATTCCAGCACCTCGCGGCACGGCCCTATCAGCTGATCGCGCGCGCGGGGTAGGGGCCATGCCGCCt                                                                                                                     <  1:209650/148‑1 (MQ=255)                                     acacacAGGCGAAAACGCCGCTGCGCTGTGGCGGCGATGAACTGCGGCTCCCAGGCGGTCAGCCGGCGCAGCGATTCCAGCACCTCGCGGCACGGCCCTATCAGCTGttcgtgcgcacgccaggcggcatggcccctaccccgcgcgcc                                                                                                           >  2:3217‑M1/1‑107 (MQ=255)                                     acacacAGGCGAAAACGCCGCTGCGCTGTGGCGGCGATGAACTGCGGCTCCCAGGCGGTCAGCCGGCGCAGCGATTCCAGCACCTCGCGGCACGGCCCTATCAGCTGATCG‑GCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCAc                                                                                                          <  8:280861/149‑1 (MQ=255)                                       acacaGGCGAAAACGCCGCTGCGCTGTGGCGGCGATGAACTGCGGCTCCCAGGCGGTCAGCCGGCGCAGCGATTCCAGCACCTCGCGGCCCGGCCCTATCAGCTGATCG‑GCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACg                                                                                                         >  4:285357/1‑148 (MQ=255)                                         acaGGCGAAAACGCCGCTGCGCTGTGGCGGCGATGAACTGCGGCTCCCAGGCGGTCAGCCGGCGCAGCGATTCCAGCACCTCGCGGCACGGCCCTATCAGCTGATCG‑GCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGaa                                                                                                       >  4:238954/1‑148 (MQ=255)                                         acaGGCGAAAACGCCGCTGCGCTGTGGCGGCGATGAACTGCGGCTCCCAGGCGGTCAGCCGGCGCAGCGATTCCAGCACCTCGCGGCACGGCCCTATCAGCTGATCG‑GCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGaa                                                                                                       >  1:240440/1‑148 (MQ=255)                                         acaGGCGAAAACGCCGCTGCGCTGTGGCGGCGATGAACTGCGGCTCCCAGGCGGTCAGCCGGCGCAGCGATTCCAGCACCTCGCGGCACGGCCCTATCAGCTGATCG‑GCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGaa                                                                                                       >  6:333623/1‑148 (MQ=255)                                           aGGCGAAAACGCCGCTGCGCTGTGGCGGCGATGAACTGCGGCTCCCAGGCGGTCAGCCGGCGCAGCGATTCCAGCACCTCGCGGCACGGCCCTATCAGCTGATCG‑GCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAAcag                                                                                                    <  7:218409‑M2/149‑4 (MQ=255)                                            ggCGAAAACGCCGCTGCGCTGTGGCGGCGATGAACTGCGGCTCCCAGGCGGTCAGCCGGCGCAGCGATTCCAGCACCTCGCGGCACGGCCCTATCAGCTGttcgtgcgcacgccaggcggcatggcccctaccccgcgcgccgatcagc                                                                                                    <  1:3217‑M1/149‑50 (MQ=255)                                             gCGAAAACGCCGCTGCGCTGTGGCGGCGATGAACTGCGGCTCCCAGGCGGTCAGCCGGCGCAGCGATTCCAGCACCTCGCGGCACGGCCCTATCAGCTGttcgtgcgcacgccaggcggcatggcccctaccccgcgcgccgatcagct                                                                                                   <  8:64703‑M1/149‑51 (MQ=255)                                               gAAAACGCCGCTGCGCTGTGGCGGCGATGAACTGCGGCTCCCAGGCGGTCAGCCGGCGCAGCGATTCCAGCACCTCGCGGCACGGCCCTATCAGCTGATCG‑GCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCggg                                                                                                <  2:265776/149‑1 (MQ=255)                                                   aCGCCGCTGCGCTGTGGCGGCGATGAACTGCGGCTCCCAGGCGGTCAGCCGGCGCAGCGATTCCAGCACCTCGCGGCACGGCCCTATCAGCTGttcgtgcgcacgccaggcggcatggcccctaccccgcgcgccgatcagctgatagg                                                                                             <  2:366335‑M1/149‑57 (MQ=255)                                                       cgctgcgctgTGGCGGCGATGAACTGCGGCTCCCAGGCGGTCAGCCGGCGCAGCGATTCCAGCACCTCGCGGCACGGCCCTATCAGCTGATCG‑GCGCGCTGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCaa                                                                                        <  6:193527/149‑1 (MQ=255)                                                          tgcgctgTGGCGGCGATGAACTGCGGCTCCCAGGCGGTCAGCCGGCGCAGCGATTCCAGCACCTCGCGGCACGGCCCTATCAGCTGATCG‑GCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTg                                                                                     >  4:284580/1‑149 (MQ=255)                                                              ctgTGGCGGCGATGAACTGCGGCTCCCAGGCGGTCAGCCGGCGCAGCGATTCCAGCACCTCGCGGCACGGCCCTATCAGCTGATCG‑GCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTcg                                                                                 >  1:214504/1‑149 (MQ=255)                                                               tgtgGCGGCGATGAACTGCGGCTCCCAGGCGGTCAGCCGGCGCAGCGATTCCAGCACCTCGCGGCACGGCCCTATCAGCTGATCG‑GCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTcgc                                                                                <  4:141253/149‑1 (MQ=255)                                                                   gcggcgATGAACTGCGGCTCCCAGGCGGTCAGCCGGCGCAGCGATTCCAGCACCTCGCGGCACGGCCCTATCAGCTGATCG‑GCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAg                                                                            >  5:143358/1‑149 (MQ=255)                                                                    cggcgATGAACTGCGGCTCCCAGGCGGTCAGCCGGCGCAGCGATTCCAGCACCTCGCGGCACGGCCCTATCAGCTGATCG‑GCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAgg                                                                           <  8:1435/149‑1 (MQ=255)                                                                    cggcgATGAACTGCGGCTCCCAGGCGGTCAGCCGGCGCAGCGATTCCAGCACCTCGCGGCACGGCCCTATCAGCTGATCG‑GCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAgg                                                                           >  2:153767/1‑149 (MQ=255)                                                                     ggcgATGAACTGCGGCTCCCAGGCGGTCAGCCGGCGCAGCGATTCCAGCACCTCGCGGCACGGCCCTATCAGCTGATCG‑GCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGgc                                                                          <  2:327898/149‑1 (MQ=255)                                                                        gATGAACTGCGGCTCCCAGGCGGTCAGCCGGCGCAGCGATTCCAGCACCTCGCGGCACGGCCCTATCAGCTGATCG‑GCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGgcgcg                                                                       >  4:88987/1‑149 (MQ=255)                                                                           gAACTGCGGCTCCCAGGCGGTCAGCCGGCGCAGCGATTCCAGCACCTCGCGGCACGGCCCTATCAGCTGATCG‑GCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCgcca                                                                    >  6:309277/1‑149 (MQ=255)                                                                            aaCTGCGGCTCCCAGGCGGTCAGCCGGCGCAGCGATTCCAGCACCTCGCGGCACGGCCCTATCAGCTGATCG‑GCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCgccag                                                                   <  1:153767/149‑1 (MQ=255)                                                                            aaCTGCGGCTCCCAGGCGGTCAGCCGGCGCAGCGATTCCAGCACCTCGCGGCACGGCCCTATCAGCTGATCG‑GCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCgcca                                                                    <  2:240440/148‑1 (MQ=255)                                                                                  ggCTCCCAGGCGGTCAGCCGGCGCAGCGATTCCAGCACCTCGCGGCACGGCCCTATCAGCTGATCG‑GCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGAt                                                             >  1:144024/1‑149 (MQ=255)                                                                                    cTCCCAGGCGGTCAGCCGGCGCAGCGATTCCAGCACCTCGCGGCACGGCCCTATCAGCTGATCG‑GCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGc                                                           <  2:144024/149‑1 (MQ=255)                                                                                            cGGTCAGCCGGCGCAGCGATTCCAGCACCTCGCGGCACGGCCCTATCAGCTGATGG‑GCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTc                                                   <  4:108365/149‑1 (MQ=255)                                                                                             ggTCAGCCGGCGCAGCGATTCCAGCACCTCGCGGCACGGCCCTATCAGCTGATCG‑GCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCg                                                  >  6:18483/1‑149 (MQ=255)                                                                                              gTCAGCCGGCGCAGCGATTCCAGCACCTCGCGGCACGGCCCTATCAGCTGATCG‑GCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCgg                                                 <  5:310067/149‑1 (MQ=255)                                                                                               tCAGCCGGCGCAGCGATTCCAGCACCTCGCGGCACGGCCCTATCAGCTGATCG‑GCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCggc                                                >  7:193731/1‑149 (MQ=255)                                                                                               tCAGCCGGCGCAGCGATTCCAGCACCTCGCGGCACGGCCCTATCAGCTGATCG‑GCGCGCGGAGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCggc                                                <  3:300907/149‑1 (MQ=255)                                                                                                   ccGGCGCAGCGATTCCAGCACCTCGCGGCACGGCCCTATCAGCTGATCG‑GCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCggctggc                                            <  5:18483/149‑1 (MQ=255)                                                                                                         cAGCGATTCCAGCACCTCGCGGCACGGCCCTATCAGCTGATCG‑GCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGcc                                      <  5:309277/149‑1 (MQ=255)                                                                                                          aGCGATTCCAGCACCTCGCGGCACGGCCCTATCAGCTGATCG‑GCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGCACAGAGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGccc                                     >  5:250440/1‑149 (MQ=255)                                                                                                              aTTCCAGCACCTCGCGGCACGGCCCTATCAGCTGATCG‑GCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGc                                 >  6:47831/1‑149 (MQ=255)                                                                                                               ttCCAGCACCTCGCGGCACGGCCCTATCAGCTGATCG‑GCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCt                                <  6:143358/149‑1 (MQ=255)                                                                                                                  cAGCACCTCGCGGCACGGCCCTATCAGCTGATCG‑GCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGctct                                         >  8:111855/1‑137 (MQ=255)                                                                                                                  cAGCACCTCGCGGCACGGCCCTATCAGCTGATCG‑GCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGctct                                         <  7:111855/137‑1 (MQ=255)                                                                                                                   aGCACCTCGCGGCACGGCCCTATCAGCTGATCG‑GCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAAtt                                                                                      <  4:201457/91‑1 (MQ=255)                                                                                                                   aGCACCTCGCGGCACGGCCCTATCAGCTGATCG‑GCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAAtt                                                                                      >  3:201457/1‑91 (MQ=255)                                                                                                                   aGCACCTCGCGGCACGGCCCTATCAGCTGATCG‑GCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTc                            <  5:333623/149‑1 (MQ=255)                                                                                                                      aCCTCGCGGCACGGCCCTATCAGCTGATCG‑GCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTcggc                         <  1:65479/149‑1 (MQ=255)                                                                                                                        cTCGCGGCACGGCCCTATCAGCTGATCG‑GCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTcggcgg                       >  7:224411/1‑149 (MQ=255)                                                                                                                                  ggCCCTATCAGCTGATCG‑GCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGCGGCGCGGGTCAc             <  5:23155/149‑1 (MQ=255)                                                                                                                                    cccTATCAGCTGATCG‑GCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGtt                             <  5:11978/131‑1 (MQ=255)                                                                                                                                    cccTATCAGCTGATCG‑GCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGtt                             >  6:11978/1‑131 (MQ=255)                                                                                                                                    cccTATCAGCTGATCG‑GCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGCGGCGCGGGTCACGc           >  7:230603/1‑149 (MQ=255)                                                                                                                                    cccTATCAGCTGATCG‑GCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGCGGCGCGGGTCACGc           >  2:253110/1‑149 (MQ=255)                                                                                                                                     ccTATCAGCTGATCG‑GCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAAcagctgatagggccgtgccgcgaggtgctggaatcgctgcgccggctgaccgcctgggagccgcagttcatcgccgccacagcgcagcggcgt          <  2:366335‑M2/149‑94 (MQ=255)                                                                                                                                      cTATCAGCTGATCG‑GCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGCGGCGCGGGTCACGCTg         >  6:142974/1‑149 (MQ=255)                                                                                                                                         tCAGCTGATCG‑GCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGCGGCGCGGGTCACGCTGCgg      >  3:130035/1‑149 (MQ=255)                                                                                                                                           aGCTGATCG‑GCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAAcagctgatagggccgtgccgcgaggtgctggaatcgctgcgccggctgaccgcctgggagccgcagttcatcgccgccacagcgcagcggcgttttcgc    <  8:64703‑M2/149‑100 (MQ=255)                                                                                                                                            gCTGATCG‑GCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAAcagctgatagggccgtgccgcgaggtgctggaatcgctgcgccggctgaccgcctgggagccgcagttcatcgccgccacagcgcagcggcgttttcgcc   <  1:3217‑M2/149‑101 (MQ=255)                                                                                                                                            gCTGATCG‑GCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGCGGCGCGGGTCACGCTGCGGCAt   >  2:50101/1‑149 (MQ=255)                                                                                                                                             cTGttcgtgcgcacgccaggcggcatggcccctaccccgcgcgccgatcagctgatagggccgtgccgcgaggtgctggaatcgctgcgccggctgaccgcctgggagccgcagttcatcgccgccacagcgcagcggcgttttcgcct   <  7:218409‑M1/149‑147 (MQ=255)                                                                                                                                             cTGATCG‑GCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGCGGCGCGGGTCACGCTGCGGCAtt  <  8:193731/149‑1 (MQ=255)                                                                                                                                             cTGATCG‑GCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGCGGCGCGGGTCACGCTGCGGCAtt  <  8:230603/149‑1 (MQ=255)                                                                                                                                             cTGATCG‑GCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGCGGCGCGGGTCACGCTGCGGCAtt  <  2:214504/149‑1 (MQ=255)                                                                                                                                              tGATCG‑GCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCACTGCCCCAGCTGTTCGGCGGCGCGGGTCACGCTGCGGCAtt  >  8:344125/1‑148 (MQ=255)                                                                                                                                               |                                                                                                                                                    ATGCTGGGCAGCAAGGTGATGTGGCTGGCATCGCTGACACACAGGCGAAAACGCCGCTGCGCTGTGGCGGCGATGAACTGCGGCTCCCAGGCGGTCAGCCGGCGCAGCGATTCCAGCACCTCGCGGCACGGCCCTATCAGCTGATCG‑GCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGCGGCGCGGGTCACGCTGCGGCATT  >  NC_002947/3394057‑3394345

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.