New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3604549	57 (0.950)	4 (0.070)	4/252	NT	6.9%	coding (105/900 nt)	PP_3179	LysR family transcriptional regulator
	?	NC_002947	= 3604617	54 (0.940)					coding (37/900 nt)	PP_3179	LysR family transcriptional regulator

GCGTACTCGATCCCTTGTTCCAGTTCAGCAAGCGTGCGGTAGGCGGTGTCGAGAAACGCTGCACCCGCTGCGGTCAGGCGCACCCCGCGCTTGTTGCGCAGAAGAAGGCCGAAAC‑‑CGAGCTTTTCCTCGAGCCGGTTGATCGCCTGGCTCAGCGGCGGTTGCGCCATGTGCAGGCGCTGTGCGGCCTTGTGAAAGTGCAGCTCTTCGGCCACGGCGATGAACTGCCTGAGCAAGCGTGTTTCGATCATCCAGCATTCCTGCAGCGTGGCGACTCGGCGGTGATATCCATGGG  >  NC_002947/3604406‑3604697                                                                                                                                                  |                                                                                                                                                     gcgTACTCGATCCCTTGTTCCAGTTCAGCAAGCGTGCGGTAGGCGGTGTCGAGAAAGGCTGCACCCGCTGCGGTCAGGCGCACCCCGCGCTTGTTGCGCAGAAGAAGGCCGAAAC‑‑CGAGCTTTTCCTCGAGCCGGTTGATCGCCTGGCt                                                                                                                                                 >  1:292935/1‑149 (MQ=255)      cTCGATCCCTTGTTCCAGTTCAGCAAGCGTGCGGTAGGCGGTGTCGAGAAACGCTGCACCCGCTGCGGTCAGGCGCACCCCGCGCTTGTTGCGCAGAAGAAGGCCGAAAC‑‑CGAGCTTGTCCTCGAGCCGGTTGATCGCCTGGCTCAgcg                                                                                                                                            >  5:7164/1‑149 (MQ=255)         gATCCCTTGTTCCAGTTCAGCAAGCGTGCGGTAGGCGGTGTCGAGAAACGCTGCACCCGCTGCGGTCAGGCGCACCCCGCGCTTGTTGCGCAGAAGAAGGCCGAAAC‑‑CGAGCTTTTCCTCAAGCCGGTTGATCGCCTGGCTCAgcggc                                                                                                                                          <  1:208376/148‑1 (MQ=255)             ccTTGTTCCAGTTCAGCAAGCGTGCGGTAGGCGGTGTCGAGAAACGCTGCACCCGCTGCGGTCAGGCGCACCCCGCGCTTGTTGCGCAGAAGAAGGCCGAAAC‑‑CGAGCTTTTCCTCGAGCCGGTTGATCGCCTGGCTCAGCGGCGGtt                                                                                                                                      <  1:355540/148‑1 (MQ=255)             ccTTGTTCCAGTTCAGCAAGCGTGCGGTAGGCGGTGTCGAGAAACGCTGCACCCGCTGCGGTCAGGCGCACCCCGCGCTTGTTGCGCAGAAGAAGGCCGAAAC‑‑CGAGCTTTTCCTCGAGCCGGTTGATCGCCTGGCTCAGCGGCGGTTg                                                                                                                                     >  3:183933/1‑149 (MQ=255)              cTTGTTCCAGTTCAGCAAGCGTGCGGTAGGCGGTGTCGAGAAACGCTGCACCCGCTGCGGTCAGGCGCACCCCGCGCTTGTTGCGCAGAAGAAGGCCGAAAC‑‑CGAGCTTTTCCTCGAGCCGGTTGATCGCCTGGCTCAGCGGCGGTTgc                                                                                                                                    >  6:361230/1‑149 (MQ=255)              cTTGTTCCAGTTCAGCAAGCGTGCGGTAGGCGGTGTCGAGAAACGCTGCACCCGCTGCGGTCAGGCGCACCCCGCGCTTGTTGCGCAGAAGAAGGCCGAAAC‑‑CGAGCTTTTCCTCGAGCCGGTTGATCGCCTGGCTCAGCGGCGGTTgc                                                                                                                                    <  2:358959/149‑1 (MQ=255)              cTTGTTCCAGTTCAGCAAGCGTGCGGTAGGCGGTGTCGAGAAACGCTGCACCCGCTGCGGTCAGGCGCACCCCGCGCTTGTTGCGCAGAAGAAGGCCGAAAC‑‑CGAGCTTTTCCTCGAGCCGGTTGATCGCCTGGCTCAGCGGCGGTTgc                                                                                                                                    >  2:334749/1‑149 (MQ=255)                    ccAGTTCAGCAAGCGTGCGGTAGGCGGTGTCGAGAAACGCTGCACCCGCTGCGGTCAGGCGCACCCCGCGCTTGTTGCGCAGAAGAAGGCCGAAAC‑‑CGAGCTTTTCCTCGAGCCGGTTGATCGCCTGGCTCAGCGGCGGTTGCGCCAt                                                                                                                               <  4:183933/148‑1 (MQ=255)                      aGTTCAGCAAGCGTGCGGTAGGCGGTGTCGAGAAACGCTGCACCCGCTGCGGTCAGGCGCACCCCGCGCTTGTTGCGCAGAAGAAGGCCGAAAC‑‑CGAGCTTTTCCTCGAGCCGGTTGATCGCCTGGCTCAGCGGCGGTTGCGCCAtgtg                                                                                                                            <  1:334749/149‑1 (MQ=255)                       gTTCAGCAAGCGTGCGGTAGGCGGTGTCGAGAAACGCTGCACCCGCTGCGGTCAGGCGCACCCCGCGCTTGTTGCGCAGAAGAAGGCCGAAAC‑‑CGAGCTTTTCCTCGAGCCGGTTGATCGCCTGGCTCAGCGGCGGTTGCGCCATGTGc                                                                                                                           <  5:28699/149‑1 (MQ=255)                          cAGCAAGCGTGCGGTAGGCGGTGTCGAGAAACGCTGCACCCGCTGCGGTCAGGCTCACCCCGCGCTTGTTGCGCAGAAGAAGGCCGAAAC‑‑CGAGCTTTTCCTCGAGCCGGTTGATCGCCTGGCTCAGCGGCGGTTGCGCCATGTGCAg                                                                                                                         <  4:55305/148‑1 (MQ=255)                          cAGCAAGCGTGCGGTAGGCGGTGTCGAGAAACGCTGCACCCGCTGCGGTCAGGCGCACCCCGCGCTTGTTGCGCAGAAGAAGGCCGAAAC‑‑CGAGCTTTTCCTCGAGCCGGTTGATCGCCTGGCTCAGCGGCGGTTGCGCCATGTGCAg                                                                                                                         <  2:252513/148‑1 (MQ=255)                           aGCAAGCGTGCGGTAGGCGGTGTCGAGAAACGCTGCACCCGCTGCGGTCAGGCGCACCCCGCGCTTGTTGCGCAGAAGAAGGCCGAAAC‑‑CGAGCTTTTCCTCGAGCCGGTTGATCGCCTGGCTCAGCGGCGGTTGCGCCATGTGCAGgc                                                                                                                       >  2:316818/1‑149 (MQ=255)                           aGCAAGCGTGCGGTAGGCGGTGTCGAGAAACGCTGCACCCGCTGCGGTCAGGCGCACCCCGCGCTTGTTGCGCAGAAGAAGGCCGAAAC‑‑CGAGCTTTTCCTCGAGCCGGTTGATCGCCTGGCTCAGCGGCGGTTGCGCCATGTGCAGgc                                                                                                                       <  3:240994/149‑1 (MQ=255)                           aGCAAGCGTGCGGTAGGCGGTGTCGAGAAACGCTGCACCCGCTGCGGTCAGGCGCACCCCGCGCTTGTTGCCCACAAGAAGGCGCAACC‑‑CGAGATTTTCATCAAGCCGGTTCAGCGCCTGGCTCACCGGCGGTTGCGCAAGGTGAAGgc                                                                                                                       >  8:318606/1‑149 (MQ=255)                                     cGGTAGGCGGTGTCGAGAAACGCTGCACCCGCTGCGGTCAGGCGCACCCCGCGCTTGTTGCGCAGAAGAAGGCCGAAAC‑‑CGAGCTTTTCCTCGAGCCGGTTGATCGCCTGGCTCAGCGGTGGTTGCGCCATGTGCAGGCGCTGTGCgg                                                                                                              <  1:216314/148‑1 (MQ=255)                                       gTAGGCGGTGTCGAGAAACGCTGCACCCGCTGCGGTCAGGCGCACCCCGCGCTTGTTGCGCAGAAGAAGGCCGAAAC‑‑CGAGCTTTTCCTCGAGCCGGTTGATCGCCTGGCTCAGCGGCGGTTGCGCCATGTGCAGGCGCTGTGCGGCCt                                                                                                           >  1:173328/1‑149 (MQ=255)                                          ggCGGTGTCGAGAAACGCTGCACCCGCTGCGGTCAGGCGCACCCCGCGCTTGTTGCGCAGAAGAAGGCCGAAAC‑‑CGAGCTTTTCCTCGAGCCGGTTGATCGCCTGGCTCAGCGGCGGTTGCGCCATGTGCAGGCGCTGTGCGGCCTtgt                                                                                                        >  1:306371/1‑149 (MQ=255)                                           gCGGTGTCGAGAAACGCTGCACCCGCTGCGGTCAGGCGCACCCCGCGCTTGTTGCGCAGAAGAAGGCCGAACC‑‑CGAGCTTTTCCTCGAGCCGGTTGATCGCCTGGCTCAGCGGCGGTTGCGCCATGTGCAGGCGCTGTGCGGCCTtgtg                                                                                                       <  3:50877/149‑1 (MQ=255)                                            cGGTGTCGAGAAACGCTGCACCCGCTGCGGTCAGGCGCACCCCGCGCTTGTTGCGCAGAAGAAGGCCGAAAC‑‑CGAGCTTTTCCTCGAGCCGGTTGATCGCCTGGCTCAGCGGCGGTTGCGCCATGTGCAGGCGCTGTGCGGCCTTGTGa                                                                                                      <  4:255672/149‑1 (MQ=255)                                              gtgtCGAGAAACGCTGCACCCGCTGCGGTCAGGCGCACCCCGCGCTTGTTGCGCAGAAGAAGGCCGAAAC‑‑CGAGCTTTTCCTCGAGCCGGTTGATCGCCTGGCTCAGCGGCGGTTGCGCCATGTGCAGGCGCTGTGCGGCCTTGTGaaa                                                                                                    <  4:37890/149‑1 (MQ=255)                                               tgtCGAGAAACGCTGCACCCGCTGCGGTCAGGCGCACCCCGCGCTTGTTGCGCAGAAGAAGGCCGAAAC‑‑CGAGCTTTTCCTCGAGCCGGTTGATCGCCTGGCTCAGCGGCGGTTGCGCCATGTGCAGGCGCTGTGCGGCCTTGTGAAAg                                                                                                   <  5:361230/149‑1 (MQ=255)                                                gtCGAGAAACGCTGCACCCGCTGCGGTCAGGCGCACCCCGCGCTTGTTGCGCAGAAGAAGGCCGAAACTGAGAGCTTTTCCTCGAGCCCGTTTATCGCCTGGCTAAGCGGCCGTTGCCCCATGTGCACGCGCTGTGCGGCCTTTTTaaa                                                                                                    >  1:306952/1‑149 (MQ=255)                                                   gagaAACGCTGCACCCGCTGCGGTCAGGCGCACCCCGCGCTTGTTGCGCAGAAGAAGGCCGAAAC‑‑CGAGCTTTTCCTCGAGCCGGTTGATCGCCgtggccgaagagctgcactttcacaaggccgcacagcgcctgcacatggcgcaac                                                                                               >  2:45848‑M1/1‑94 (MQ=255)                                                     gaAACGCTGCACCCGCTGCGGTCAGGCGCACCCCGCGCTTGTTGCGCAGAAGAAGGCCGAAAC‑‑CGAGCTTTTCCTCGAGCCGGTTGATCGCCTGGCTCAGCGGCGGTTGCGCCATGTGCAGGCGCTGTGCGGCCTTGTGAAAGTGCAGc                                                                                             >  2:255974/1‑149 (MQ=255)                                                          gCTGCACCCGCTGCGGTCAGGCGCACCCCGCGCTTGTTGCGCAGAAGAAGGCCGAAAC‑‑CGAGCTTTTCCTCGAGCCGGTTGATCGCCTGGCTCAGCGGCGGTTGCGCCATGTGCAGGCGCTGTGCGGCCTTGTGAAAGTGCAGCTCTTc                                                                                        >  6:327863/1‑149 (MQ=255)                                                           cggCACCCGCTGCGGTCAGGCGCACCCCGCGCTTGTTGCGCAGAAGAAGGCCGAAAC‑‑CGAGCTTTTCCTCGAGCCGGTTGATCGCCTGGCTCAGCGGCGGTTGCGCCATGTGCAGGCGCTGTGCGGCCTTGTGAAAGTGCAGCTCTTCg                                                                                       <  7:318606/147‑1 (MQ=255)                                                            tGCACCCGCTGCGGTCAGGCGCACCCCGCGCTTGTTGCGCAGAAGAAGGCCGAAAC‑‑CGAGCTTTTCCTCGAGCCGGTTGATCGCCgtggccgaagagctgcactttcacaaggccgcacagcgcctgcacatggcgcaaccgccgct                                                                                        >  6:150694‑M1/1‑85 (MQ=255)                                                                 ccGCTGCGGTCAGGCGCACCCCGCGCTTGTTGCGCAGAAGAAGGCCGAAAC‑‑CGAGCTTTTCCTCGAGCCGGTTGATCGCCTGGCTCAGCGGCGGTTGCGCCATGTGCAGGCGCTGTGCGGCCTTGTGAAAGTGCAGCTCTTCGGCCAc                                                                                  <  1:221019/148‑1 (MQ=255)                                                                 ccGCTGCGGTCAGGCGCACCCCGCGCTTGTTGCGCAGAAGAAGGCCGAAAC‑‑CGAGCTTTTCCTCGAGCCGGTTGATCGCCTGGCTCAGCGGCGGTTGCGCCATGTGCAGGCGCTGTGCGGCCTTGTGAAAGTGCAGCTCTTCGGCCAc                                                                                  >  2:221019/1‑148 (MQ=255)                                                                 ccGCTGCGGTCAGGCGCACCCCGCGCTTGTTGCGCAGAAGAAGGCCGAAAC‑‑CGAGCTTTTCCTCGAGCCGGGTGATCGCCTGGCTCAGCGGCGGTTGCGCCATGTGCAGGCGCTGTGCGGCCTTGTGAAAGTGCAGCTCTTCGGCCACg                                                                                 <  8:174172‑M2/149‑2 (MQ=255)                                                                 ccGCTGCGGTCAGGCGCACCCCGCGCTTGTTGCGCAGAAGAAGGCCGAAAC‑‑CGAGCTTATCCTCGAGCCGGTTGATCGCCTGGCTCAGCGGCGGTTGCGCCATGTGCAGGCGCTGTGCGGCCTTGTGAAAGTGCAGCTCTTCGGCCACg                                                                                 >  6:7164‑M2/1‑148 (MQ=255)                                                                   gCTGCGGTCAGGCGCACCCCGCGCTTGTTGCGCAGAAGAAGGCCGAAAC‑‑CGAGCTTTTCCTCGAGCCGGTTGATCGCCTGGCTCAGCGGCGGTTGCGCCATGTGCAGGCGCTGTGCGGCCTTGTGAAAGTGCAGCTCTTCGGCCACggc                                                                               <  3:126877‑M2/149‑4 (MQ=255)                                                                       cGGTCAGGCGCACCCCGCGCTTGTTGCGCAGAAGAAGGCCGAAAC‑‑CGAGCTTTTCCTCGAGCCGGTTGATCGCCgtggccgaagagctgcactttcacaaggccgcacagcgcctgcacatggcgcaaccgccgctgagccaggcgatc                                                                           <  5:150694‑M1/149‑76 (MQ=255)                                                                       cGGTCAGGCGCACCCCGCGCTTGTTGCGCAGAAGAAGGCCGAAAC‑‑CGAGCTTTTCCTCGAGCCGGTTGATCGCCTGGCTCAGCGGCGGTTGCGCCATGTGCAGGCGCTGTGCGGCCTTGTGAAAGTGCAGCTCTTCGGCCACggcgat                                                                            >  1:255974‑M2/1‑142 (MQ=255)                                                                       cGGTCAGGCGCACCCCGCGCTTGTTGCGCAGAAGAAGGCCGAAAC‑‑CGAGCTTTTCCTCGAGCCGGTTGATCGCCTGGCTCAGCGGCGGTTGCGCCATGTGCAGGCGCTGTGCGGCCTTGTGAAAGTGCAGCTCTTCGGCCACggcgat                                                                            >  2:92036‑M2/1‑142 (MQ=255)                                                                          tCAGGCGCACCCCGCGCTTGTTGCGCAGAAGAAGGCCGAAAC‑‑CGAGCTTTTCCTCGAGCCGGTTGATCGCCgtggccgaagagctgcactttcacaaggccgcacagcgcctgcacatggcgcaaccgccgctgagccaggcgatcaac                                                                        <  1:45848‑M1/149‑79 (MQ=255)                                                                               cgcACCCCGCGCTTGTTGCGCAGAAGAAGGCCGAAAC‑‑CGAGCTTTTCCTCGAGCCGGTTGATCGCCTGGCTCAGCGGCGGTTGCGCCATGTGCAGGCGCTGTGCGGCCTTGTGAAAGTGCAGCTCTTCGGCCACggcgat                                                                            <  5:106396‑M2/140‑7 (MQ=255)                                                                               cgcACCCCGCGCTTGTTGCGCAGAAGAAGGCCGAAAC‑‑CGAGCTTTTCCTCGAGCCGGTTGATCGCCTGGCTCAGCGGCGGTTGCGCCATGTGCAGGCGCTGTGCGGCCTTGTGAAAGTGCAGCTCTTCGGCCACggcgat                                                                            >  6:106396‑M2/1‑134 (MQ=255)                                                                                       gcgcTTGTTGCGCAGAAGAAGGCCGAAAC‑‑CGAGCTTTTCCTCGAGCCGGTTGATCGCCTGGCTCAGCGGCGGTTGCGCCATGTGCAGGCGCTGTGCGGCCTTGTGAAAGTGCAGCTCTTCGGCCACGGCGATGAACTGCCTGAGCAAGc                                                           >  7:187116/1‑149 (MQ=255)                                                                                             gttgCGCAGAAGAAGGCCGAACC‑‑CGAGCTTTTCCTCGAGCCGGTTGATCGCCTGGCTCAGCGGCGGTTGCGCCATGTGCAGGCGCTGTGCGGCCTTGTGAAAGTGCAGCTCTTCGGCCACGGCGATGAACTGCCTGAGCAAGCGTGttt                                                     >  3:195670/1‑149 (MQ=255)                                                                                             gttgCGCAGAAGAAGGCCGAAAC‑‑CGAGCTTTTCCTCGAGCCGGTTGATCGCCTGGCTCAGCGGCGGTTGCGCCATGTGCAGGCGCTGTGCGGCCTTGTGAAAGTGCAGCTCTTCGGCCACGGCGATGAACTGCCTGAGCAAGCGTGttt                                                     >  2:104889/1‑149 (MQ=255)                                                                                                 cgcAGAAGAAGGCCGAAAC‑‑CGAGCTTTTCCTCGAGCCGGTTGATCGCCTGGCTCAGCGGCGGTTGCGCCATGTGCAGGCGCTGTGCGGCCTTGTGAAAGTGCAGCTCTTCGGCCACGGCGATGAACTGCCTGAGCAAGCGTGTTTCGat                                                 >  2:70233/1‑149 (MQ=255)                                                                                                  gcAGAAGAAGGCCGAAAC‑‑CGAGCTTTTCCTCGAGCCGGTTGATCGCCTGGCTCAGCGGCGGTTGCGCCATGTGCAGGCGCTGTGCGGCCTTGTGAAAGTGCAGCTCTTCGGCCACGGCGATGAACTGCCTGAGCAAGCGTGTTTCGat                                                 >  5:149242/1‑148 (MQ=255)                                                                                                     gaagaaGGCCGAAAC‑‑CGAGCTTTTCCTCGAGCCGGTTGATCGCCTGGCTCAGCGGCGGTTGCGCCATGTGCAGGCGCTGTGCGGCCTTGTGAAAGTGCAGCTCTTCGGCCACGGCGATGAACTGCCTGAGCAAGCGTGTTTCGatcatc                                             <  4:147893/149‑1 (MQ=255)                                                                                                     gaagaaGGCCGAAAC‑‑CGAGCTTTTCCTCGAGCCGGTTGATCGCCTGGCTCAGCGGCGGTTGCGCCATGTGCAGGCGCTGTGCGGCCTTGTGAAAGTGCAGCTCTTCGGCCACGGCGATGAACTGCCTGAGCAAGCGTGTTTCGatcatc                                             <  8:187116/149‑1 (MQ=255)                                                                                                             ccGAAAC‑‑CGAGCTTTTCCTCGAGCCGGTTGATCGCCTGGCTCAGCGGCGGTTGCGCCATGTGCAGGCGCTGTGCGGCCTTGTGAAAGTGCAGCTCTTCGGCCACGGCGATGAACTGCCTGAGCAAGCGTGTTTCGATCATCCAGCATTc                                     >  7:204884/1‑149 (MQ=255)                                                                                                               gAAAC‑‑CGAGCTTTTCCTCGAGCCGGTTGATCGCCTGGCTCAGCGGCGGTTGCGCCATGTGCAGGCGCTGTGCGGCCTTGTGAAAGTGCAGCTCTTCGGCCACGGCGATGAACTGCCTGAGCAAGCGTGTTTCGATCATCCAGCATTCCt                                   >  7:74197/1‑149 (MQ=255)                                                                                                                aaaC‑‑CGAGCTTTTCCTCGAGCCGGTTGATCGCCTGGCTCAGCGGCGGTTGCGCCATGTGCAGGCGCTGTGCGGCCTTGTGAAAGTGCAGCTCTTCGGCCACGGCGATGAACTGCCTGAGCAAGCGTGTTTCGATCATCCAGCATTCCTg                                  <  8:204884/149‑1 (MQ=255)                                                                                                                      cGAGCTTTTCCTCGAGCCGGTTGATCGCCTGGCTCAGCGGCGGTTGCGCCATGTGCAGGCGCTGTGCGGCCTTGTGAAAGTGCAGCTCTTCGGCCACGGCGATGAACTGCCTGAGCAAGc                                                           <  7:89529/120‑1 (MQ=255)                                                                                                                      cGAGCTTTTCCTCGAGCCGGTTGATCGCCTGGCTCAGCGGCGGTTGCGCCATGTGCAGGCGCTGTGCGGCCTTGTGAAAGTGCAGCTCTTCGGCCACGGCGATGAACTGCCTGAGCAAGc                                                           >  8:89529/1‑120 (MQ=255)                                                                                                                      cGAGCTTTTCCTCGAGCCGGTTGATCGCCTGGCTCAGCGGCGGTTGCGCCATGTGCAGGCGCTGTGCGGCCTTGTGAAAGTGCAGCTCTTCGGCCACGGCGATGAACTGCCTGAGCAAGCGTGTTTCGATCATCCAGCATTCCTGCAGc                              >  8:160588/1‑149 (MQ=255)                                                                                                                      cGAGCTTTTCCTCGAGCCGGTTGATAGCCTGGCTCAGCGGCGGTTGCGCCATGTGCAGGCGCTGTGCGGCCTTGTGAAAGTGCAGCTCTTCGGCCACGGCGATGAACTGCCTGAGCAAGCGTGTTTCGATCATCCAGCATTCCTGCAGc                              >  4:179136/1‑149 (MQ=255)                                                                                                                        aGCTTTTCCTCGAGCCGGTTGATCGCCTGGCTCAGCGGCGGTTGCGCCATGTGCAGGCGCTGTGCGGCCTTGTGAAAGTGCAGc                                                                                             <  3:127252/84‑1 (MQ=255)                                                                                                                        aGCTTTTCCTCGAGCCGGTTGATCGCCTGGCTCAGCGGCGGTTGCGCCATGTGCAGGCGCTGTGCGGCCTTGTGAAAGTGCAGc                                                                                             >  4:127252/1‑84 (MQ=255)                                                                                                                         gCTTTTCCTCGAGCCGGTTGATCGCCTGGCTCAGCGGCGGTTGCGCCATGTGCAGGCGCTGTGCGGCCTTGTGAAAGTGCAGCTCTTCGGCCACGGCGATGAACTGCCTGAGCAAGCGTGTTTCGATCATCCAGCATTCCTGCAGCGTg                           >  5:318299/1‑149 (MQ=255)                                                                                                                            tttCCTCGAGCCGGTTGATCGCCTGGCTCAGCGGCGGTTGCGCCATGTGCAGGCGCTGTGCGGCCTTGTGAAAGTGCAGCTCTTCGGCCACGGCGATGAACTGCCTGAGCAAGCGTGTTTCGATCATCCAGCATTCCTGCAGCGTGGc                         >  6:135978/1‑148 (MQ=255)                                                                                                                             ttCCTCGAGCCGGTTGATCGCCTGGCTCAGCGGCGGTTGCGCCATGTGCAGGCGCTGTGCGGCCTTGTGAAAGTGCAGCTCTTCGGCCACGGCGATGAACTGCCTGAGCAAGCGTGTTTCGATCATCCAGCATTCCTGCAGCGTGGc                         <  1:70233/147‑1 (MQ=255)                                                                                                                              tCCTCGAGCCGGTTGATCGCCTGGCTCAGCGGCGGTTGCGCCATGTGCAGGCGCTGTGCGGCCTTGTGAAAGTGCAGCTCTTCGGCCACGGCGATGAACTGCCTGAGCAAGCTTGTTTCGATCATCCAGCATTCCTGCAGCGTGGCGa                       <  2:306952/148‑1 (MQ=255)                                                                                                                                cttgAGCCGGTTGATCGCCTGGCTCAGCGGCGGTTGCGCCATGTGCAGGCGCTGTGCGGCGTTGTGAAAGTGCAGCTCTTCGGCCACGGCGATGAACTGCCTGAGCAAGCGTGTTTCGATCATCCAGCATTCCTGCAGCGTGGCGACt                     <  1:316818/145‑1 (MQ=255)                                                                                                                                cTCGAGCCGGTTGATCGCCTGGCTCAGCGGCGGTTGCGCCATGTGCAGGCGCTGTGCGGCCTTGTGAAAGTGCAGCTCTTCGGCCACGGCGATGAACTGCCTGAGCAAGCGTGTTTCGATCATCCAGCATTCCTGCAGCGTGGCGACt                     <  3:179136/148‑1 (MQ=255)                                                                                                                                 tCGAGCCGGTTGATCGCCTGGCTCAGCGGCGGTTGCGCCATGTGCAGGCGCTGTGCGGCCTTGTGAAAGTGCAGCTCTTCGGCCACGGCGATGAACTGCCTGAGCAAGCGTGTTTCGATCATCCAGCATTCCTGCAGCGTGGCGACTcg                   >  7:4888/1‑149 (MQ=255)                                                                                                                                      ccGGTTGATCGCCTGGCTCAGCGGCGGTTGCGCCATGTGCAGGCGCTGTGCGGCCTTGTGAAAGTGCAGCTCTTCGGCCACGGCGATGAACTGCCTGAGCAAGCGTGTTTCGATCATCCAGCATTCCTGCAGCGTGGCGACTCGGCGGt              <  8:74197/149‑1 (MQ=255)                                                                                                                                       cGGTTGATCGCCTGGCTCAGCGGCGGTTGCGCCATGTGCAGGCGCTGTGCGGCCTTGTGAAAGTGCAGCTCTTCGGCCACGGCGATGAACTGCCTGAGCAAGCGTGTTTCGATCATCCAGCATTCCTGCAGCGTGGCGACTCGGCGGTg             <  6:318299/149‑1 (MQ=255)                                                                                                                                        ggTTGATCGCCTGGCTCAGCGGCGGTTGCGCCATGTGCAGGCGCTGTGCGGCCTTGTGAAAGTGCAGCTCTTCGGCCACGGCGATGAACTGCCTGAGCAAGCGTGTTTCGATCATCCAGCATTcc                                    >  3:241269/1‑125 (MQ=255)                                                                                                                                        ggTTGATCGCCTGGCTCAGCGGCGGTTGCGCCATGTGCAGGCGCTGTGCGGCCTTGTGAAAGTGCAGCTCTTCGGCCACGGCGATGAACTGCCTGAGCAAGCGTGTTTCGATCATCCAGCATTCCTGCAGCGTGGCGACTCGGCGGTGa            >  6:944/1‑149 (MQ=255)                                                                                                                                        ggTTGATCGCCTGGCTCAGAGGCGGTTGCGCCATGTGCAGGCGCTGTGCGGCCTTGTGAAAGTGCAGCTCTTCGGCCACGGCGATGAACTGCCTGAGCAAGCGTGTTTCGATCATCCAGCATTcc                                    <  4:241269/125‑1 (MQ=255)                                                                                                                                         gTTGATCGCCTGGCTCAGCGGCGGTTGCGCCATGTGCAGGCGCTGTGCGGCCTTGTGAAAGTGCAGCTCTTCGGCCACggcgatcaaccggctcgaggaaaagctcggtttcggccttcttctgcgcaacaagcgcggggtgcgcctga           <  1:45848‑M2/149‑72 (MQ=255)                                                                                                                                            gATCGCCTGGCTCAGCGGCGGTTGCGCCATGTGCAGGCGCTGTGCGGCCTTGTGAAAGTGCAGCTCTTCGGCCACggcgatcaaccggctcgaggaaaagctcggtttcggccttcttctgcgcaacaagcgcggggtgcgcctgaccg        <  5:150694‑M2/149‑75 (MQ=255)                                                                                                                                             aTCGCCgtggccgaagagctgcactttcacaaggccgcacagcgcctgcacatggcgcaaccgccgctgagccaggcgatcaaccggctcgaggaaaagctcggtttcggccttcttctgcgcaacaagcgcggggtgcgcctgaccg        >  1:255974‑M1/1‑6 (MQ=255)                                                                                                                                             aTCGCCgtggccgaagagctgcactttcacaaggccgcacagcgcctgcacatggcgcaaccgccgctgagccaggcgatcaaccggctcgaggaaaagctcggtttcggccttcttctgcgcaacaagcgcggggtgcgcctgaccg        >  2:92036‑M1/1‑6 (MQ=255)                                                                                                                                             aTCGCCgtggccgaagagctgcactttcacaaggccgcacagcgcctgcacatggcgcaaccgccgctgagccaggcgatcaaccggctcgaggaaaagctcggtttcggccttcttctgcgcaacaagcgcggggtgcg                <  5:106396‑M1/140‑135 (MQ=255)                                                                                                                                             aTCGCCgtggccgaagagctgcactttcacaaggccgcacagcgcctgcacatggcgcaaccgccgctgagccaggcgatcaaccggctcgaggaaaagctcggtttcggccttcttctgcgcaacaagcgcggggtgcg                >  6:106396‑M1/1‑6 (MQ=255)                                                                                                                                             aTCGCCTGGCTCAGCGGCGGTTGCGCCATGTGCAGGCGCTGTGCGGCCTTGTGAAAGTGCAGCTCTTCGGCCACGGCGATGAACTGCCTGAGCAAGCGTGTTTCGATCATCCAGCATTCCTGCAGCGTGGCGACTCGGCGGTGATATc        >  6:308577/1‑148 (MQ=255)                                                                                                                                                gCCgtggccgaagagctgcactttcacaaggccgcacagcgcctgcacatggcgcaaccgccgctgagccaggcgatcaaccggctcgaggaaaagctcggtttcggccttcttctgcgcaacaagcgcggggtgcgcctgaccgcagc    <  3:126877‑M1/149‑147 (MQ=255)                                                                                                                                                 ccTGGCTCAGCGGCGGTTGCGCCATGTGCAGGCGCTGTGCTGCCTTGTGAAAGTGCAGCTCTTCGGCCACGGCGATGAACTGCCTGAGCAAGCGTGTTTCGATCATCCAGCATTCCTGCAGCGGGGCGACTCGGCGGTGATATCCATgg   <  7:174172/149‑1 (MQ=255)                                                                                                                                                  cgtggccgaagagctgcactttcacaaggccgcacagcgcctgcacatggcgcaaccgccgctgagccaggcgatcacccggctcgaggaaaagctcggtttcggccttcttctgcgcaacaagcgcggggtgcgcctgaccgcagcgg  <  8:174172‑M1/149‑149 (MQ=255)                                                                                                                                                  cgtggccgaagagctgcactttcacaaggccgcacagcgcctgcacatggcgcaaccgccgctgagccaggcgatcaaccggctcgaggataagctcggtttcggccttcttctgcgcaacaagcgcggggtgcgcctgaccgcagcgg  >  6:7164‑M1/1‑1 (MQ=255)                                                                                                                                                  cTGGCTCAGCGGCGGTTGCGCCATGTGCAGGCGCTGTGCGGCCTTGTGAAAGTGCAGCTCTTCGGCCACGGCGATGAACTGCCTGAGCAAGCGTGTTTCGATCATCCAGCATTCCTGCAGCGTGGCGACTCGGCGGTGATATCCATggg  >  7:172486/1‑149 (MQ=255)                                                                                                                                                  cTGGCTCAGCGGCGGTTGCGCCATGTGCAGGCGCTGTGCGGCCTTGTGAAAGTGCAGCTCTTCGGCCACGGCGATGAACTGCCTGAGCAAGCGTGTTTCGATCATCCAGCATTCCTGCAGCGTGGCGACTCGGCGGTGATATCCATgg   >  3:338598/1‑148 (MQ=255)                                                                                                                                                  |                                                                                                                                                     GCGTACTCGATCCCTTGTTCCAGTTCAGCAAGCGTGCGGTAGGCGGTGTCGAGAAACGCTGCACCCGCTGCGGTCAGGCGCACCCCGCGCTTGTTGCGCAGAAGAAGGCCGAAAC‑‑CGAGCTTTTCCTCGAGCCGGTTGATCGCCTGGCTCAGCGGCGGTTGCGCCATGTGCAGGCGCTGTGCGGCCTTGTGAAAGTGCAGCTCTTCGGCCACGGCGATGAACTGCCTGAGCAAGCGTGTTTCGATCATCCAGCATTCCTGCAGCGTGGCGACTCGGCGGTGATATCCATGGG  >  NC_002947/3604406‑3604697

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.