New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3933865	68 (1.130)	4 (0.070)	4/256	NT	5.9%	coding (1548/1911 nt)	PP_3467	sigma‑54 dependent transcriptional regulator
	?	NC_002947	= 3933896	61 (1.040)					coding (1517/1911 nt)	PP_3467	sigma‑54 dependent transcriptional regulator

GCCAGCGCGGTGCGTACCACCATTTCCAGCTGACGGATGTTGCCGGGCCAGTCGAAGCCTTCGAGCAACGCGGTCAACGCCGGGTCGAGGGTTACGCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCGCCAGGTCGTCGCGTTCACGCAGGGCCGGCAGGCGCAGCGACACACCGTTGACCCGGTAGAACAGGTCTTCACGGAAGTGCTGCTCCTGCACCAGGCGCTTGAGGTCGCGGTGGGTGGCGCAGATCAGCGCCACGTCGATGTCCTG  >  NC_002947/3933728‑3934011                                                                                                                                          |                                                                                                                                                   gCCAGCGCGGTGCGTACCACCATTTCCAGCTGACGGATGTTGCCGGGCCAGTCGAAGCCTTCGAGCAACGCGGTCAACGCCGGGTCGAGGGTTACGCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCGCCAGgtcgtc                                                                                                                                         <  8:30250/149‑1 (MQ=255) gCCAGCGCGGTGCGTACCACCATTTCCAGCTGACGGATGTTGCCGGGCCAGTCGAAGCCTTCGAGCAACGCGGTCAACGCCGGGTCGAGGGTTACGCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCGCCAGgtcgtc                                                                                                                                         <  1:75812/149‑1 (MQ=255)  ccAGCGCGGTGCGTACCACCATTTCCAGCTGACGGATGTTGCCGGGCCAGTCGAAGCCTTCGAGCAACGCGGTCAACGCCGGGTCGAGGGTTACGCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCGCCAGGtcgtcg                                                                                                                                        >  5:270094/1‑149 (MQ=255)  ccAGCGCGGTGCGTACCACCATTTCCAGCTGACGGATGTTGCCGGGCCAGTCGAAGCCTTCGAGCAACGCGGTCAACGCCGGGTCGAGGGTTACGCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCGCCAGGtcgtcg                                                                                                                                        >  8:209497/1‑149 (MQ=255)      cgcgGTGCGTACCACCATTTCCAGCTGACGGATGTTGCCGGGCCAGTCGAAGCCTTCGAGCAACGCGGTCAACGCCGGGTCGAGGGTTACGCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCGCCAGGTCGTCGCGtt                                                                                                                                    <  2:223500/149‑1 (MQ=255)        cgGTGCGTACCACCATTTCCAGCTGACGGATGTTGCCGGGCCAGTCGAAGCCTTCGAGCAACGCGGTCAACGCCGGGTCGAGGGTTACGCTACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCGCCAGGTCGTCGCGTTCa                                                                                                                                  <  2:369909/149‑1 (MQ=255)         ggTGCGTACCACCATTTCCAGCTGACGGATGTTGCCGGGCCAGTCGAAGCCTTCGAGCAACGCGGTCAACGCCGGGTCGAGGGTTACGCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCGCCAGGTCGTCGCGTTCAc                                                                                                                                 <  5:350994/149‑1 (MQ=255)         ggTGCGTACCACCATTTCCAGCTGACGGATGTTGCCGGGCCAGTCGAAGCCTTCGAGCAACGCGGTCAACGCCGGGTCGAGGGTTACGCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCGCCAGGTCGTCGCGTTCAc                                                                                                                                 <  3:265070/149‑1 (MQ=255)           tGCGTACCACCATTTCCAGCTGACGGATGTTGCCGGGCCAGTCGAAGCCTTCGAGCAACGCGGTCAACGCCGGGTCGAGGGTTACGCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCGCCAGGTCGTCGCGTTCACg                                                                                                                                >  2:309261/1‑148 (MQ=255)                 ccaccaTTTCCAGCTGACGGATGTTGCCGGGCCAGTCGAAGCCTTCGAGCAACGCGGTCAACGCCGGGTCGAGGGTTACGCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCGCCAGgt                                                                                                                                             <  2:337990/129‑1 (MQ=255)                 ccaccaTTTCCAGCTGACGGATGTTGCCGGGCCAGTCGAAGCCTTCGAGCAACGCGGTCAACGCCGGGTCGAGGGTTACGCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCGCCAGgt                                                                                                                                             >  1:337990/1‑129 (MQ=255)                  caccaTTTCCAGCTGACGGATGTTGCCGGGCCAGTCGAAGCCTTCGAGCAACGCGGTCAACGCCGGGTCGAGGGTTACGCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCGCCAGGTCGTCGCGTTCACGCAGGGCCg                                                                                                                        >  6:276367/1‑149 (MQ=255)                    ccaTTTCCAGCTGACGGATGTTGCCGGGCCAGTCGAAGCCTTCGAGCAACGCGGTCAACGCCGGGTCGAGGGTTACGCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCGCCAGGTCGTCGCGTTCACGCAGGGCCgg                                                                                                                       >  5:185661/1‑148 (MQ=255)                    ccaTTTCCAGCTGACGGATGTTGCCGGGCCAGTCGAAGCCTTCGAGCAACGCGGTCAACGCCGGGTCGAGGGTTACGCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCGCCAGGTCGTCGCGTTCACGCAGGGCCGGc                                                                                                                      <  7:209497/149‑1 (MQ=255)                          ccAGCTGACGGATGTTGCCGGGCCAGTCGAAGCCTTCGAGCAACGCGGTCAACGCCGGGTCGAGGGTTACGCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCGCCAGGTCGTCGCGTTCACGCAGGGCCGGCAggcg                                                                                                                 <  4:158810‑M2/148‑5 (MQ=255)                            aGCTGACGGATGTTGCCGGGCCAGTCGAAGCCTTCGAGCAACGCGGTCAACGCCGGGTCGAGGGTTACGCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCGCCAGGTCGTCGCGTTCACGCAGGGCCGGCAGGCGCAg                                                                                                              <  8:130408/149‑1 (MQ=255)                                 aCGGATGTTGCCGGGCCAGTCGAAGCCTTCGAGCAACGCGGTCAACGCCGGGTCGAGGGTTACGCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCGCCAGGTCGTCGCGTTCACGCAGGGCCGGCAGGCGCAGCGac                                                                                                          <  3:85075/148‑1 (MQ=255)                                   ggATGTTGCCGGGCCAGTCGAAGCCTTCGAGCAACGCGGTCAACGCCGGGTCGAGGGTTACGCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCtgccggccctgcgtgaacgcgacgacctggcggcgatcat                                                                                                            >  3:227869‑M1/1‑104 (MQ=255)                                   ggATGTTGCCGGGCCAGTCGAAGCCTTCGAGCAACGCGGTCAACGCCGGGTCGAGGGTTACGCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCtgccggccctgcgtgaacgcgacgacctggcggcgatcat                                                                                                            <  4:227869‑M1/144‑41 (MQ=255)                                   ggATGTTGCCGGGCCAGTCGAAGCCTTCGAGCAACGCGGTCAACGCCGGGTCGAGGGTTACGCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCGCCAGGTCGTCGCGTTCACGCAGGGCCGGCAGGCGCAGCGacaca                                                                                                       >  1:238276/1‑149 (MQ=255)                                   ggATGTTGCCGGGCCAGTCGAAGCCTTCGAGCAACGCGGTCAACGCCGGGTCGAGGGTTACGCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCGCCAGGTCGTCGCGTTCACGCAGGGCCGGCAGGCGCAGCGacaca                                                                                                       <  3:158810/149‑1 (MQ=255)                                      tGTTGCCGGGCCAGTCGAAGCCTTCGAGCAACGCGGTCAACGCCGGGTCGAGGGTTACGCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCGCCAGGTCGTCGCGTTCACGCAGGGCCGGCAGGCGCAGCGACACACCg                                                                                                    >  3:246386/1‑149 (MQ=255)                                               gttgctCGAAGGCTTCGAGCAACGCGGTCAACGCCGGGTCGAGGGTTACGCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCGCCAGGTCGTCGCGTTCACGCAGGGCCGGCAGGCGCAGCGACACACCGTTGACCCgg                                                                                           >  1:345580/6‑149 (MQ=255)                                               gCCAGTCGAAGCCTTCGAGCAACGCGGTCAACGCCGGGTCGAGGGTTACGCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCGCCAGGTCGTCGCGTTCACGCAGGGCCGGCAGGCGCAGCGACACACCGTTGACCCgg                                                                                           <  4:242383/149‑1 (MQ=255)                                                 cAGTCGAAGCCTTCGAGCAACGCGGTCAACGCCGGGTCGAGGGTTACGCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCGCCAGGTCGTCGCGTTCACGCAGGGCCGGCAGGCGCAGCGACACACCGTTGACCCgg                                                                                           >  1:791/1‑147 (MQ=255)                                                     cGAAGCCTTCGAGCAACGCGGTCAACGCCGGGTCGAGGGTTACGCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCGCCAGGTCGTCGCGTTCACTCAGGGCCGGCAGGCGCAGCGACACACCGTTGACCCGGTAGaa                                                                                      >  4:268210/1‑148 (MQ=255)                                                     cGAAGCCTTCGAGCAACGCGGTCAACGCCGGGTCGAGGGTTACGCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCGCCAGGTCGTCGCGTTCACGCAGGGCCGGCAGGCGCAGCGACACACCGTTGACCCGGTAGAAc                                                                                     <  3:296904/149‑1 (MQ=255)                                                       aaGCCTTCGAGCAACGCGGTCAACGCCGGGTCGAGGGTTACGCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCGCCAGGTCGTCGCGTTCACGCAGGGCCGGCAGGCGCAGCGACACACCGTTGACCCGGTAGAACAg                                                                                   >  1:169918/1‑149 (MQ=255)                                                         gCCTTCGAGCAACGCGGTCAACGCCGGGTCGAGGGTTACGCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCGCCAGGTCGTCGCGTTCACGCATGGCCGGCAGGCGCAGCGACACACCGTTGACCCGGTAGAACAGGt                                                                                 <  8:16751/149‑1 (MQ=255)                                                            ttCGAGCAACGCGGTCAACGCCGGGTCGAGGGTTACGCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCtgccggccctgcgtgaacgcgacgacctggcggcgatcatcca                                                                                                         >  5:236864‑M1/1‑79 (MQ=255)                                                            ttCGAGCAACGCGGTCAACGCCGGGTCGAGGGTTACGCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCtgccggccctgcgtgaacgcgacgacctggcggcgatcatcca                                                                                                         <  6:236864‑M1/122‑44 (MQ=255)                                                            ttCGAGCAACGCGGTCAACGCCGGGTCGAGGGTTACGCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCGCCAGGTCGTCGCGTTCACGCAGGGc                                                                                                                          >  2:264272/1‑105 (MQ=255)                                                            ttCGAGCAACGCGGTCAACGCCGGGTCGAGGGTTACGCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCGCCAGGTCGTCGCGTTCACGCAGGGc                                                                                                                          <  1:264272/105‑1 (MQ=255)                                                              cGAGCAACGCGGTCAACGCCGGGTCGAGGGTTACGCCACGCGCATCGGCCTTTTCCAGCAGGCCCTGGATGATCGCCGCCAGGTCGTCGCGTTCACGCAGGGCCGGCAGGCGCAGCGACACACCGTTGACCCGGTAGAACAGGTCTTc                                                                             <  8:271220/148‑1 (MQ=255)                                                               gAGCAACGCGGTCAACGCCGGGTCGAGGGTTACGCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCGCCAGGTCGTCGCGTTCACGCAGGGCCGGCAGGCGCAGCGACACACCGTTGACCCGGTAGAACAGGTCTTCAc                                                                           <  6:270094/149‑1 (MQ=255)                                                                 gCAACGCGGTCAACGCCGGGTCGAGGGTTACGCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCGCCAGGTCGTCGCGTTCACGCAGGGCCGGCAGGCGCAGCGACACACCGTTGACCCGGTAGAACAGGTCTTCACg                                                                          >  5:222589/1‑148 (MQ=255)                                                                   aaCGCGGTCAACGCCGGGTCGAGGGTTACGCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCGCCAGGTCGTCGCGTTCACGCAGGGCCGGCAGGCGCAGCGACACACCGTTGACCCGGTAGAACAGGTCTTCACGGaa                                                                       <  7:307019/149‑1 (MQ=255)                                                                      gcgGTCAACGCCGGGTCGAGGGTTACGCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCGCCAGGTCGTCGCGTTCACGCAGGGCCGGCAGGCGCAGCGACACACCGTTGACCCGGTAGAACAGGTCTTCACGGAAGtg                                                                    <  5:12862/149‑1 (MQ=255)                                                                      ccacacAACGCCGGGTCGAGGGTTACGCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCGCCAGGTCGTCGCGTTCACGCAGGGCCGGCAGGGGCAGCGACACACCGTTGACCCGGTAGAAGAGGTCTTCACGGAAGtg                                                                    <  5:83300/144‑1 (MQ=255)                                                                         gTCAGCGCCGGGTCGAGGGTTACGCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGTCGCCAGGTCGTCGCGTTCACGCAGGGCCGGCAGGCGCAGCGACACACCGTTGACCCGGTAGAACAGGTCTTCACGGAAGtgctg                                                                 <  2:116820/149‑1 (MQ=255)                                                                         gTCAACGCCGGGTCGAGGGTTACGCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCGCCAGGTCGTCGCGTTCACGCAGGGCCGGCAGGCGCAGCGACACACCGTTGACCCGGTAGAACAGGTCTTCACGGAAGtgctg                                                                 <  6:222589/149‑1 (MQ=255)                                                                           cAACGCCGGGTCGAGGGTTACGCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCGCCAGGTCGTCGCGTTCACGCAg                                                                                                                             >  2:232469/1‑87 (MQ=255)                                                                           cAACGCCGGGTCGAGGGTTACGCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCGCCAGGTCGTCGCGTTCACGCAg                                                                                                                             <  1:232469/87‑1 (MQ=255)                                                                            aaCGCCGGGTCGAGGGTTACGCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCGCCAGGTCGTCGCGTTCACGCAGGGCCGGCAGGCGCAGCGACACACCGTTGACCCGGTAGAACAGGTCTTCACGGAAGTGCTGCTc                                                              <  3:268210/149‑1 (MQ=255)                                                                               gCCGGGTCGAGGGTTACGCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCGCCAGGTCGTCGCGTTCACGCAGGGCCGGCAGGCGCAGCGACACACCGTTGACCCGGTAGAACAGGTCTTCACGGAAGTGCTGCTCCTg                                                           <  5:276367/149‑1 (MQ=255)                                                                                ccGGGTCGAGGGTTACGCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCGCCAGGTCGTCGCGTTCACGCAGGGCCGGCAGGCGCAGCGACACACCGtt                                                                                                  <  6:34591/109‑1 (MQ=255)                                                                                ccGGGTCGAGGGTTACGCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCGCCAGGTCGTCGCGTTCACGCAGGGCCGGCAGGCGCAGCGACACACCGtt                                                                                                  >  5:34591/1‑109 (MQ=255)                                                                                 cGGGTCGAGGGTTACGCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCGCCAGGTCGTCGCGTTCACGCAGGGCCGGCAGGCGCAGCGACACACCGTTGACCCGGTAGAACAGGTCTTCACGGACGTGCTGCTCCTGCa                                                         >  4:79670/1‑149 (MQ=255)                                                                                        aGGGTTACGCCACGCGCATCGGCTTTGTCCAGCAGGCCCTGGACGATCGCCGCCAGGTCGTCGCGTTCACGCAGGGCCGGCAGGCGCAg                                                                                                              <  1:301753/89‑1 (MQ=255)                                                                                        aGGGTTACGCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGACGATCGCCGCCAGGTCGTCGCGTTCACGCAGGGCCGGCAGGCGCAg                                                                                                              >  2:301753/1‑89 (MQ=255)                                                                                         gggTTACGCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCGCCAGGTCGTCGCGTTCACGCAGGGCCGGCAGGCGCAGCGACACACCGTTGACCCGGTAGAACAGGTCTTCACGGAAGTGCTGCTCCTGCACCAGgcgc                                                 <  6:52049/149‑1 (MQ=255)                                                                                           gTTACGCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCGCCAGGTCGTCGCGTTCACGCAGGGCCGGCAGGCGCAGCGACACACCGTTGACCCGGTAGAACAGGTCTTCACGGAAGTGCTGCTCCTGCACCAGGCGCt                                                <  2:791/148‑1 (MQ=255)                                                                                             tACGCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCGCCAGGTCGTCGCGTTCACGCAGGGCCGGCAGGCGCAGCGACACACCGTTGACCCGGTAGAACAGGTCTTCACGGAAGTGCTGCTCCTGCACCAGGCGCtt                                               >  4:127540/1‑147 (MQ=255)                                                                                               cGCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCGCCAGGTCGTCGCGTTCACGCAGGGCCGGCAGGCGCAGCGACACACCGTTGACCCGGTAGAACAGGTCTTCACGGAAGTGCTGCTCCTGCACCAGGCGCTTGAg                                            <  6:87565/148‑1 (MQ=255)                                                                                               cGCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCGCCAGGTCGTCGCGTTCACGCAGGGCCGGCAGGCGCAGCGACACACCGTTGACCCGGTAGAACAGGTCTTCACGGAAGTGCTGCTCCTGCACCAGGCGCTTGAg                                            <  3:211807/148‑1 (MQ=255)                                                                                                gCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCGCCAGGTCGTCGCGt                                                                                                                                     <  4:174523/58‑1 (MQ=255)                                                                                                gCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCGCCAGGTCGTCGCGt                                                                                                                                     >  3:174523/1‑58 (MQ=255)                                                                                                   aCGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCGCCAGGTCGTCGCGTTCACGCAGGGCCGGCAGGCGCAGCGACACACCGTTGACCCGGTAGAACAGGTCTTCACGGAAGTGCTGCTCCTGCACCAGGCGCTTGAGGTcgc                                       <  4:287926/149‑1 (MQ=255)                                                                                                               cTTGTCCAGCAGGCCCTGGATGATCGCCGCCAGGTCGTCGCGTTCACGCAGGGCCGGCAGGCGCAGCGACACACCGTTGACCCGGTAGAACAGGTCTTCACGGAAGTGCTGCTCCTGCACCAGGCGCTTGAGGTCGCGGTGGGTGgcgc                           <  1:309261/149‑1 (MQ=255)                                                                                                               cTTGTCCAGCAGGCCCTGGATGATCGCCGCCAGGTCGTCGCGTTCACGCAGGGCCGGCAGGCGCAGCGACACACCGTTGACCCGGTAGAACAGGTCTTCACGGAAGTGCTGCTCCTGCACCAGGCGCTTGAGGTCGCGGTGGGTGgcg                            >  7:242762/1‑148 (MQ=255)                                                                                                                 cttCCAGCAGGCCCTGGATGATCGCCGCCAGGTCGTCGCGTTCACGCAGGGCCGGCAGGCGCAGCGACACACCGTTGACCCGGTAGAACAGGTCTTCACGGAAGTGCTGCTCCTGCACCAGGCGCTTGAGGTCGCGGTGGGTGGCGCAg                         <  5:90652/147‑1 (MQ=255)                                                                                                                   tCCAGCAGGCCCTGGATGATCGCCGCCAGGTCGTCGCGTTCACGCAGGGCCGGCAGGCGCAGCGACACACCGTTGACCCGGTAGAACAGGTCTTCACGGAAGTGCTGCTCCTGCACCAGGCGCTTGAGGTCGCGGTGGGTGgcg                            >  6:146425/1‑144 (MQ=255)                                                                                                                   tCCAGCAGGCCCTGGATGATCGCCGCCAGGTCGTCGCGTTCACGCAGGGCCGGCAGGCGCAGCGACACACCGTTGACCCGGTAGAACAGGTCTTCACGGAAGTGCTGCTCCTGCACCAGGCGCTTGAGGTCGCGGTGGGTGGCGCAgct                       >  4:316911/1‑147 (MQ=255)                                                                                                                   tCCAGCAGGCCCTGGATGATCGCCGCCAGGTCGTCGCGTTCACGCAGGGCCGGCAGGCGCAGCGACACACCGTTGACCCGGTAGAACAGGTCTTCACGGAAGTGCTGCTCCTGCACCAGGCGCTTGAGGTCGCGGTGGGTGGCGCAGa                        <  2:238276/148‑1 (MQ=255)                                                                                                                    ccAGCAGGCCCTGGATGATCGCCGCCAGGTCGTCGCGTTCACGCAGGGCCGGCAGGCGCAGCGaca                                                                                                         <  8:109702/66‑1 (MQ=255)                                                                                                                    ccAGCAGGCCCTGGATGATCGCCGCCAGGTCGTCGCGTTCACGCAGGGCCGGCAGGCGCAGCGACACACCGTTGCCCCGGTAGAACAGGTCTTCACGGAAGTGCTGCTCCTGCACCAGGCGCTTGAGGTCGCGGTGGGTGGCGCAg                         >  6:90652/1‑146 (MQ=255)                                                                                                                     cagcagGCCCTGGATGATCGCCGCCAGGTCGTCGCGTTCACGCAGGGCCGGCAGGCGCAGCGACACACCGTTGACCCGGTAGAACAGGTCTTCACGGAAGTGCTGCTCCTGCACCAGGCGCTTGAGGTCGCGGTGGGTGGCGCAGATCa                     <  3:127540/149‑1 (MQ=255)                                                                                                                        cagGCCCTGGATGATCGCCGCCAGGTCGTCGCGTTCACGCAGGGCCGGCAGGCGCAGCGACACACCGTTGACCCGGTAGAACAGGTCTTCACGGAAGTGCTGCTCCTGCACCAGGCGCTTGAGGTCGCGGTGGGTGGCGCAGATCAgcg                  >  3:258646/1‑149 (MQ=255)                                                                                                                             ccTGGATGATCGCCGCCAGGTCGTCGCGTTCACGCAGGGCCGGCAGGCGCAGCGACACACCGTTGACCCGGTAGAACAGGTCTTCACGGAAGTGCTGCTCCTGCACCAGGCGCTTGAGGTCGCGGTGGGTGGCGCAGATCAGCGCCACg             >  4:369944/1‑149 (MQ=255)                                                                                                                               tGGATGATCGCCGCCAGGTCGTCGCGTTCACGCAGGGCCGGCAggcgatcatccagggcctgctggacaaggccgatgcgcgtggcgtaaccctcgacccggcgttgaccgcgttgctcgaa                                      <  6:236864‑M2/122‑80 (MQ=255)                                                                                                                               tGGATGATCGCCGCCAGGTCGTCGCGTTCACGCAGGGCCGGCAggcgatcatccagggcctgctggacaaggccgatgcgcgtggcgtaaccctcgacccggcgttgaccgcgttgctcgaa                                      >  5:236864‑M2/1‑43 (MQ=255)                                                                                                                                  atgatCGCCGCCAGGTCGTCGCGTTCACGCAGGGCCGGCAggcgatcatccagggcctgctggacaaggccgatgcgcgtggcgtaaccctcgacccggcgttgaccgcgttgctcgaaggcttcgactggcccggcaacatcc             >  3:227869‑M2/1‑40 (MQ=255)                                                                                                                                  atgatCGCCGCCAGGTCGTCGCGTTCACGCAGGGCCGGCAggcgatcatccagggcctgctggacaaggccgatgcgcgtggcgtaaccctcgacccggcgttgaccgcgttgctcgaaggcttcgactggcccggcaacatcc             <  4:227869‑M2/144‑105 (MQ=255)                                                                                                                                   tgatCGCCGCCAGGTCGTCGCGTTCACGCAGGGCCGGCAGGCGCAGCGACACACCGTTGACCCGGTAGAACAGGTCTTCACGGAAGTGCTGCTCCTGCACCAGGCGCTTGAGGTCGCGGTGGGTGGCGCAGATc                      <  6:214579/134‑1 (MQ=255)                                                                                                                                   tgatCGCCGCCAGGTCGTCGCGTTCACGCAGGGCCGGCAGGCGCAGCGACACACCGTTGACCCGGTAGAACAGGTCTTCACGGAAGTGCTGCTCCTGCACCAGGCGCTTGAGGTCGCGGTGGGTGGCGCAGATc                      >  5:214579/1‑134 (MQ=255)                                                                                                                                   tgatCGCCGCCAGGTCGTCGCGTTCACGCAGGGCCGGCAGGCGCAGCGACACACCGTTGACCCGGTAGAACAGGTCTTCACGGAAGTGCTGCTCCTGCACCAGGCGCTTGAGGTCGCGGTGGGTGGCGCAGATCAGCGCCACGTCGATg       >  1:9637/1‑149 (MQ=255)                                                                                                                                     atCGCCGCCAGGTCGTCGCGTTCACGCAGGGCCGGCAGGCGCAGCGACACACCGTTGACCCGGTAGAACAGGTCTTCACGGAAGTGCTGCTCCTGCACCAGGCGCTTGAGGTCGCGGTGGGTGGCGCAGATCAGCGCCACGTCGATGTc     <  4:246386/149‑1 (MQ=255)                                                                                                                                       cgccgcCAGGTCGTCGCGTTCACGCAGGGCCGGCAGGCGCAGCGACACACCGTTGACCCGGTAGAACAGGTCTTCACGGAAGTGCTGCTCCTGCACCAGGCGCTTGa                                             <  2:167987/107‑1 (MQ=255)                                                                                                                                       cgccgcCAGGTCGTCGCGTTCACGCAGGGCCGCCAGGCGCAGCGACACACCGTTGACCCGGTAGAACAGGTCTTCACGGAAGTGCTGCTCCTGCACCAGGCGCTTGa                                             >  1:167987/1‑107 (MQ=255)                                                                                                                                       cGCCtgccggccctgcgtgaacgcgacgacctggcggcgatcatccagggcctgctggacaaggccgatgcgcgtggcgtaaccctcgacccggcgttgaccgcgttgctcgaaggcttcgactggcccggcaacatccgtcagctgg    <  4:158810‑M1/148‑145 (MQ=255)                                                                                                                                        gccgccAGGTCGTCGCGTTCACGCAGGGCCGGCAGGCGCAGCGACACACCGTTGACCCGGTAGAACAGGTCTTCACGGAAGTGCTGCTCCTGCACCAGGCGCTTGAGGTCGCGGTGGGTGGCGCAGATCAGCGCCACGTCGATGTCCTg  >  3:331116/1‑149 (MQ=255)                                                                                                                                          |                                                                                                                                                   GCCAGCGCGGTGCGTACCACCATTTCCAGCTGACGGATGTTGCCGGGCCAGTCGAAGCCTTCGAGCAACGCGGTCAACGCCGGGTCGAGGGTTACGCCACGCGCATCGGCCTTGTCCAGCAGGCCCTGGATGATCGCCGCCAGGTCGTCGCGTTCACGCAGGGCCGGCAGGCGCAGCGACACACCGTTGACCCGGTAGAACAGGTCTTCACGGAAGTGCTGCTCCTGCACCAGGCGCTTGAGGTCGCGGTGGGTGGCGCAGATCAGCGCCACGTCGATGTCCTG  >  NC_002947/3933728‑3934011

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.