New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4633001 | 49 (0.810) | 3 (0.050) | 3/256 | NT | 5.7% | coding (253/561 nt) | pgsA | CDP‑diacylglycerol‑glycerol‑3‑phosphate 3‑phosphatidyltransferase |
? | NC_002947 | = 4633026 | 51 (0.870) | coding (228/561 nt) | pgsA | CDP‑diacylglycerol‑glycerol‑3‑phosphate 3‑phosphatidyltransferase |
CATCTGCGCCGCAGTCTTCCACTTACCGAGGTTGGACACCGCCACATGCGCCCGCGCGCCTAGCTCGGCCATCCACTCGCGCAGCGCAGACACCACGATCTCGCGGCCGATGATGACCGCCGCCGGCAGGGTCAGCCAGAAGTTGGCGTGGGTCTGCACCAGCAGCACCAGGGCCACTGCCACCATCAGCTTGTCGGCCACCGGGTCGAGGAAGGCGCCGAACGGCGTGCTCTGCTGCAGTCGACGGGCCAGGTAGCCGTCCAGCCAATCGGTGGCGGCGGCTACGGC > NC_002947/4632855‑4633142 | cATCTGCGCCGCAGTCTTCCACTTACCGAGGTTGGACACCGCCACATGCGCCCGCGCGCCTAGCTCGGCCATCCACTCGCGCAGCGCAGACACCACGATCTCGCGGCCGATGATGACCGCCGCCGGCAGGGTCAGCCAGAAGTTGGCGt < 2:56329/149‑1 (MQ=255) cATCTGCGCCGCAGTCTTCCACTTACCGAGGTTGGACACCGCCACATGCGCCCGCGCGCCTAGCTCGGCCATCCACTCGCGCAGCGCAGACACCACGATCTCGCGGCCGATGATGACCGCCGCCGGCAGGGTCAGCCAGAAGTTGGCGt < 2:78858/149‑1 (MQ=255) aTCTGCGCCGCAGTCTTCCACTTACCGAGGTTGGACACCGCCACATGCGCCCGCGCGCCTAGCTCGGCCATCCACTCGCGCAGCGCAGACACCACGATCTCGCGGCCGATGATGACCGCCGCCGGCAGGGTCAGCCAGAAGTTGGCGt < 8:123998/148‑1 (MQ=255) cgccgcAGTCTTCCACTTACCGAGGTTGGACACCGCCACATGCGCCCGCGCGCCTAGCTCGGCCATCCACTCGCGCAGCGCAGACACCACGATCTCGCGGCCGATGATGACCGCCGCCGGCAGGGTCAGCCAGAAGTTGGCGTgg < 8:89931/145‑1 (MQ=255) gTCTTCCACTTACCGAGGTTGGACACCGCCACATGCGCCCGCGCGCCTAGCTCGGCCATCCACTCGCGCAGCGCAGACACCACGATCTCGCGGCCGATGATGACCGCCGCCGGCAGGGTCAGCCAGAAGTTGGCGTGGGTCTGCACcag < 7:174708/149‑1 (MQ=255) tCTTCCACTTACCGAGGTTGGACACCGCCACATGCGCCCGTGCGCCTAGCTCGGCCATCCACTCGCGCAGCGCAGACACCACGATCTCGCGGCCGATGATGACCGCCGCCGGCAGGGTCAGCCAGAAGTTGGCGTGGGTCTGCACcag > 4:773/1‑148 (MQ=255) ccACTTACCGAGGTTGGACACCGCCACATGCGCCCGCGCGCCTAGCTCGGCCATCCACTCGCGCAGCGCAGACACCACGATCTCGCGGCCGATGATGACCGCCGCCGGCAGGGTCAGCCAGAAGTTGGCGTGGGTCTGCACcagca < 7:47368/146‑1 (MQ=255) aCCGAGGTTGGACACCGCCACATGCGCCCGCGCGCCTAGCTCGGCCATCCACTCGCGCAGCGCAGACACCACGATCTCGCGGCCGATGATGACCGCCGCCGGCAGGGTCAGCCAGAAGTTGGCGTGGGTCTGCACCAGCAGCACCAgg < 6:148487/148‑1 (MQ=255) aCCGAGGTTGGACACCGCCACATGCGCCCGCGCGCCTAGCTCGGCCATCCACTCGCGCAGCGCAGACACCACGATCTCGCGGCCGATGATGACCGCCGCCGGCAGGGTCAGCCAGAAGTTGGCGTGGGTCTGCACCAGCAGCACCAgg < 5:335978/148‑1 (MQ=255) ggTTGGACACCGCCACATGCGCCCGCGCGCCTAGCTCGGCCATCCACTCGCGCAGCGCAGACACCACGATCTCGCGGCCGATGATGACCGCCGCCGGCAGGGTCAGCCAGAAGTTGGCGTGGGTCTGCACcagc < 6:6445/134‑1 (MQ=255) ggTTGGACACCGCCACATGCGCCCGCGCGCCTAGCTCGGCCATCCACTCGCGCAGCGCAGACACCACGATCTCGCGGCCGATGATGACCGCCGCCGGCAGGGTCAGCCAGAAGTTGGCGTGGGTCTGCACcagc > 5:6445/1‑134 (MQ=255) gTTGGACACCGCCACATGCGCCCGCGCGCCTAGCTCGGCCATCCACTCGCGCAGCGCAGACACCACGATCTCGCGGCCGATGATGACCGCCGCCGGCAGGGTCAGCCAGAAGTTGGCGTGGGTCTGCACCAGCAGCACCAGGGCCACTg < 4:349097/149‑1 (MQ=255) ggcccccgccacATGCGCCCGCGCGCCTAGCTCGGCCATCCACTCGCGCAGCGCAGACACCACGATCTCGCGGCCGATGATGACCGCCGCCGGCAGGGTCAGCCAGAAGTTGGCcctggtgctgctggtgcagacccacgccaacttct < 1:137365‑M1/144‑36 (MQ=255) acCGCCACATGCGCCCGCGCGCCTAGCTCGGCCATCCACTCGCGCAGCGCAGACACCACGATCTCGCGGCCGATGATGACCGCCGCCGGCAGGGTCAGCCAGAAGTTGGCGTGGGTCTGCACCAGCAGCACCAGGGCCACTGCCACCAt > 6:253033/1‑149 (MQ=255) ccGCCACATGCGCCCGCGCGCCTAGCTCGGCCATCCACTCGCGCAGCGCAGACACCACGATCTCGCGGCCGATGGTGACCGCCGCCGGCAGGGTCAGCCAGAAGTTGGCGTGGGTCTGCACCAGCAGCACCAGGGCCACTGCCACCATc < 5:237412/149‑1 (MQ=255) ccACATGCGCCCGCGCGCCTAGCTCGGCCATCCACTCGCGCAGCGCAGACACCACGATCTCGCGGCCGATGATGACCGCCGCCGGCAGGGTCAGCCAGAAGTTGGCGTGGGTCTGCACCAGCAGCACCAGGGCCACTGCCACCATCAGc < 5:67496/149‑1 (MQ=255) aTGCGCCCGCGCGCCTAGCTCGGCCATCCACTCGCGCAGCGCAGACACCACGATCTCGCGGCCGATGATGACCGCCGCCGGCAGGGTCAGCCAGAAGTTGGCGTGGGt < 6:225239/108‑1 (MQ=255) aTGCGCCCGCGCGCCTAGCTCGGCCATCCACTCGCGCAGCGCAGACACCACGATCTCGCGGCCGATGATGACCGCCGCCGGCAGGGTCAGCCAGAAGTTGGCGTGGGt > 5:225239/1‑108 (MQ=255) ggCCATCCACTCGCGCAGCGCAGACACCACGATCTCGCGGCCGATGATGACCGCCGCCGGCAGGGTCAGCCAGAAGTTGGCGTGGGTCTGCACCAGCAGCACCAGGGCCACTGCCACCATCa > 4:146734/1‑122 (MQ=255) ggCCATCCACTCGCGCAGCGCAGACACCACGATCTCGCGGCCGATGATGACCGCCGCCGGCAGGGTCAGCCAGAAGTTGGCGTGGGTCTGCACCAGCAGCACCAGGGCCACTGCCACCATCa < 3:146734/122‑1 (MQ=255) cATCCACTCGCGCAGCGCAGACACCACGATCTCGCGGCCGATGATGACCGCCGCCGGCAGGGTCAGCCAGAAGTTGGCGTGGGTCTGCACCAGCAGCACCAGGGCCACTGCCACCATCAGCTTGTCGGCCACCGGGTCGAGGAAGgcgc > 7:241186/1‑149 (MQ=255) aCTCGCGCAGCGCAGACACCACGATCTCGCGGCCGATGATGACCGCCGCCGGCAGGGTCAGCCAGAAGTTGGCcctggtgctgctggtgcagacccacgccaacttctg > 3:51438‑M1/1‑73 (MQ=255) aCTCGCGCAGCGCAGACACCACGATCTCGCGGCCGATGATGACCGCCGCCGGCAGGGTCAGCCAGAAGTTGGCcctggtgctgctggtgcagacccacgccaacttctg < 4:51438‑M1/109‑37 (MQ=255) aCTCGCGCAGCGCAGACACCACGATCTCGCGGCCGATGATGACCGCCGCCGGCAGGGTCAGCCAGAAGTTGGCGTGGGTCTGCACCAGCAGCACCAGGGCCACTGCCACCATCAGCTTGTCGGCCACCGGGTCGAGGAAGGCGCCGAAc > 7:331173/1‑149 (MQ=255) cTCGCGCAGCGCAGACACCACGATCTCGCGGCCGATGATGACCGCCGCCGGCAGGGTCAGCCAGAAGTTGGCGTGGGTCTGCACCAGCAGCACCAGGGCCACTGCCACCATCAGCTTGTCGGCCACCGGGTCGAGGAAGGCGCCGAACg < 8:241186/149‑1 (MQ=255) tCGCGCAGCGCAGACACCACGATCTCGCGGCCGATGATGACCGCCGCCGGCAGGGTCAGCCAGAAGTTGGCGTGGGTCTGCACCAGCAGCACCAGGGCCACTGCCACCATCAGCTTGTCGGCCACCGGGTCGAGGAAGGCGCCGAACgg > 7:119930/1‑149 (MQ=255) tCGCGCAGCGCAGACACCACGATCTCGCGGCCGATGATGACCGCCGCCGGCAGGGTCAGCCAGAAGTTGGCGTGGGTCTGCACCAGCAGCACCAGGGCCACTGCCACCATCAGCTTGTCGGCCACCGGGTCGAGGAAGGCGCCGAACgg > 6:348909/1‑149 (MQ=255) gcgcagcgcaGACACCACGATCTCGCGGCCGATGATGACCGCCGCCGGCAGGGTCAGCCAGAAGTTGGCGTGGGTCTGCACCAGCAGCACCAGGGCCACTGCCACCATCAGCTTGTCGGCCACCGGGTCGAGGAAGGCGCCGAACGGc < 8:12754/148‑1 (MQ=255) agACACCACGATCTCGCGGCCGATGATGACCGCCGCCGGCAGGGTCAGCCAGAAGTTGGCGTGGGTCTGCACCAGCAGCACCAGGGCCACTGCCACCATCAGCTTGTCGGCCACCGGGTCGAGGAAGGCGCCGAACGGCGTGCTctgct > 2:241814/1‑149 (MQ=255) accacGATCTCGCGGCCGATGATGACCGCCGCCGGCAGGGTCAGCCAGAAGTTGGCGTGGGTCTGCACCAGCAGCACCAGGGCCACTGCCACCATCAGCTTGTCGGCCACCGGGTCGAGGAAGGCGCCGAACGGCGTGCTCTGCTGCAg > 5:5475/1‑149 (MQ=255) ccacGTTCTCGCGGCCGATGATGACCGCCGCCGGCAGGGTCAGCCAGAAGTTGGCGTGTGTCTGCAGCAGCAGCACCAGGGCCAGTGCCACGATCAGCTTGTCGGCCACCGGGTCTAGGAAGGGGCCGAACGGCGTGCTCTGCTGCAGt < 2:262951/149‑1 (MQ=255) ccacGATCTCGCGGCCGATGATGACCGCCGCCGGCAGGGTCAGCCAGAAGTTGGCGTGGGTCTGCACCAGCAGCACCAGGGCCACTGCCACCATCAGCTTGTCGGCCACCGGGTCGAGGAAGGCGCCGAACGGCGTGCTCTGCTGCAGt < 1:241814/149‑1 (MQ=255) cacGATCTCGCGGCCGATGATGACCGCCGCGGGCAGGGTCAGCCAGAAGTTGGCGTGGGTCTGCACCAGCAGCACCAGGGCCACTGCCACCATCAGCTTGTCGGCCACCGGGTCGAGGAAGGCGCCGAACGGCGTGCTCTGCTGCAGTc > 1:32584/1‑149 (MQ=255) cacGATCTCGCGGCCGATGATGACCGCCGCCGGCAGGGTCAGCCAGAAGTTGGCGTGGGTCTGCACCAGCAGCACCAGGGCCACTGCCACCATCAGCTTGTCGGCCACCGGGTCGAGGAAGGCGCCGAACGGCGTGCTCTGCTGCAGTc > 4:146660/1‑149 (MQ=255) cacGATCTCGCGGCCGATGATGACCGCCGCCGGCAGGGTCAGCCAGAAGTTGGCGTGGGTCTGCACCAGCAGCACCAGGGCCACTGCCACCATCAGCTTGTCGGCCACCGGGTCGAGGAAGGCGCCGAACGGCGTGCTCTGCTGCAGTc > 6:195828/1‑149 (MQ=255) cacGATCTCGCGGCCGATGATGACCGCCGCCGGCAGGGTCAGCCAGAAGTTGGCGTGGGTCTGCACCAGCAGCACCAGGGCCACTGCCACCATCAGCTTGTCGGCCACCGGGTCGAGGAAGGCGCCGAACGGCGTGCTCTGCTGCAGTc > 4:198918/1‑149 (MQ=255) gatgatGACCGCCGCCGGCAGGGTCAGCCAGAAGTTGGCGTGGGTCTGCACCAGCAGCACCAGGGCCACTGCCACCATCAGCTTGTCGGCCACCGGGTCGAGGAAGGCGCCGAACGGCGTGCTCTGCTGCAGTCGACGGGCCAGGTAGc > 5:367820/1‑149 (MQ=255) atgaCCGCCGCCGGCAGGGTCAGCCAGAAGTTGGCGTGGGTCTGCACCAGCAGCACCAGGGCCACTGCCACCATCAGCTTGTCGGCCACCGGGTCGAGGAAGGCGCCGAACGGCGTGCTCTGCTGCAGTCGACGGGCCAGGTAGCCGt < 5:195828/148‑1 (MQ=255) aCCGCCGCCGGCAGGGTCAGCCAGAAGTTGGCGTGGGTCTGCACCAGCAGCACCAGGGCCACTGCCACCATCAGCTTGTCGGCCACCGGGTCGAGGAAGGCGCCGAACGGCGTGCTCTGCTGCAGTCGACGGGCCAGGTAGCCGTCCa < 3:773/148‑1 (MQ=255) aCCGCCGCCGGCAGGGTCAGCCAGAAGTTGGCGTGGGTCTGCACCAGCAGCACCAGGGCCACTGCCACCATCAGCTTGTCGGCCACCGGGTCGAGGAAGGCGCCGAACGGCGTGCTCTGCTGCAGTCGACGGGCCAGGTAGCCGTCCa < 2:32584/148‑1 (MQ=255) cgccgccgGCAGGGTCAGCCAGAAGTTGGCGTGGGTCTGCACCAGCAGCACCAGGGCCACTGCCACCATCAGCTTGTCGGCCACCGGGTCGAGGAAGGCGCCGAACGGCGTGCTCTGCTGCAGTCGACGGGCCAGGTAGCCGTCCAGc > 3:145504/1‑148 (MQ=255) cgccgccgGCAGGGTCAGCCAGAAGTTGGCGTGGGTCTGCACCAGCAGCACCAGGGCCACTGCCACCATCAGCTTGTCGGCCACCGGGTCGAGGAAGGCGCCGAACGGCGTGCTCTGCTGCAGTCGACGGGCCAGGTAGCCGTCCAGc > 5:2977/1‑148 (MQ=255) cgccgccgGCAGGGTCAGCCAGAAGTTGGCGTGGGTCTGCACCAGCAGCACCAGGGCCACTGCCACCATCAGCTTGTCGGCCACCGGGTCGAGGAAGGCGCCGAACGGCGTGCTCTGCTGCAGTCGACGGG‑CAGGTAGCCGTc < 8:44463/143‑1 (MQ=255) cgccgccgGCAGGGTCAGCCAGAAGTTGGCGTGGGTCTGCACCAGCAGCACCAGGGCCACTGCCACCATCAGCTTGTCGGCCACCGGGTCGAGGAAGGCGCCGAACGGCGTGCTCTGCTGCAGTCGACGGG‑CAGGTAGCCGTc > 7:44463/1‑143 (MQ=255) ccgccgGCAGGGTCAGCCAGAAGTTGGCGTGGGTCTGCACCAGCAGCACCAGGGCCACTGCCACCATCAGCTTGTCGGCCACCGGGTCGAGGAAGGCGCCGAACGGCGTGCTCTGCTGCAGTCGACGGGCCAGGTAGCCGTCCAGCCaa > 7:312257/1‑149 (MQ=255) cgccgGCAGGGTCAGCCAGAAGTTGGCGTGGGTCTGCACCAGCAGCACCAGGGCCACTGCCACCATCAGCTTGTCGGCCACCGGGTCGAGGAAGGCGCCGAACGGCGTGCTCTGCTGCAGTCGACGGGCCAGGTAGCCGTCCAGCCAAt > 6:172961/1‑149 (MQ=255) ggTCAGCCAGAAGTTGGCGTGGGTCTGCACCAGCAGCGCCAGGGCCACTGGCACCATCAGCTTGTCGGCCACCGGGTCGAGGAAGGCGCCGAACGGCGGGCTCTGCTGCAGTCGACGGGCGAGGTAGCCGTCCAGGGAATCGGTggcgg > 4:89663/1‑149 (MQ=255) tCAGCCAGAAGTTGGCGTGGGTCTGCACCAGCAGCACCAGGGCCACTGCCACCATCAGCTTGTCGGCCACCGGGTCGAGGAAGGCGCCGAACGGCGTGCTCTGCTGCAGTCGACGGGCCAGGTAGCCGTCCAGCCAATCGGTggcggcg > 2:364800/1‑149 (MQ=255) aGCCAGAAGTTGGCGTGGGTCTGCACCAGCAGCACCAGGGCCACTGCCACCATCAGCTTGTCGGCCACCGGGTCGAGGAAGGCGCCGAACGGCGTGCTCTGCTGCAGTCGACGGGCCAGGTAGCCGTCCAGCCAATCggtggcggtggc < 6:5475/149‑1 (MQ=255) ccAGAAGTTGGCGTGGGTCTGCACCAGCAGCACCAGGGCCACTGCCACCATCAGCTTGTCGGCCACCGGGTCGAGGAAGGCGCCGAACGGCGTGCTCTGCTGCAGTCGACGGGCCAGGTAGCCGTCCCGCCAATCGGTggcggcggcga > 6:317263/1‑147 (MQ=255) ccAGAAGTTGGCGTGGGTCTGCACCAGCAGCACCAGGGCCACTGCCACCATCAGCTTGTCGGCCACCGGGTCGAGGAAGGCGCCGAACGGCGTGCTCTGCTGCAGTCGACGGGCCAGGTAGCCGTCCAGCCAATCGGTGGCGGCGGCTa > 3:214669/1‑149 (MQ=255) ccAGAAGTTGGCGTGGGTCTGCACCAGCAGCACCAGGGCCACTGCCACCATCAGCTTGTCGGCCACCGGGTCGAGGAAGGCGCCGAACGGCGTGCTCTGCTGCAGTCGACGGGCCAGGTAGCCGTCCAGCCAATCGGTGGCGGCGGCTa > 2:336583/1‑149 (MQ=255) cAGAAGTTGGCGTGGGTCTGCACCAGCAGCACCAGGgccaacttctggctgaccctgccggcggcggtcatcatcggccgcgagatcgtggtgtctgcgctgcgcgagt > 3:51438‑M2/1‑36 (MQ=255) cAGAAGTTGGCGTGGGTCTGCACCAGCAGCACCAGGgccaacttctggctgaccctgccggcggcggtcatcatcggccgcgagatcgtggtgtctgcgctgcgcgagt < 4:51438‑M2/109‑74 (MQ=255) aGAAGTTGGCGTGGGTCTGCACCAGCAGCACCAGGgccaacttctggctgaccctgccggcggcggtcatcatcggccgcgagatcgtggtgtctgcgctgcgcgagtggatggccgagctaggcgcgcgggcgcatgtggcgggggcc < 1:137365‑M2/149‑115 (MQ=255) aGAAGTTGGCGTGGGTCTGCACCAGCAGCACCAGGGCCACTGCCA‑CATCAGCTTGTCGGCCACCGGGTCGAGGAAGGCGCCGAACGGCGTGCTCTGCTGCAGTCGACGGGCCAGGTAGCCGTCCAGCCAATCGGTGGCGGCGGCTACgg < 8:55622/149‑1 (MQ=255) aaGTTGGCGTGGGTCTGCACCAGCAGCACCAGGGCCACTGCCACCATCAGCTTGTCGGCCACCGGGTCGAGGAAGGCGCCGAACGGCGTGCTCTGCTGCAGTCGACGGGCCAGGTAGCCGTCCAGCCAATCGGTGGCGGCGGCTACGGc < 1:336583/149‑1 (MQ=255) aaGTTGGCGTGGGTCTGCACCAGCAGCACCAGGGCCACTGCCACCATCAGCTTGTCGGCCACCGGGTCGAGGAAGGCGCCGAACGGCGTGCTCTGCTGCAGTCGACGGGCCAGGTAGCCGTCCAGCCAATCGGTGGCGGCGGCTACGGc < 5:253033/149‑1 (MQ=255) aaGTTGGCGTGGGTCTGCACCAGCAGCACCAGGGCCACTGCCACCATCAGCTTGTCGGCCACCGGGTCGAGGAAGGCGCCGAACGGCGTGCTCTGCTGCAGTCGACGGGCCAGGTAGCCGTCCAGCCAATCGGTGGCGGCGGCTACGGc < 4:175640/149‑1 (MQ=255) | CATCTGCGCCGCAGTCTTCCACTTACCGAGGTTGGACACCGCCACATGCGCCCGCGCGCCTAGCTCGGCCATCCACTCGCGCAGCGCAGACACCACGATCTCGCGGCCGATGATGACCGCCGCCGGCAGGGTCAGCCAGAAGTTGGCGTGGGTCTGCACCAGCAGCACCAGGGCCACTGCCACCATCAGCTTGTCGGCCACCGGGTCGAGGAAGGCGCCGAACGGCGTGCTCTGCTGCAGTCGACGGGCCAGGTAGCCGTCCAGCCAATCGGTGGCGGCGGCTACGGC > NC_002947/4632855‑4633142 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |