New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5118906 =	65 (1.080)	4 (0.070)	4/252	NT	6.0%	coding (680/1341 nt)	PP_4505	sensor histidine kinase
	?	NC_002947	5118969 =	64 (1.110)					coding (743/1341 nt)	PP_4505	sensor histidine kinase

TAAGCCGCCTGCGCAGTGCCGTACACGACCTGGGCCAGACCACCTATCAGCAGAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGTTTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGC‑AAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGCCGCGCCTGACCCGCGAATGCGACC  >  NC_002947/5118759‑5119049                                                                                                                                                     |                                                                                                                                                tAAGCCGCCTGCGCAGTGCCGTACACGACCTGGGCCAGACCACCTATCAGCAGAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGTTTGGCGTGCTGGCCAAGGACTTCAACTAGATGGGCGCACGCCTGC‑AAAGACCCATTgg                                                                                                                                                 >  8:136623/1‑148 (MQ=255)  cggcatgggcttgttcggcatccacccgggccagggcgaggatttcgctgatcaggtcttccaggcggtcgcattcgcgggtcaggcgcgaccacagcgcttgccgctgctcaggctcggcgcgttcggccagggccagggcgatgcg                                                                                                                                                 >  4:353303‑M1/148‑148 (MQ=255)  aaGCCGCCTGCGCAGTGCCGTACACGACCTGGGCCAGACCACCTATCAGCAGAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGTTTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGC‑AAAGCACCATTgg                                                                                                                                                 >  7:114659/1‑147 (MQ=255)   ggcatgggcttgttcggcatccacccgggccagggcgaggatttcgctgatcaggtgttccaggcggtcgcattcgcgggtcaggcgcggccacagcgcttgccgctgctcaggctcggcgcgttcggccagggccagggcgatgcgc                                                                                                                                                >  7:231775‑M1/147‑148 (MQ=255)   aGCCGCCTGCGCAGTGCCGTACACGACCTGGGCCAGACCACCTATCAGCAGAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGTTTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGC‑AAAGCACCATTGGcag                                                                                                                                              >  5:210448/1‑149 (MQ=255)   aGCCGCCTGCGCAGTGCCGTACACGACCTGGGCCAGACCACCTATCAGCAGAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGTTTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGC‑AAAGCACCATTGGca                                                                                                                                               <  5:143590/148‑1 (MQ=255)     catgggcttgttcggcatccacccgggccagggcgaggatttcgctgatcaggtcttccaggcggtcgcattcgcgggtcaggcgcggccacagcgcttgccgctgctcaggctcggcgcgttcggccagggccagggcgatgcGcagc                                                                                                                                             >  3:311686‑M1/145‑149 (MQ=255)       gccTGCGCAGTGCCGTACACGACCTGGGCCAGACCACCTATCAGCAGAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGTTTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGC‑AAAGCACCATTGGcagccag                                                                                                                                          >  4:153380/1‑149 (MQ=255)       gccTGCGCAGTGCCGTACACGACCTGGGCCAGACCACCTATCAGCAGAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGTTTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGC‑AAAGCACCATTGGcagccag                                                                                                                                          >  2:236445/1‑149 (MQ=255)            cgcAGTGCCGTACACGACCTGGGCCAGACCACCTATCAGCAGAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGTTTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGC‑AAAGCACCATTGGCAgccagcgcca                                                                                                                                     <  3:153380/149‑1 (MQ=255)                      tACACGACCTGGGCCAGACCACCTATCAGCAGAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGTTTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGC‑AAAGCACCATTGGca                                                                                                                                               <  4:317489/129‑1 (MQ=255)                      tACACGACCTGGGCCAGACCACCTATCAGCAGAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGTTTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGC‑AAAGCACCATTGGca                                                                                                                                               >  3:317489/1‑129 (MQ=255)                         acGACCTGGGCCAGACCACCTATCAGCAGAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGTTTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGC‑AAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGAc                                                                                                                        <  8:114659/149‑1 (MQ=255)                           gACCTGGGCCAGACCACCTATCAGCAGAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGTTTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGC‑AAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACgt                                                                                                                      >  7:187707/1‑149 (MQ=255)                            aCCTGGGCCAGACCACCTATCAGCAGAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGTTTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGC‑AAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACgtg                                                                                                                     >  7:289290/1‑149 (MQ=255)                            aCCTGGGCCAGACCACCTATCAGCAGAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGTTTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGC‑AAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACgtg                                                                                                                     >  6:227745/1‑149 (MQ=255)                                  gCCAGACCACCTATCAGCAGAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGTTTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGC‑AAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCAc                                                                                                               <  2:311563/149‑1 (MQ=255)                                    cAGACCACCTATCAGCAGAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGTTTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCATGCCTGC‑AAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACg                                                                                                              >  8:352428/1‑148 (MQ=255)                                       accaccTATCAGCAGAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGTTTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGC‑AAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACt                                                                                                          <  4:73822/149‑1 (MQ=255)                                         ccccTATCAGCAGAACCGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGTTTGGCGTGCTGGCCAAGGACTTCCACAAGATGGGCGCACGCCGGC‑AAGGCACCATTGGCCGCCAGCGCCAGCTGCTACGCGACGTGGCCCCCGACCTgc                                                                                                        >  8:234616/3‑149 (MQ=255)                                         caccTATCAGCAGAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGTTTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGC‑AAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTgc                                                                                                        >  4:132678/1‑149 (MQ=255)                                              tcgctgatcaggtcttccaggcggtcgcattcgcgggtcaggcgcggccacagcgcttgccgctgctcaggctcggcgcgttcggccagggccagggcgatgcGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTc                                                                                                    <  8:322718‑M1/46‑1 (MQ=255)                                               tccgcagAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGTTTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGC‑AAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGc                                                                                                  <  8:95070/146‑1 (MQ=255)                                                 agcagAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGTTTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCATGCCTGC‑AAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCa                                                                                                <  7:352428/149‑1 (MQ=255)                                                 agcagAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGTTTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGC‑AAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGTGACGTGTCCCACGAACTGCGCTCGCCa                                                                                                <  6:210448/149‑1 (MQ=255)                                                  gcagAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGTTTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGC‑AAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCAc                                                                                               >  2:141108/1‑149 (MQ=255)                                                    agAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGTTTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGC‑AAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAAc                                                                                                           <  3:244929/135‑1 (MQ=255)                                                    agAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGTTTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGC‑AAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAAc                                                                                                           >  4:244929/1‑135 (MQ=255)                                                    agAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGTTTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGC‑AAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTg                                                                                             >  6:140839/1‑149 (MQ=255)                                                     gAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGTTTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGC‑AAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTgg                                                                                            >  5:284023/1‑149 (MQ=255)                                                      aaCAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGTTTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGC‑AAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGc                                                                                           >  7:326986/1‑149 (MQ=255)                                                           ccTGGCACGGCTGGCAGCGCGGCGCGACGAGTTTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGC‑AAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGc                                                                                      >  3:239311/1‑149 (MQ=255)                                                           ccTGGCACGCCTGGCAGCGCGGCGCGACGAGTTTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGC‑AAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGc                                                                                      >  6:198866/1‑149 (MQ=255)                                                               gCACGGCTGGCAGCGCGGCGCGACGAGTTTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGC‑AAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTgcg                                                                                  >  4:4629/1‑149 (MQ=255)                                                               gCACGGCTGGCAGCGCGGCGCGACGAGTTTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGC‑AAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTgc                                                                                   <  7:186671/148‑1 (MQ=255)                                                               gCACGGCTGGCAGCGCGGCGCGACGAGTTTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGC‑AAAGAACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTgcg                                                                                  >  5:315297/1‑149 (MQ=255)                                                                   cggtcgcattcgcgggtcaggcgcggccacagcgcttgccgctgctcaggctcggcgcgttcggccagggccagggcgatgcGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCAt                                                                               >  7:322718‑M1/83‑149 (MQ=255)                                                                      tGGCAGCGCGGCGCGACGAGTTTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGC‑AAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCgcc                                                                           >  4:192548/1‑149 (MQ=255)                                                                        gCAGCGCGGCGCGACGAGTTTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGC‑AAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCgcc                                                                           <  3:132678/147‑1 (MQ=255)                                                                          attcgcgggtcaggcgcggccacagcgcttgccgctgctcaggctcggcgcgttcggccagggccagggcgatgcGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCgg                                                                                       <  4:276421‑M1/59‑1 (MQ=255)                                                                          attcgcgggtcaggcgcggccacagcgcttgccgctgctcaggctcggcgcgttcggccagggccagggcgatgcGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCgg                                                                                       >  3:276421‑M1/76‑134 (MQ=255)                                                                                  gcgACGAGTTTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGC‑AAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCctggccctggcc                                                               <  5:218673/149‑1 (MQ=255)                                                                                     acgaGTTTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGC‑AAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGaa                                                            <  8:91540/149‑1 (MQ=255)                                                                                      cgaGTTTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGC‑AAAGCACCATTTGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAAc                                                           <  4:293850/149‑1 (MQ=255)                                                                                       gaGTTTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGC‑AAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTc                                                                                                    >  5:300400/1‑107 (MQ=255)                                                                                       gaGTTTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGC‑AAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTc                                                                                                    <  6:300400/107‑1 (MQ=255)                                                                                          tttGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGC‑AAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACgcgc                                                       >  7:64675/1‑149 (MQ=255)                                                                                            tGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGC‑AAAGCACGATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCGACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGcc                                                      <  8:64675/148‑1 (MQ=255)                                                                                              gCGTGCTGGCCAAGGACTTCAACAAGATGCGCGCACGCCTGC‑AAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGa                                                    <  7:136623/148‑1 (MQ=255)                                                                                                gTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGCTCCAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGc                                                  <  1:127421/149‑1 (MQ=255)                                                                                                   cTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGC‑AAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGa                                              >  3:175979/1‑149 (MQ=255)                                                                                                   cTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGC‑AAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGa                                              <  8:35774/149‑1 (MQ=255)                                                                                                     ggCCAAGGACTTCAACAAGATGGGCGCACGCCTGC‑AAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGag                                             >  8:282245/1‑148 (MQ=255)                                                                                                      gCCAAGGACTTCAACAAGATGGGCGCACGCCTGC‑AAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGag                                             >  5:188698/1‑147 (MQ=255)                                                                                                         aaGGACTTCAACAAGATGGGCGCACGCCTGC‑AAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCg                                        >  2:137958/1‑149 (MQ=255)                                                                                                           ggACTTCAACAAGATGGGCGCACGCCTGC‑AAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCgg                                       >  4:121927/1‑148 (MQ=255)                                                                                                               ttCAACAAGATGGGCGCACGCCTGC‑AAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAgc                                  >  7:299030/1‑149 (MQ=255)                                                                                                               ttCAACAAGATGGGCGCACGCCTGC‑AAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCAACGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAgc                                  >  8:346996/1‑149 (MQ=255)                                                                                                                 caacaaGATGGGCGCACGCCTGC‑AAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAgcgc                                >  6:356104/1‑149 (MQ=255)                                                                                                                 caacaaGATGGGCGCACGCCTGC‑AAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAgcg                                 <  8:289290/148‑1 (MQ=255)                                                                                                                  aacaaGATGGGCGCACGCCTGC‑AAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGCGCCTGAGCAGCGGCAAGCGCt                               >  7:110416/1‑149 (MQ=255)                                                                                                                    caaGATGGTCGCACGCCTGC‑AAAGCACCAATGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCtgt                             <  6:108142/149‑1 (MQ=255)                                                                                                                    caaGATGGGCGCACGCCTGC‑AAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGc                                                  <  8:249045/128‑1 (MQ=255)                                                                                                                    caaGATGGGCGCACGCCTGC‑AAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGc                                                  >  7:249045/1‑128 (MQ=255)                                                                                                                    caaGATGGGCGCACGCCTGC‑AAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCtgt                             <  1:141108/149‑1 (MQ=255)                                                                                                                    caaGATGGGCGCACGCCTGC‑AAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCtgt                             <  5:356104/149‑1 (MQ=255)                                                                                                                    caaGATGGGCGCACGCCTGC‑AAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCtgt                             >  2:295288/1‑149 (MQ=255)                                                                                                                     aaGATGGGCGCACGCCTGC‑AAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCtgtg                            >  5:110536/1‑149 (MQ=255)                                                                                                                      aGATGGGCGCACGCCTGC‑AAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTgg                           <  3:192548/149‑1 (MQ=255)                                                                                                                           ggCGCACGCCTGC‑AAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGCcgc                       <  5:227745/148‑1 (MQ=255)                                                                                                                            gcgcACGCCTGC‑AAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGCCgcgc                     <  8:187707/149‑1 (MQ=255)                                                                                                                            gcgcACGCCTGC‑AAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGCCgcgc                     <  8:299030/149‑1 (MQ=255)                                                                                                                              gcACGCCTGC‑AAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCAGTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGCCGCGCCt                   <  4:175979/149‑1 (MQ=255)                                                                                                                               cACGCCTGC‑AAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGCCGCGCCTg                  <  7:282245/149‑1 (MQ=255)                                                                                                                                 cGCCTGC‑AAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGCCGCGCCTGAc                >  5:220173/1‑149 (MQ=255)                                                                                                                                             cACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGACAAGCGCTGTGGCCGCGCCTGACCcgcg           <  2:83221/143‑1 (MQ=255)                                                                                                                                             cACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGAGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGACAAGCGCTGTGGCCGCGCCTGACCcgcg           >  1:83221/1‑143 (MQ=255)                                                                                                                                              aCCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGCCGCGCCTGACCCGCGAATGCGa    >  3:128909/1‑149 (MQ=255)                                                                                                                                                cATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGa                                              >  1:206818/1‑105 (MQ=255)                                                                                                                                                cATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGa                                              <  2:206818/105‑1 (MQ=255)                                                                                                                                                cATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGCCGCGCCTGACCCGCGAATGCGAcc  >  3:21643/1‑149 (MQ=255)                                                                                                                                                cATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGCCGCGCCTGACCCGCGAATGCGAcc  >  4:283923/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                TAAGCCGCCTGCGCAGTGCCGTACACGACCTGGGCCAGACCACCTATCAGCAGAACAGCCTGGCACGGCTGGCAGCGCGGCGCGACGAGTTTGGCGTGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGC‑AAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCGCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGCCGCGCCTGACCCGCGAATGCGACC  >  NC_002947/5118759‑5119049

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.