New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	6004601 =	58 (0.960)	4 (0.070)	4/248	NT	7.1%	coding (530/891 nt)	PP_5259	LysR family transcriptional regulator
	?	NC_002947	6004670 =	50 (0.880)					coding (599/891 nt)	PP_5259	LysR family transcriptional regulator

CATTCGCAACGAGATGGAGCCGTTCGCCCTGCTGCAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGCCACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCACCTCGCGCCCGGAGGCCTGGCATGAGTGGTTCCTGGAGCAGGACCTGCAGAGCGTCAGCGCTTACCACGGGCCGCGCTTCGATACGTTCTA  >  NC_002947/6004455‑6004748                                                                                                                                                   |                                                                                                                                                    cttcgccgccaggtagcgcggcaccagcgctaccccgcacccggcctgtgctgcactcaacgccatatagaacgtatcgaagcgcggcccgtggtaagcgctgacgctctgcaggtcctgctccaggaaccactcatgccaggcctCCg                                                                                                                                                   <  2:374210‑M1/3‑1 (MQ=255) cATTCGCAACGAGATGGAGCCGTTCGCCCTGCTGCAAGGCTCGGCTGACGTGGTGGTCTTCTATGGCCAGGGCACCGGGCCGGGGGCCACTTGCGGGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCg                                                                                                                                                   <  4:267797/149‑1 (MQ=255)     gccgccaggtagcgcggcaccagcgctaccccgcacccggcctgtgctgcactcaacgccatatagaacgtatcgaagcgcggcccgtggtaagcgctgacgctctgcaggtcctgctccaggacccactcatgccaggcctCCGGgcg                                                                                                                                               <  6:367777‑M1/7‑1 (MQ=255)     gccgccaggtagcgcggcaccagcgctaccccgcacccggcctgtgctgcactcaacgccatatagaacgtatcgaagcgcggcccgtggtaagcgctgacgctctgcaggtcctgctccaggaaccactcatgccaggcctCCGGgc                                                                                                                                                >  6:137046‑M1/143‑148 (MQ=255)     gccgccaggtagcgcggcaccagcgctaccccgcacccggcctgtgctgcactcaacgccatatagaacgtatcgaagcgcggcccgtggtaagcgctgacgctctgcaggtcctgctccaggaaccactcatgccaggcctCCGGgc                                                                                                                                                >  8:214274‑M1/143‑148 (MQ=255)     cGCAACGAGATGGAGCCGTTCGCCCTGCTGCAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGCCACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGgc                                                                                                                                                <  7:94363/148‑1 (MQ=255)      ccgccaggtagcgcggcaccagcgctaccccgcacccggcctgtgctgcactcaacgccatatagaacgtatcgaagcgcggcccgtggtaagcgctgacgctctgcaggtcctgctcaaggaaccactcatgccaggcctCCGGgcgc                                                                                                                                              <  8:51587‑M1/8‑1 (MQ=255)                ggAGCCGTTCGCCCTGCTGCAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGCCACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCg                                                                                                                                    >  1:344991/1‑149 (MQ=255)                  aGCCGTTCGCCCTGCTGCAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCACGGCACCTGGCCGGGGGCCACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGATCTGCTGGCCGGGCGCCAGCTGGCCGGt                                                                                                                                  >  6:287385/1‑149 (MQ=255)                    ccGTTCGCCCTGCTGCAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGCCACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGc                                                                                                                                <  8:356209/149‑1 (MQ=255)                     cGTTCGCCCTGCGGCAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCCGGGCACCTGGCCGGGGGCCACTTGCGTGGAGTTGTTTCGCGAGGAGGGGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGcc                                                                                                                               <  5:221211/149‑1 (MQ=255)                          gCCCTGCTGCAAGGCTGGGCTGACGTGGTTTTCTTCTATGGCCAGGGCACGTGGCCGGGGGCCACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCgagg                                                                                                                           <  7:50450/148‑1 (MQ=255)                             ctgctgCAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGCCACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCt                                                                                                                       <  2:344991/149‑1 (MQ=255)                               gctgcAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGCCACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTgg                                                                                                                     >  7:122987/1‑149 (MQ=255)                                ctgcAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGCCACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTgg                                                                                                                     <  5:193907/148‑1 (MQ=255)                                 tgcAAGGCTCGGCTGACGTGGTGTTATTCTATGGCCAGGGCACCTGGCCGGGGGCCACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGcc                                                                                                                   >  4:294375/1‑149 (MQ=255)                                  gcAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGCCACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGcc                                                                                                                   >  6:240996/1‑148 (MQ=255)                                   cAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGCCACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGcc                                                                                                                   >  4:188292/1‑147 (MQ=255)                                       gCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGCCACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTg                                                                                                             >  8:225031/1‑149 (MQ=255)                                           ggCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGCCACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGt                                                                                                           <  3:295839/147‑1 (MQ=255)                                           ggCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGCCACTTGCGGGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGt                                                                                                           <  8:32372/147‑1 (MQ=255)                                                aCGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGCCACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGtgctgctg                                                                                                    <  7:225031/149‑1 (MQ=255)                                                   tggtgTTCTTCTATGGCCAGGGCACCTGGCCGGGGGCCACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCa                                                                                                  >  5:58085/1‑148 (MQ=255)                                                        ttcttcTATGGCCAGGGCACCTGGCCGGGGGCCACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCAc                                                                                            <  2:24255/149‑1 (MQ=255)                                                        ttcttcTATGGCCAGGGCACCTGGCCGGGGGCCACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCAc                                                                                            >  2:110535/1‑149 (MQ=255)                                                          cttctATGGCCAGGGCACCTGGCCGGGGGCCACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCAcc                                                                                           <  8:243917/148‑1 (MQ=255)                                                           ttctATGGCCAGGGCACCTGGCCGGGGGCCACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCGGGCCGAGCTGGTGCTGCTGCAAAGCACCTc                                                                                         >  2:135531/1‑149 (MQ=255)                                                             ccccggCCAGGTGCCCTGGCCGGGGGCCACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCACCTcgc                                                                                       >  8:170509/5‑149 (MQ=255)                                                                   ccAGGGCACCTGGCCGGGGGCCACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCACCTCGCGCCCg                                                                                  >  6:278097/1‑148 (MQ=255)                                                                   ccAGGGCACCTGGCCGGGGGCCACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCACCTCGCGCCCg                                                                                  >  5:364153/1‑148 (MQ=255)                                                                       ggCACCTGGCCGGGGGCCACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCACCTCGCGCCCGGAGGc                                                                             >  6:253337/1‑149 (MQ=255)                                                                       aacgtatcgaagtgcggcccgtggtaagcgctgacgctctgcaggtcctgctccaggaaccactcatgccaggcctCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCACCTCGCGCCCgg                                                                                 <  7:48826‑M1/69‑1 (MQ=255)                                                                       aacgtatcgaagtgcggcccgtggtaagcgctgacgctctgcaggtcctgctccaggaaccactcatgccaggcctCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCACCTCGCGCCCgg                                                                                 >  8:48826‑M1/77‑145 (MQ=255)                                                                            cTGGCCGGGGGCCACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCACCTCGCGCCCGGAGGCCTgg                                                                         >  4:149746/1‑148 (MQ=255)                                                                                gcGGGGGCCACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCACCTCGCGCCCGGAGGCCTGGCATGa                                                                    <  3:294375/148‑1 (MQ=255)                                                                                ccGGGGGCCACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCACCTCGCGCCCGGAGGCCTGGCATGa                                                                    <  1:125744/149‑1 (MQ=255)                                                                                ccGGGGGCCACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCACCTCGCGCCCGGAGGCCTGGCATGa                                                                    <  6:58085/149‑1 (MQ=255)                                                                                         ccgtggtaagcgctgacgctctgcaggtcctgctccaggaaccactcatgccaggcctCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCAc                                                                                            <  2:299532‑M1/58‑1 (MQ=255)                                                                                         ccgtggtaagcgctgacgctctgcaggtcctgctccaggaaccactcatgccaggcctCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCAc                                                                                            >  1:299532‑M1/59‑116 (MQ=255)                                                                                           ttGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCACCTCGCGCCCGGAg                                                                               >  1:143303/1‑127 (MQ=255)                                                                                           ttGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCACCTCGCGCCCGGAg                                                                               <  2:143303/127‑1 (MQ=255)                                                                                           ttGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCACCTCGCGCCCGGAGGCCTGGCATGAGTGGTTCCTgg                                                         <  8:122987/149‑1 (MQ=255)                                                                                             gCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCACCTCGCGCCCGGAGGCCTGGCATGAGTGGTTCCTGGAg                                                       >  4:228949/1‑149 (MQ=255)                                                                                              cGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCACCTCGCGCCCGGAGGCCTGGCATGAGTGGTTCCTGGAg                                                       <  6:364153/148‑1 (MQ=255)                                                                                               gTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCACCTCGCGCCCGGa                                                                                >  8:127901/1‑122 (MQ=255)                                                                                               gTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCACCTCGCGCCCGGa                                                                                <  7:127901/122‑1 (MQ=255)                                                                                               gTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCACCTCGCGCCCGGAGGCCTGGCATGAGTGGTTCCTGGAg                                                       >  8:335550/1‑147 (MQ=255)                                                                                                  gAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCACCTCGCGCCCGGAGGCCTGGCATGAGTGGTTCATGGAGCAGGa                                                  >  3:170535/1‑149 (MQ=255)                                                                                                    gttgttTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCACCTCGCGCCCGGAGGCCTGGCATGAGTGGTTCCTGGAGCAGGAcc                                                <  5:278097/149‑1 (MQ=255)                                                                                                      tgttTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCACCTCGCGCCCGGAGGCCTGGCATGAGTGGTTCCTGGAGCAGGACCTg                                              >  3:315318/1‑149 (MQ=255)                                                                                                       gttTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCACCTCGCGCCCGGAGGCCTGGCATGAGTGGTTCCTGGAGc                                                      <  6:378034/140‑1 (MQ=255)                                                                                                       gttTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCACCTCGCGCCCGGAGGCCTGGCATGAGTGGTTCCTGGAGc                                                      >  5:378034/1‑140 (MQ=255)                                                                                                        tttCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCACCTCGCGCCCGGAGGCCTGGCATGAGTGGTTCCTGGAGCAGGACCTg                                              >  3:147990/1‑147 (MQ=255)                                                                                                            gcgAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCACCTCGCGCCCGGAGGCCTGGCATGAGTGGTTCCt                                                           <  2:251136/130‑1 (MQ=255)                                                                                                            gcgAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCACCTCGCGCCCGGAGGCCTGGCATGAGTGGTTCCt                                                           >  1:251136/1‑130 (MQ=255)                                                                                                                ggaggTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCTGAGCTGGTGCTGCTGCAAAGCACCTCGCGCCCGGAGGCCTGGCATGAGTGGTTCCTGGAGCAGGACCTGCAGAGCGTCa                                    <  5:193034/149‑1 (MQ=255)                                                                                                                     tggtgCCGGTGTCTGCGCCAGAGCTGCTGGCCCTGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTCGTGCTCCTGCAAAGCACCTCGAGCCCGGAGGACTCGCATGAGTGGTTCCTGGAGCAGGACCTGCAGAGCGTCAgcgc                                >  3:225975/1‑148 (MQ=255)                                                                                                                      ggtgCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCACCTCGCGCCCGGAGGCCTGGCATGAGTGGTTCCTGGAGCAGGACCTGCAGAGCGTCAGCGCt                               >  8:326109/1‑148 (MQ=255)                                                                                                                            ggTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCACCTCGCGCCCGGAGGCCTGGCATGAGTGGTTCCTGGAGCAGGACCTGCAGAGCGTCAGCGCTTACCACg                        <  4:315318/149‑1 (MQ=255)                                                                                                                             gtgtgtGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCACCTCGCGCCCGGAGGCCTGGCATGa                                                                    >  8:257498/1‑104 (MQ=255)                                                                                                                                tgtgCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCACCTCGCGCCCGGAGGCCTGGCATGAGTGGTTCCTGGAGCAGGACCTGCAGAGCGTCAGCGCTTACCACGGGc                     <  3:228949/148‑1 (MQ=255)                                                                                                                                 gtgCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCACCTCGCGCCCGGAGGCCTGGCATGAGTGGTTCCTGGAGCAGGACCTGCAGAGCGTCAGCGCTTACCACGGGCcg                   >  5:384218/1‑149 (MQ=255)                                                                                                                                  tgCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCACCTCGCGCCCGGAGGCCTGGCATGAGTGGTTCCTGGAGCAGGACCTGCAGAGCGTCAGCGCTTACCACGGGCcgc                  >  3:331364/1‑149 (MQ=255)                                                                                                                                       cAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCACCTCGCGCCCGGAGGCCTGGCATGAGTGGTTCCTGGAGCAGGACCTGCAGAGCGTCAGCGCTTACCACGGGCCGCGCTTc             <  6:384218/149‑1 (MQ=255)                                                                                                                                          agCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCACCTCGCGCCCGGAGGCCTGGCATGAGTGGTTCCTGGAGCAGGACCTGCAGAGCGTCAGCGCTTACCACGGGCCGCGCTTCGa           >  6:332012/1‑148 (MQ=255)                                                                                                                                          agCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCACCTCGCGCCCGGAGGCCTGGCATGAGTGGTTCCTGGAGCAGGACCTGCAGAGCGTCAGCGCTTACCACGGGCCGCGCTTCGAt          <  3:188292/149‑1 (MQ=255)                                                                                                                                            ctgctgGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCACCTCGCGCCCGGAGGCCTGGCATGAGTGGTTCCTGGAGCAGGACCTGCAGAGCGTCAGCGCTTACCACGGGCCGCGCTTCGATAc        <  5:332012/149‑1 (MQ=255)                                                                                                                                            ctgctgGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCACCTAGCGCCCGGAGGCCTGGCATGAGTGGTTCCTGGAGCAGGACCTGCAGAGCGTCAGCGCTTACCACGGGCCGCGCTTCGATAc        <  4:170535/149‑1 (MQ=255)                                                                                                                                               ctgGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCACCTCGCGCCCGGAGGCCTGGCATGAGTGGTTCCTGGAGCAGGACCTGCAGAGCGTCAGCGCTTACCACGGGCCGCGCTTCGATACGt      <  5:240996/148‑1 (MQ=255)                                                                                                                                                  gCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCACCTCGCGCCCGGAGGCCTGGCATGAGTGGTTCCTGGAGCAGGACCTGCAGAGCGTCAGCGCTTACCTCGGGCCGCGCTTCGATACGTTCta  <  7:234678/149‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                    CATTCGCAACGAGATGGAGCCGTTCGCCCTGCTGCAAGGCTCGGCTGACGTGGTGTTCTTCTATGGCCAGGGCACCTGGCCGGGGGCCACTTGCGTGGAGTTGTTTCGCGAGGAGGTGGTGCCGGTGTGTGCGCCAGAGCTGCTGGCCGGGCGCAAGCTGGCCGGTGCCGAGGAGCTGGCCGAGCTGGTGCTGCTGCAAAGCACCTCGCGCCCGGAGGCCTGGCATGAGTGGTTCCTGGAGCAGGACCTGCAGAGCGTCAGCGCTTACCACGGGCCGCGCTTCGATACGTTCTA  >  NC_002947/6004455‑6004748

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.