New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1155357 =	56 (0.930)	4 (0.070)	4/254	NT	7.2%	coding (515/1455 nt)	PP_1013	sensor histidine kinase
	?	NC_002947	1155440 =	49 (0.850)					coding (598/1455 nt)	PP_1013	sensor histidine kinase

CCTCAAACTCGACGAGCTGCCGCGCTCATGGGCCCATTATTCGCTGACCTTGGAGCCGCTGAAACCCCCGGTACTGGTCACGCAGATCCGCTTGGGCGAGGGCGAATGGTTGTACATCGCCTCGCTGTTGCCCGAACCGTACACGGGGCTGGAAGCCGAACGCCTGCCGCGCCAGCAGATCGGCTTCATCGTGCTGACCACGGCCTTGCTGTTGCTGTTCATCGGCTTGCTGGTGCACTGGCAAAGCTGGCCACTGAAGCGCCTGGCGCGGGCCGCCCGAGAGATGTCGCTGGGTGC  >  NC_002947/1155292‑1155588                                                                                                                                                     |                                                                                                                                                     ccTCAAACTCGACGAGCTGCCGCGCTCATGGGCCCATTATTCGCTGACGTTGGAGCCGCTGAAACCCCCGGTACTGGTCACGCAGATCCGCTTGGGCGAGGGCGAATGGTTGTACATCGCCTCGCTGTTGCCCGAACCGTACACGGGGc                                                                                                                                                      <  6:132351/149‑1 (MQ=255) acccgcaaggccgtgggcagcacgatgaagccgatctgctggcgcggcaggcgttcggcttccagCCCCGGTACTGGTCACGCAGATCCGCTTGGGCGAGGGCGAATGGTTGTACATCGCCTCGCTGTTGCCCGAACCGTACACGGGGc                                                                                                                                                      >  4:224869‑M1/66‑149 (MQ=255)      aaCTCGACGAGCTGCCGCGCTCATGGGCCCATTATTCGCTGACCTTGGAGCCGCTGAAACCCCCGGTACTGGTCACGCAGATCCGCTTGGGCGAGGGCGAATGGTTGTACATCGCCTCGCTGTTGCCCGAACCGTACACGGGGCTGGaa                                                                                                                                                 <  2:219354/149‑1 (MQ=255)        cTCGACGAGCTGCCGCGCTCATGGGCCCATTATTCGCTGACCTTGGAGCCGCTGAAACCCCCGGTACTGGTCACGCAGATCCGCTTGGGCGAGGGCGAATGGTTGTACATCGCCTCGCTGTTGCCCGAACCGTACACGGGGCTGGAAGc                                                                                                                                               <  3:92987/149‑1 (MQ=255)         tCGACGAGCTGCCGCGCTCATGGGCCCATTATTCGCTGACCTTGGAGCCGCTGAAACCCCCGGTACTGGTCACGCAGATCCGCTTGGGCGAGGGCGAATGGTTGTACATCGCCTCGCTGTTGCCCGAACCGTACACGGGGCTGGAAGcc                                                                                                                                              >  4:41193/1‑149 (MQ=255)                     cgcgCTCATGGGCCCATTATTCGCTGACCTTGGAGCCGCTGAAACCCCCGGTACTGGTCACGCAGATCCGCTTCGGCGAGGGCGAATGGTTGTACATCGCCTCGCTGTTGCCCGAACCGTACACGGGGCTGGAAGCCGAACGCCTGcct                                                                                                                                  >  3:55825/1‑148 (MQ=255)                            aTGGGCCCATTATTCGCTGACCTTGGAGCCGCTGAAACCCCCGGTACTGGTCACGCAGATCCGCTTGGGCGAGGGCGAATGGTTGTACATCGCCTCGCTGTTGCCCGAACCGTACACGGGGCTGGAAGCCGAACGCCTGCCGCGCcagc                                                                                                                           <  2:237974/149‑1 (MQ=255)                              gggCCCATTATTCGCTGACCTTGGAGCCTCTGAAACCCCCGGTACTGGTCACGCAGATCCGCTTGGGCGAGGGCGAATGGTTGTACATCGCCTCGCTGTTGCCCGAACTGTACACGGGGCTGGAAGCCGAACGCCTGCCGCGCcag                                                                                                                            >  1:47772/1‑146 (MQ=255)                                 cccATTATTCGCTGACCTTGGAGCCGCTGAAACCCCCGGTACTGGTCACGCAGATCCGCTTGGGCGAGGGCGAATGGTTGTACATCGCCTCGCTGTTGCCCGAACCGTACACGGGGCTGGAAGCCg                                                                                                                                             <  7:41334/126‑1 (MQ=255)                                 cccATTATTCGCTGACCTTGGAGCCGCTGAAACCCCCGGTACTGGTCACGCAGATCCGCTTGGGCGAGGGCGAATGGTTGTACATCGCCTCGCTGTTGCCCGAACCGTACACGGGGCTGGAAGCCg                                                                                                                                             >  8:41334/1‑126 (MQ=255)                                  ccATTATTCGCTGACCTTGGAGCCGCTGAAACCCCCGGTACTGGTCACGCAGATCCGCTTGGGCGAGGGCGAATGGTTGTACATCGCCTCGCTGTTGCCCGAACCGTACACGGGGCTGGAAGCCGAACGCCTGCCGCGCcag                                                                                                                            >  7:147097/1‑142 (MQ=255)                                   cATTATTCGCTGACCTTGGAGCCGCTGAAACCCCCGGTACTGGTCACGCAGATCCGCTTGGGCGAGGGCGAATGGTTGTACATCGCCTCGCTGTTGCCCGAACCGTACACGGGGCTGGAAGCCGAACGCCTGCCGCGCCAGCAGATCgg                                                                                                                    >  1:217350/1‑149 (MQ=255)                                    attattCGCTGACCTTGGAGCCGCTGAAACCCCCGGTACTGGTCACGCAGATCCGCTTGGGCGAGGGCGAATGGTTGTACATCGCCTCGCTGTTGCCCGAACCGTACACGGGGCTGGAAGCCGAACGCCTGCCGCGCCAGCAGATCGGc                                                                                                                   <  2:217350/149‑1 (MQ=255)                                    aatattCGCTGACCTTGGAGCCGCTGAAACCCCCGCTACTGGTCACGCAGATCCCCTAGGGCGAGGGCGAATGGTTGTACATCGCCTCGCTGTTGCCCCAACCGTACAAGGGGCTGGAAGCCTAACGCCTGCCGCGCGAGCAGATCGGc                                                                                                                   >  4:21627/3‑149 (MQ=255)                                           gCTGACCTTGGAGCCGCTGAAACCCCCGGTACTGGTCACGCAGATCCGCTTGGGCGAGGGCGAATGGTTGTACATCGCCTCGCTGTTGCCCGAACCGTACACGGGGCTGGAAGCCGAACGCCTGCCGCGCCAGCAGATCGGCTTCATCg                                                                                                            >  2:244918/1‑149 (MQ=255)                                           gCTGACCTTGGAGCCGCTGAAACCCCCGGTACTGGTCACGCAGATCCGCTTGGGCGAGGGCGAATGGTTGTACATCGCCTCGCTGTTGCCCGAACCGTACACGGGGCTGGAAGCCGAACGCCTGCCGCGCCAGCAGATCGGCTTCATCg                                                                                                            <  4:266188/149‑1 (MQ=255)                                           gCTGACCTTGGAGCCGCTGAAACCCCCGGTACTGGGCACGGATATCCGCTTGGGCGAGGGCGAATGGTTGTACATCGCCTCGCTGTTGCCCGAACCGTACACGGGGCTGGAAGCCGAACGCCTGCCGCGCCAGCAGATCGGCTTCATc                                                                                                             <  1:42057/148‑1 (MQ=255)                                                  ttGGAGCCGCTGAAACCCCCGGTACTGGTCACGCAGATCCGCTTGGGCGAGGGCGAATGGTTGTACATCGCCTCGCTGTTGCCCGAACCGTACACGGGGCTGGAAGCCGAACGCCTGCCGCGCCAGCAGATCGGCTTCATCGTGCTGAc                                                                                                     >  3:102671/1‑149 (MQ=255)                                                        ccGCTGAAACCCCCGGTACTGGTCACGCAGATCCGCTTGGGCGAGGGCGAATGGTTGTACATCGCCTCGCTGTTGCCCGAACCGTACACGGGGCTGGAAGCCGAACGCCTGCCGCGCCAGCAGATCGGCTTCATCGTGCTGACCACGGc                                                                                               <  2:111678/149‑1 (MQ=255)                                                          gCTGAAACCCCCGGTACTGGTCACGCAGATCCGCTTGGGCGAGGGCGAATGGTTGTACATCGCCTCGCTGTTGCCCGAAGCGTACACGGGGCTGGAAGCCGAACGCCTGCCGCGCCAGCAGATCGGCTTCATCGTGCTGACCACGGCCt                                                                                             >  8:133592/1‑149 (MQ=255)                                                           cTGAAACCCCCGGTACTGGTCACGCAGATCCGCTTGGGCGAGGGCGAATGGTTGTACATCGCCTCGCTGTTGCCCGAACCGTACACGGGGCTGGAAGCCGAACGCCTGCCGCGCCAGCAGATCGGCTTCATCGTGCTGACCACGGCCtt                                                                                            >  8:576/1‑149 (MQ=255)                                                                 gccccgtgtacggttcgggcaacagcgaggcgatgtacaaccattcgccctcgcccaagcggatctgcgtgaccagtaccggggCTGGAAGCCGAACGCCTGCCGCGCCAGCAGATCGGCTTCATCGTGCTGCCCACggccttgcgggt                                                                                      >  4:224869‑M2/85‑145 (MQ=255)                                                                 cccccGGTACTGGTCACGCAGATCCGCTTGGGCGAGGGCGAATGGTTGTACATCGCCTCGCTGTTGCCCGAACCGTACACGGGGCTGGAAGCCGAACGCCTGCCGCGCCAGCAGATCGGCTTCATCGTGCTGACCACGGCCttgctgtt                                                                                      <  1:244918/149‑1 (MQ=255)                                                                  ccccgtgtacggttcgggcaacagcgaggcgatgtacaaccattcgccctcgcccaagcggatctgcgtgaccagtaccggggCTGGAAGCCGAACGCCTGCCGCGCCAGCAGATCGGCTTCATCGTGCTGACCACGGCCttgctgttg                                                                                     >  8:217951‑M2/84‑149 (MQ=255)                                                                   CCCGGTACTGGTCACGCAGATCCGCTTGGGCGAGGGCGAATGGTTGTACATCGCCTCGCTGTTGCCCGAACCGTACACGGGGCTGGAAGCCGAACGCCTGCCGCGCCAGCAGATCGGCt                                                                                                                  >  4:197453‑M1/1‑119 (MQ=255)                                                                   CCCGGTACTGGTCACGCAGATCCGCTTGGGCGAGGGCGAATGGTTGTACATCGCCTCGCTGTTGCCCGAACCGTACACGGGGCTGGAAGCCGAACGCCTGCCGCGCCAGCAGATCGGCt                                                                                                                  <  3:197453‑M1/119‑1 (MQ=255)                                                                   CCCGGTACTGGTCACGCAGATCCGCTTGGGCGAGGGCGAATGGGTGTACATCGCCTCGCTGTTGCCCGAACCGTACACGGGGCTGGAAGCCGAACGCCTGCCGCGCCAGCAGATCGGCTTCATCGTGCTGACCACGGCCttgctgttgc                                                                                    >  5:292178‑M1/1‑149 (MQ=255)                                                                          cTGGTCACGCAGATCCGCTTGGGCGAGGGCGAATGGTTGTACATCGCCTCGCTGTTGCCCGAACCGTACACGGGGCTGGAAGCCGAACGCCTGCCGCGCCAGCAGATCGGCTTCATCGTGCTGACCACGGCCTTGCTGTTGCTGTTCAt                                                                             <  4:102671/149‑1 (MQ=255)                                                                           tGGTCACGCAGATCCGCTTGGGCGAGGGCGAATGGTTGTACATCGCCTCGCTGTTGCCCGAACCGTACACGGGGCTGGAAGCCGAACGCCTGCCGCGCCAGCAGATCGGCTTCATCGTGCTGACCACGGCCTTGCTGTTGCTGTTCATc                                                                            >  4:41598/1‑149 (MQ=255)                                                                           cggttcgggcaacagcgaggcgatgtacaaccattcgccctcgcccaagcggatctgcgtgaccagtaccggggCTGGAAGCCGAACGCCTGCCGCGCCAGCAGATCGGCTTCATCGTGCTGACCACGGCCTTGCTGTTGCTGTTCATc                                                                            <  7:217951‑M2/75‑1 (MQ=255)                                                                             gTCACGCAGATCCGCTTGGGCGAGGGCGAATGGTTGTACATCGCCTCGCTGTTGCCCGAACCGTACACGGGGCTGGAAGCCGAACGCCTGCCGCGCCAGCAGATCGGCTTCATCGTGCTGACCACGGCCTTGCTGTTGCTGTTCATc                                                                            <  3:41193/147‑1 (MQ=255)                                                                             gTCACGCAGATCCGCTTGGGCGAGGGCGAATGGTTGTACATCGCCTCGCTGTTGCCCGAACCGTACACGGGGCTGGAAGCCGAACGCCTGCCGCGCCAGCAGATCGGCTTCATCGTGCTGACCACGGCCTTGCTGTTGCTGTTCATCgg                                                                          >  6:201510/1‑149 (MQ=255)                                                                                  gCAGATCCGCTTGGGCGAGGGCGAATGGTTGTACATCGCCTCGCTGTTGCCCGAACCGTACACGGGGCTGGAAGCCGAACGCCTGCCGCGCCAGCAGATCGGCTTCATCGTg                                                                                                          <  6:207150/112‑1 (MQ=255)                                                                                  gCAGATCCGCTTGGGCGAGGGCGAATGGTTGTACATCGCCTCGCTGTTGCCCGAACCGTACACGGGGCTGGAAGCCGAACGCCTGCCGCGCCAGCAGATCGGCTTCATCGTg                                                                                                          >  5:207150/1‑112 (MQ=255)                                                                                  gCAGATCCGCTTGGGCGAGGGCGAATGGTTGTACATCGCCTCGCTGTTGCCCGAACCGTACACGGGGCTGGAAGCCGAACGCCTGCCGCGCCAGCAGATCGGCTTCATCGTGCTGACCACGGCCTTGCTGTTGCTGTTCATCGGCTTGc                                                                     >  7:315027/1‑149 (MQ=255)                                                                                  gCAGATCCGCTTGGGCGAGGGCGAATGGTTGTACATCGCCTCGCTGTTGCCCGAACCGTACACGGGGCTGGAAGCCGAACGCCTGCCGCGCCAGCAGATCGGCTTCATCGTGCTGACCACGGCCTTGCTGTTGCTGTTCATCGGCTTGc                                                                     >  4:112992/1‑149 (MQ=255)                                                                                  gCAGATCCGCTTGGGCGAGGGCGAATGGTTGTACATCGCCTCGCTGTTGCCCGAACCGTACACGGGGCTGGAAGCCGAACGCCTGCCGCGCCAGCAGATCGGCTTCATCGTGCTGACCACGGCCTTGCTGTTGCTGTTCATCGGCTTGc                                                                     >  3:86920/1‑149 (MQ=255)                                                                                     gATCCGCTTGGGCGAGGGCGAATGGTTGTACATCGCCTCGCTGTTGCCCGAACCGTACACGGGGCTGGaa                                                                                                                                                 >  1:380249/1‑70 (MQ=255)                                                                                     gATCCGCTTGGGCGAGGGCGAATGGTTGTACATCGCCTCGCTGTTGCCCGAACCGTACACGGGGCTGGaa                                                                                                                                                 <  2:380249/70‑1 (MQ=255)                                                                                           cTTGGGCGAGGGCGAATGGTTGTACATCGCCTCGCTGTTGCCCGAACCGTACACGGGGCTGGAAGCCGAACGCCTGCCGCGCCAGCAGATCGGCTTCATCGTGCTGACCACGGCCTTGCTGTTGCTGTTCATCGGCTTGCTGGTGCACt                                                            <  7:576/149‑1 (MQ=255)                                                                                                gcgagggcgaATGGTTGTACATCGCCTCGCTGTTGCCCGAACCGTACACGGGGCTGGAAGCCGAACGCCTGCCGCGCCAGCAGATCGGCTTCATCGTGCTGACCa                                                                                                   >  4:242677/1‑105 (MQ=255)                                                                                                gcgagggcgaATGGTTGTACATCGCCTCGCTGTTGCCCGAACCGTACACGGGGCTGGAAGCCGAACGCCTGCCGCGCCAGCAGATCGGCTTCATCGTGCTGACCa                                                                                                   <  3:242677/105‑1 (MQ=255)                                                                                                gcgagggcgaATGGTTGTACATCGCCTCGCTGTTGCCCGAACCGTACACGGGGCTGGAAGCCGAACGCCTGCCGCGCCAGCAGATCGGCTTCATCGTGCTGACCACGGCCTTGCTGTTGCTGTTCATCGGCTTGCTGGTGCACTGGCa                                                        >  7:176045/1‑148 (MQ=255)                                                                                                  gagggcgaATGGTTGTACATCGCCTCGCTGTTGCCCGAACCGTACACGGGGCTGGAAGCCGAACGCCTGCCGCGCCAGCAGATCGGCTTCATCGTGCTGACCACGGCCTTGCTGTTGCTGTTCATCGGCTTGCTGGTGCACTGGCAAAg                                                     >  1:30586/1‑149 (MQ=255)                                                                                                     ggcgaATGGTTGTACATCGCCTCGCTGTTGCCCGAACCGTACACGGGGCTGGAAGCCGAACGCCTGCCGCGCCAGCAGATCGGCTTCATCGTGCTGACCACGGCCTTGCTGTTGCTGTTCATCGGCTTGCTGGTGCACTGGCAAAGCTg                                                  >  5:35427/1‑149 (MQ=255)                                                                                                            ttcgccctcgcccaagctgatctgcgtgaccagtaccgtggCTGGAAGCCGAACGCCTGCCGCGCCAGCAGATCGGCTTCATCGTGCTGACCACGGCCTTGCTGTTGCTGTTCATCGGCTTGCTGGTGCACTGGCAAAGCTGGCCACTg                                           <  3:224869‑M2/108‑1 (MQ=255)                                                                                                              ttGTACATCGCCTCGCTGTTGCCCGAACCGTACACGGGGCTGGAAGCCGAACGCCTGCCGCGCCAGCAGATCGGCTTCATCGTGCTGACCACGGCCTTGCTGTTGCTGTTCATCGGCTTGCTGGTGCACTGGCAAAGCTGGCCACTGaa                                         <  6:35427/149‑1 (MQ=255)                                                                                                                         cTCGCTGTTGCCCGAACCGTACACGGGGCTGGAAGCCGAACGCCTGCCGCGCCAGCAGATCGGCTTCATCGTGCTGACCACGGCCTTGCTGTTGCTGTTCATCGGCTTGCTGGTGCACTGGCAAAGCTGGCCACTGAAGCGCCTGgcgc                              >  3:49495/1‑149 (MQ=255)                                                                                                                           cGCTGTTGCCCGAACCGTACACGGGGCTGGAAGCCGAACGCCTGCCGCGCCAGCAGATCGGCTTCATCGTGCTGACCACGGCCTTGCTGTTGCTGTTCATCGGCTTGCTGGTGCACTGGCAAAGCTGGCCACTGAAGCGCCTGGCGCgg                            <  5:201510/149‑1 (MQ=255)                                                                                                                           cGCTGTTGCCCGAACCGTACACGGGGCTGGAAGCCGAACGCCTGCCGCGCCAGCAGATCGGCTTCATCGTGCTGACCACGGCCTTGCTGTTGCTGTTCATCGGCTTGCTGGTGCACTGGCAAAGCTGGCCACTGAAGCGCCTGGCGCgg                            <  8:315027/149‑1 (MQ=255)                                                                                                                              tGTTGCCCGAACCGTACACGGGGCTGGAAGCCGAACGCCTGCCGCGCCAGCAGATCGGCTTCATCGTGCTGACCACGGCCTTGCTGTTGCTGTTCATCGGCTTGCTGGTGCACTGGCAAAGCTGGCCACTGAAGCGCCTGGCGCGGgcc                         >  6:333165/1‑149 (MQ=255)                                                                                                                                    ccGAACCGTACACGGGGCTGGAAGCCGAACGCCTGCCGCGCCAGCAGATCGGCTTCATCGTGCTGACCACGGCCTTGCTGTTGCTGTTCATCGGCTTGCTGGTGCACTGGCAAAGCTGGCCACTGAAGCGCCTGGCGCGGGCCGccc                     >  2:22873/1‑147 (MQ=255)                                                                                                                                    ccGAACCGTACACGGGGCTGGAAGCCGAACGCCAGCCGCGCCAGCAGATCGGCTTCATCGTGCTGACCACGGCCTTGCTGTTGCTGTTCATCGGCTTGCTGGTGCACTGGCAAAGCTGGCCACTGAAGCGCCTGGCGCGGGCCGCCCga                   >  1:49849/1‑149 (MQ=255)                                                                                                                                     cGAACCGTACACGGGGCTGGAAGCCGAACGCCTGCCGCGCCAGCAGATCGGCTTCATCGTGCTGCCGACGGCCTTGCTGTTGCTGTTCATCGGCTTGCTGGTGCACTGGCAAAGCTGGCCACTGATGCGCGTGGCGCGGGCCGCGCgag                  >  2:347946/1‑149 (MQ=255)                                                                                                                                     cGAACCGTACACGGGGCTGGAAGCCGAACGCCTGCCGCGCCAGCAGATCGGCTTCATCGTGCTGACCACGGCCTTGCTGTTGCTGTTCATCGGCTTGCTGGTGCACTGGCAAAGCTGGCCACTGAAGCGCCTGGCGCGGGCCGccc                     >  3:280626/1‑146 (MQ=255)                                                                                                                                      gAACCGTACACGGGGCTGGAAGCCGAACGCCTGCCGCGCCAGCAGATCGGCTTCATCGTGCTGACCACGGCCTTGCTGTTGCTGTTCATCGGCTTGCTGGTGCACTGGCAAAGCTGGCCACTGAAGCGCCTGGCGCGGGCCGCCCgaga                 <  3:112992/149‑1 (MQ=255)                                                                                                                                         ccGTACACGGGGCTGGAAGCCGAACGCCTGCCGCGCCAGCAGATCGGCTTCATCGTGCTGACCACGGCCTTGCTGTTGCTGTTCATCGGCTTGCTGGTGCACTGGCAAAGCTGGCCACTGAAGCGCCTGGCGCGGGCCGCCCGAGAGAt              <  1:22873/149‑1 (MQ=255)                                                                                                                                          cGTACACGGGGCTGGAAGCCGAACGCCTGCCGCGCCAGCAGATCGGCTTCATCGTGCTGACCACGGCCTTGCTGTTGCTGTTCATCGGCTTGCTGGTGCACTGGCAAAGCTGGCCACTGAAGCGCCTGGCGCGGGCCGCCCGAGAGATg             >  8:100488/1‑149 (MQ=255)                                                                                                                                           gTACACGGGGCTGGAAGCCGAACGCCTGCCGCGCCAGCAGATCGGc                                                                                                                   <  2:272352/46‑1 (MQ=255)                                                                                                                                           gTACACGGGGCTGGAAGCCGAACGCCTGCCGCGCCAGCAGATCGGc                                                                                                                   >  1:272352/1‑46 (MQ=255)                                                                                                                                             acacGGGGCTGGAAGCCGAACGCCTGCCGCGCCAGCAGATCGGCTTCATCGTGCTGACCACGGCCTTGCTGTTGCTGTTCATCGGCTTGCTGGTGCACTGGCAAAGCTGGCCACTGAAGCGCCTGGCGCGGGCCGCCCGAGAGATGTCg          >  7:263753/1‑149 (MQ=255)                                                                                                                                                 ggggCTGGAAGCCGAACGCCTGCCGCGCCAGCAGATCGGCTTCATCGTGCTGACCACGGCCTTGCTGTTGCTGTTCATCGGCTTGCTGGTGCACTGGCAAAGCTGGCCACTGAAGCGCCTGGCGCGGGCCGCCCGAGAGATGTCGCTgg      >  1:44098‑M2/5‑149 (MQ=255)                                                                                                                                                  gggCTGGAAGCCGAACGCCTGCCGCGCCAGCAGATCGGCTTCATCGTGCTGACCACGGCCTTGCTGTTGCTGTTCATCGGCTTGCTGGTGCACTGGCAAAGCTGGCCACTGAAGCGCCTGGCGCGGGCCGCCCGAGAGATGTCGCTggg     >  5:234181‑M2/4‑149 (MQ=255)                                                                                                                                                     cTGGAAGCCGAACGCCTGCCGCGCCAGCAGATCGGCTTCATCGTGCTGACCACGGCCTTGCTGTTGCTGTTCATCGGCTTGCTGGTGCACTGGCAAAGCTGGCCACTGAAGCGCCTGGCGCGGGCCGCCCGAGAGATGTCGCTGGGTGc  >  7:116109/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                     CCTCAAACTCGACGAGCTGCCGCGCTCATGGGCCCATTATTCGCTGACCTTGGAGCCGCTGAAACCCCCGGTACTGGTCACGCAGATCCGCTTGGGCGAGGGCGAATGGTTGTACATCGCCTCGCTGTTGCCCGAACCGTACACGGGGCTGGAAGCCGAACGCCTGCCGCGCCAGCAGATCGGCTTCATCGTGCTGACCACGGCCTTGCTGTTGCTGTTCATCGGCTTGCTGGTGCACTGGCAAAGCTGGCCACTGAAGCGCCTGGCGCGGGCCGCCCGAGAGATGTCGCTGGGTGC  >  NC_002947/1155292‑1155588

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.