| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1311707 = | 49 (0.810) | 8 (0.150) | 8/238 | NT | 14.4% | intergenic (‑175/+103) | PP_1144/rapA | membrane protein/RNA polymerase‑associated protein RapA |
| ? | NC_002947 | 1311792 = | 51 (0.940) | intergenic (‑260/+18) | PP_1144/rapA | membrane protein/RNA polymerase‑associated protein RapA | |||||
CTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTCGATTTCGCTGTCACGCACACTTGGGTTGACCGCTTGC > NC_002947/1311646‑1311939 | cTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCCCCAAGCAAAAACAGCGGTGGAATCCACCCGCATTTGCGGTTTTACAGGGCGTGCCCCCACACACaaag > 8:145804/1‑147 (MQ=255)cTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGGGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAg < 4:34251/148‑1 (MQ=255) cctggaagccattcgcgtgctggtggctggctagcgcaggccccgcgccccttgtgggagcgggcacgcccgcgaacaccggcaaagccggtggcctccgcggcaggggctgcttcgcgggctcgcgcgcgcgcgcagg‑ggggcagtag > 8:271065‑M2/138‑142 (MQ=255) gTTATATCTCCAATCGCTGTGAGGAATAAATTTGGGGCCCTAAGGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAG‑GGGC‑GCGGGGc < 1:267048/149‑1 (MQ=255) aaaaCTCCAAGCCCAGTGAGCAATAAATTGGGGGCCCTACTCCCTTCCTGGGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAG‑GGGC‑GCGGGGCCTg < 3:137466/147‑1 (MQ=25) taACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAG‑GGGC‑GCGGGGCCTgc < 1:143927/149‑1 (MQ=255) tCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCCAAGCATACACTGCGGTGGATTCCACCGGCTTTGACGGTGTTAGAGGGCGTTCCCCCTCACCCAAA‑GGGC‑GCGGGGGCTGCGCTa > 4:48971/1‑149 (MQ=255) tCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCCCCCACCAAACACAGCGGGGGGTTCCCCCCGCGTGTCCGGGGTGTGCGGGGGTGGCCGCCCCCCCCAA‑GGGG‑GCgggggccggcc > 5:313343/1‑140 (MQ=255) cAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATGCACTTCGGTGGATTCCACCCCGTTTGCCGGTGTTAGCGGGCGTGCCCCCACCCCCAAC‑GGGC‑GCGGGGCCTGCCCTagc > 5:116804/1‑149 (MQ=255) cAAGCGCCGTGACGAATAAATTTGGGGCCCTAATGCCTTCCTGGGGGCGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAG‑GGGC‑GCGGGGCCTGCGCTagc < 7:145804/149‑1 (MQ=37) aaTCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAG‑GGGC‑GCGGGGCCTGCGCTagcc < 3:224399/149‑1 (MQ=255) aaTCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCCCCCACCAAACACAGCGGGGGGTGCCACCCGCATTTCCCGTGATAGAGGGGGTGCCCCCAACCCCAAA‑CGGC‑GCGGGGCCAGCGCTagc > 8:316420/1‑148 (MQ=255) aTCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAG‑GGGC‑GCGGGGCCTGCGCTagcca < 7:291531/149‑1 (MQ=255) aTCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAG‑GGGC‑GCGGGGCCTGCGCTagcca < 4:318729/149‑1 (MQ=255) tCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGCAACAACCCCGGGGGGGGATGCCCCCCGCGTTGCCGGTGTTCGCGGGCGTGGCCCCGCCCCCCAG‑GGGG‑GCGGGGCCGGGGCGagcccg > 8:316134/1‑147 (MQ=255) cggCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAG‑GGGC‑GCGGGGCCTGCGCTagcca < 5:145069/146‑1 (MQ=255) gCAGTGAGGAATAAATTTGGGGGCTTAATGCCTTCCTGTGGGAGCGGGCTAGCCCGCGAAGCATCCAGTGCGGTGGATGCCACGGGCTTTGTCGGTGTTCGGGGTCGTGGCCGCTCCCACAAG‑GGGC‑GCGGGGCCTGCGCTagccagc < 6:116804/148‑1 (MQ=255) cAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCCCCAAACAAACACTGCCGTGGATTCCACCCGCTTTTCCCGTTTTAGCCGGCGTGCCCCCAACCACAAA‑GGGC‑CCCGGGCCAGCGCAagccaaag > 6:145069/1‑145 (MQ=255) gAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCAc > 1:83429/1‑149 (MQ=255) gAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCGTTGCCGGTGTTAGCGGGCGGTCCCGCTCCCACAAG‑GGGC‑GCGGGGCCAGCGCTAGCCAGCCACCAGccc > 7:271065/1‑147 (MQ=38) gCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTcc < 1:162447/149‑1 (MQ=255) ctactgccccccTGCGCGCGCGCGCGAGCCCGCGAAGCAGCCCCTGCCGCGGAGGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAgg > 8:271065‑M1/13‑149 (MQ=255) ccTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAgg < 1:277470/149‑1 (MQ=255) cTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAGTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGggcggc < 3:98213/149‑1 (MQ=255) cTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGggcggc < 4:222102/149‑1 (MQ=255) TGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGcc > 8:45528‑M1/1‑149 (MQ=255) gggagcgggcacgcccgcgaacaccggcaaagccggtggcatccaccgcagtggatgcttcgcgggctcgcccgctcccacaAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑tc > 6:144480‑M2/83‑149 (MQ=255) agcgggcacgcccgcgaacaccggcaaagccggtggcatccaccgcaggtggatgcttcgcgggctcgcccgctcccacaAG‑GGGC‑GCGGGGCCTGCGCTAGCCCGCCCCCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑tctc > 1:273122‑M2/81‑149 (MQ=255) GAGCGGGCGTGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑tctc > 6:313343‑M1/1‑149 (MQ=255) GCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCa > 2:83429‑M1/1‑149 (MQ=255) GGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAg < 3:91583‑M1/148‑1 (MQ=255) gcacgcccgcgaacaccggcaaagccggtggcatccaccgcagtggatgcttcgcgggctcgcccgctcccacaAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCAt > 5:354782‑M2/75‑149 (MQ=255) cccGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCCCGACCACAAG‑GGGC‑GCGGGGCCTGCGCGAGCCCCCCCCCACCACGCGAATGGCTTACAGGCGCAGGGCGGCCT‑TATCCCGCATTGCCa > 6:255497/1‑149 (MQ=37) ccGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAg < 3:48971/149‑1 (MQ=255) cgcgaacaccggcaaagccggtggcatccaccgcagtggatgcttcgcgggctcgcccgctcccacaGGAAGGCATTAGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGc > 2:116407‑M2/68‑147 (MQ=255) cgcgAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAgg > 1:208824/1‑149 (MQ=255) gcgAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAG‑GGGC‑GCGGGGCCTGCGCTagccag < 7:301540/92‑1 (MQ=255) gcgAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAG‑GGGC‑GCGGGGCCTGCGCTagccag > 8:301540/1‑92 (MQ=255) gcgAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGc > 2:288748/1‑149 (MQ=255) cgaacaccggcaaagccggtggcatccaccgcagtggatgcttcgcgggcgtgcccgctcccacaAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCt‑t > 4:26394‑M2/66‑131 (MQ=255) gccaacgccggtggcatccaccgccgtggttgcttcgcgggctcgcccgctcccacaAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTcgc < 6:354782‑M2/92‑1 (MQ=255) ccACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGcc > 3:230275/1‑141 (MQ=255) ccACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGcc < 4:230275/141‑1 (MQ=255) ccACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTcgc > 1:374709/1‑149 (MQ=255) ccACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTcgc > 7:130506/1‑149 (MQ=255) cACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTcgc < 2:99507/148‑1 (MQ=255) ggTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTCGCGCCGCtt < 4:91583/149‑1 (MQ=255) gTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTCACGCCGCTTg > 6:338555/1‑149 (MQ=255) cgaacACCGGCAAAGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTgcg > 5:339605/5‑147 (MQ=255) tGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGCATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGGCAGGCCAGCTTCGCGCCGCTTGCGCAg > 7:63895/1‑149 (MQ=255) catccaccgcagtggatgcttcgcgggctcgcccgctcccacaAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAgg < 2:273122‑M2/106‑1 (MQ=255) ccACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAgg < 8:130506/148‑1 (MQ=255) cACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTCGcgccgc > 3:359640/1‑138 (MQ=255) cACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTCGcgccgc < 4:359640/138‑1 (MQ=255) cACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGc > 2:260637/1‑149 (MQ=255) cACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGc > 7:201662/1‑149 (MQ=255) cACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGc < 3:194022/149‑1 (MQ=255) aCCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCCCAAG‑GGGC‑GCGGGGCCGGCGCTAGCCAGCCACCCGCACGCGAATGGCTTCCAGGCGCCGGGCGGCCG‑TCTCCCGCATTTCCAGGCCCTCTTCGCGCCGCTTGCGCAGGGCg > 8:125378/1‑149 (MQ=255) cGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTc > 4:240884/1‑149 (MQ=255) tggatgcttcgcgggctcgcccgctcccacaAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTCGATTTCg < 5:144480‑M2/118‑1 (MQ=255) gCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTCGATTTc < 3:235591/148‑1 (MQ=255) gCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTCGATTTc < 5:126417/148‑1 (MQ=255) cGGTGTTCGCGGGCGTGCCCGCTCCCCCAAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCCCCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCG‑TCTCCAGCATTGCCAGGCCATCTTCGCGCCGCATGCGCAGGGCGTCGATTTAGCt > 6:239682/1‑149 (MQ=255) cGGTGTTCGCGGGCGTGCCCGCTCCCACAAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTCACTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTCGATTTCGc < 1:288748/149‑1 (MQ=255) gtgtTCGCGGGCGTGCCCGCAACCACAAG‑GGGC‑GCGGGGCCAGCGCTAGCCAGCCACCAGCACGCGAATGGCATCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTCGCGCCCCATGCGCAGGGCGTCGAATTCGCtt > 8:124221/1‑147 (MQ=255) ttCGCGGGCGTGCCCGCTCCCACAAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTCGATTTAGCTGTCAc > 1:380725/1‑149 (MQ=255) gggCGTGCCCGCTCCCACAAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTCGATTTCGCTGTCACGcaca > 5:4875/1‑149 (MQ=255) gCGTGCCCGCTCCCACAAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTCGATTTCGCTGTCACGCACACt > 8:216594/1‑149 (MQ=255) tGCCCGCTCCCACAAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTCGATTTCGCTGTCACGCACACTTgg < 2:374709/149‑1 (MQ=255) cccgctcccacaAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTCGATTTCGCTGTCACGCACACTTggg < 1:43299‑M2/136‑1 (MQ=255) cccgctcccacaAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTCGATTTCGCTGTCACGCACACTTGGGt > 6:307646‑M2/13‑149 (MQ=255) ccgctcccacaAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTCGATTTCGCTGTCACGCACACTTGGGtt < 1:260637‑M2/138‑1 (MQ=255) ccgctcccacaAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTCGATTTCGCTGTCACGCACACTTGGGtt > 7:340858‑M2/12‑149 (MQ=255) cgctcccacaAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTCGATTTCGCTGTCACGCACACTTGGGtt > 6:353480‑M2/11‑148 (MQ=255) gctcccacaAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTCGATTTCGCTGTCACGCACACTTGGGTTGa < 5:353480‑M2/140‑1 (MQ=255) tcccacaAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑tctc > 5:81078‑M2/8‑76 (MQ=255) tcccacaAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑tctc < 6:81078‑M2/69‑1 (MQ=255) tcccacaAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTCGATTTCGCTGTCACGCACACTTGGGTTGAcc > 2:271504‑M2/8‑149 (MQ=255) ccacaAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTCGATTTCGCTGTCACGCACACTTggg < 4:256241‑M2/136‑1 (MQ=255) ccacaAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTCGATTTCGCTGTCACGCACACTTggg > 3:256241‑M2/6‑141 (MQ=255) ccacaAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTCGATTTCGCTGTCACGCACACTTGGGTTGAcc < 7:316420‑M2/142‑1 (MQ=255) ccacaAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTCGATTTCGCTGTCACGCACACTTGGGTTGACCGc > 8:195458‑M2/6‑149 (MQ=255) ccacaAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTCGATTTCGCTGTCACGCACACTTGGGTTGACCGc > 2:345424‑M2/6‑149 (MQ=255) ccacaAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGAGCAGGGCGGCCT‑TCTACAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTCGATTTCGCGGTCACGCACACTGGGGTTGACCGc > 1:303950‑M2/6‑149 (MQ=255) cacaAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTCGATTTCGCTGTCACGCACACTTGGGTTGACCGCt > 4:263030‑M2/5‑149 (MQ=255) aAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTCGATTTCGCTGTCACGCACACTTGGGTTGACCGCTTg > 2:42347‑M2/2‑148 (MQ=255) aAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTCGATTTCGCTGTCACGCACACTTGGGTTGACCGCTTGc < 3:240884‑M2/148‑1 (MQ=255) | CTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAG‑GGGC‑GCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCT‑TCTCCAGCATTGCCAGGCCATCTTCGCGCCGCTTGCGCAGGGCGTCGATTTCGCTGTCACGCACACTTGGGTTGACCGCTTGC > NC_002947/1311646‑1311939 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |