New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1451149	62 (1.030)	6 (0.110)	6/250	NT	8.7%	coding (333/906 nt)	PP_1270	LysR family transcriptional regulator
	?	NC_002947	= 1451175	67 (1.180)					coding (359/906 nt)	PP_1270	LysR family transcriptional regulator

CATGGCCTGGTGGAGCAGGCCGGGCAGGTGTTCCGCAGCCGTGACGATGTCGACCTGGTGAACCTGGACCGTGCCTTCAACATCCGCACCAATGATTTGTTCATTGCCCTTTACGGCGCCCAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAGGGCAGTGGTGACGATGATGCAGTGCTGCGCAACGGGCATATCGACCTGATCATCAGCTCGGCCATTGAACTGGGCCCGGAAATCAAGGTGCAGAGCCTGTTCAATACTTACT  >  NC_002947/1451030‑1451321                                                                                                                                                  |                                                                                                                                                      cATGGCCTGGTTGAGCAGGCCGGGCAGGTGTTCCGCAGCCGTGACGATGTCGACCTGGTGAACCTGGACCGTGCCTTCAACATCCGCACCAATGATTTGTTCATTGCCCTTTACGGCGCCCAGCTGCTGCGCATGATGCTGGCCCAgg                                                                                                                                                     >  5:155258‑M2/1‑146 (MQ=255)              aGCAGGCCGGGCAGGTGTTCCGCAGCCGTGACGATGTCGACCTGGTGAACCTGGACCGTGCCTTCAACATCCGCACCAATGATTTGTTCATTGCCCTTTACGGCGCCCAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGgtg                                                                                                                                     <  5:252696/149‑1 (MQ=255)                   gCCGGGCAGGTGTTCCGCAGCCGTGACGATGTCGACCTGGTGAACCTGGACCGTGCCTTCAACATCCGCACCAATGATTTGTTCATTGCCCTTTACGGCGCCCAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCg                                                                                                                                <  7:268781/149‑1 (MQ=255)                        gCAGGTGTTCCGCAGCCGTGACGATGTCGACCTTGTGAACCTGGACCGTGCCTTCAACATCCGCACCAATGATTTGTTCATTGCCCTTTACGGCGCCCAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACTGTGTTGCGGTTTg                                                                                                                           >  4:228446/1‑149 (MQ=255)                               ttCCGCAGCCGTGACGATGTCGACCTGGTGAACCTGGACCGTGCCTTCAACATCCGCACCAATGATTTGTTCATTGCCCTTTACGGCGCCCAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGt                                                                                                                              <  4:103032/139‑1 (MQ=255)                               ttCCGCAGCCGTGACGATGTCGACCTGGTGAACCTGGACCGTGCCTTCAACATCCGCACCAATGATTTGTTCATTGCCCTTTACGGCGCCCAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGt                                                                                                                              >  3:103032/1‑139 (MQ=255)                               ttCCGCAGCCGTGACGATGTCGACCTGGTGAACCTGGACCGTGCCTTCAACATCCGCACCAATGATTTGTTCATTGCCCTTTACGGCGCCCAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGa                                                                                                                   <  3:26880/149‑1 (MQ=255)                                        cGTGACGATGTCGACCTGGTGAACCTGGACCGTGCCTTCAACATCCGCACCAATGATTTGTTCATTGCCCTTTACGGCGCCCAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAGGGCAgtgg                                                                                                          >  2:236831/1‑149 (MQ=255)                                              gATGTCGACCTGGTGAACCTGGACCGTGCCTTCAACATCCGCACCAATGATTTGTTCATTGCCCTTTACGGCGCCCAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAGGGCAGTGGTGACga                                                                                                    >  2:166029/1‑149 (MQ=255)                                                  tCGACCTGGTGAACCTGGACCGTGCCTTCAACATCCGCACCAATGATTTGTTCATTGCCCTTTACGGCGCCCAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAGGGCAGTGGTGACgatga                                                                                                 <  4:343436/148‑1 (MQ=255)                                                   cGACCTGGGGAACCTGGACGTTGCCTTCTAGATCCGCACCAATGTGTTGTTCATTGCCCTTTACGGCGAACAGCTGCTGCGCTTGAGTGTGGCCGATGCGCC‑‑TCGTACTGTGTTGCCGTTTGT‑CCCGGAGGGCAGTGGTGAAgatgat                                                                                                <  2:236439/148‑1 (MQ=255)                                                    gACCTTGTGAACCTGGACCGTGCCTTCAACATCCGCACCAATGATTTGTTCATTGCCCTTTACGGCGCCCAGCTGCTGCGCATGATGCTGGCCCTGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAGGGCAGTGGTGACTatgatg                                                                                               <  3:228446/148‑1 (MQ=255)                                                     aCCTGGTGAACCTGGACCGTGCCTTCAACATCCGCACCAATGATTTGTTCATTGCCCTTTACGGCGCCCAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCTGAGGGCAGTGGTGACGATGATGCa                                                                                             <  5:72909/149‑1 (MQ=255)                                                     aCCTGGTGAACCTGGACCGTGCCTTCAACATCCGCACCAATGATTTGTTCATTGCCCTTTACGGCGCCCAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAGGGCAGTGGTGACGATGATGCa                                                                                             <  6:364200/149‑1 (MQ=255)                                                      ccTGGTGAACCTGGACCGTGCCTTCAACATCCGCACCAATGATTTGTTCATTGCCCTTTACGGCGCCCAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAGGGCAGTGGTGACGATGATGCAg                                                                                            >  7:342201/1‑149 (MQ=255)                                                          gTGAACCTGGACCGTGCCTTCAACATCCGCACCAATGATTTGTTCATTGCCCTTTACGGCGCCCAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAGGGCAGTGGTGACGATGATGCAGtgct                                                                                        <  4:192427/149‑1 (MQ=255)                                                             aaCCTGGACCGTGCCTTCAACATCCGCACCAATGATTTGTTCATTGCCCTTTACGGCGCCCAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAGGGCAGTGGTGACGATGATGCAGTGCTgcg                                                                                     >  5:341619/1‑149 (MQ=255)                                                                cTGGACCGTGCCTTCAACATCCGCACCAATGATTTGTTCATTGCCCTTTACGGCGCCCAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAgg                                                                                                                 <  6:61815/118‑1 (MQ=255)                                                                cTGGACCGTGCCTTCAACATCCGCACCAATGATTTGTTCATTGCCCTTTACGGCGCCCAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAgg                                                                                                                 >  5:61815/1‑118 (MQ=255)                                                                cTGGACCGTGCCTTCAACATCCGCACCAATGATTTGTTCATTGCCCTTTACGGCGCCCAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAGGGCAGTGGTGACGATGATGCAGTGCTGCGCaa                                                                                  >  7:193060/1‑149 (MQ=255)                                                                     ccGAGCCTTCAACATCCGCACCAATGATTTGTTCATTGCCCTTTACGGCGCCCAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAGGGCAGTGGTGACGATGATGCAGTGCTGCGCAACGGGc                                                                             <  6:312351/149‑1 (MQ=255)                                                                      cGTGCCTTCAACATCCGCACCAATGATTTGTTCATTGCCCTTTACGGCGCCCAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAGGGCAGTGGTGACGATGATGCAGTGCTGCGCAACGGGCa                                                                            <  1:166029/149‑1 (MQ=255)                                                                          ccTTCAACATCCGCACCAATGATTTGTTCATTGCCCTTTACGGCGCCCAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAGGGCAGTGGTGACGATGATGCAGTGCTGCGCAACGGGCATATc                                                                        <  6:181629/149‑1 (MQ=255)                                                                            ttCTACATCCGCACCTATGATTTGTTCATTGCGCTTTACGGCGCCCAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTGTGT‑CCCGGAGGGCAGTGGTGACGATGATGCAGTGCTGCGCAACGGGCATATCgc                                                                      >  5:5797/1‑148 (MQ=255)                                                                            ttCAACATCCGCACCAATGATTTGTTCATTGCCCTTTACGGCGCCCAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAGGGGAGTGGTGACGATGATGCAGTGCTGCGCAACGGGCATATCGa                                                                      >  3:145597/1‑149 (MQ=255)                                                                            ttCAACATCCGCACCAATGATTTGTTCATTGCCCTTTACGGCGCCCAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAGGGCAGTGGTGACgatgat                                                                                                <  7:193586/123‑1 (MQ=255)                                                                            ttCAACATCCGCACCAATGATTTGTTCATTGCCCTTTACGGCGCCCAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAGGGCAGTGGTGACgatgat                                                                                                >  8:193586/1‑123 (MQ=255)                                                                             tCAACATCCGCACCAATGATTTGTTCATTGCCCTTTACGGCGCCCAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAGGGCAGTGGTGACGATGATGCAGTGCTGCGCAACGGGCata                                                                          >  4:44859/1‑144 (MQ=255)                                                                             tCAACATCCGCACCAATGATTTGTTCATTGCCCTTTACGGCGCCCAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAGGGCAGTGGTGACGATGATGCAGTGCTGCGCAACGGGCata                                                                          <  3:44859/144‑1 (MQ=255)                                                                                aCATCCGCACCAATGATTTGTTCATTGCCCTTTACGGCGCCCAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAGGGCAGTGGTGACGATGATGCAGTGCTGCGCAACGGGCATATCGACCt                                                                   >  6:377464/1‑148 (MQ=255)                                                                                 cATCCGCACCAATGATTTGTTCATTGCCCTTTACGGCGCCCAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAGGGCAGTGGTGACGATGATGCAGTGCTGCGCAACGGGCATATCGACCTGa                                                                 <  5:333056/149‑1 (MQ=255)                                                                                   tCCGCACCAATGATTTGTTCATTGCCCTTTACGGCGCCCAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAGGGCAGTGGTGACGATGATGCAGTGCTGCGCAACGGGCATATCGACCTGatc                                                               <  2:77933/149‑1 (MQ=255)                                                                                   tCCGCACCAATGATTAGTTCATTGCCCTTTACGGCGCCCAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAGGGCAGTGGTGACGATGATGCAGTGCTGCGCAACGGGCATATCGACCTGat                                                                >  5:315217/1‑148 (MQ=255)                                                                                     cGCACCAATGATTTGTTCATTGCCCTTTACGGCGCCCAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAGGGCAGTGGTGACGATGATGCAGTGCTGCGCAACGGGCATATCGACCTGatca                                                              <  1:236831/148‑1 (MQ=255)                                                                                       cACCAATGATTTGTTCATTGCCCTTTACGGCGCCCAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAGGGCAGTGGTGACGATGATGCAGTGCTGCGCAACGGGCATATCGACCTGatcat                                                             >  8:292761/1‑147 (MQ=255)                                                                                       cACCAATGATTTGTTCATTGCCCTTTACGGCGCCCAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAGGGCAGTGGTGACGATGATGCAGTGCTGCGCAACGGGCATATCGACCTGAtcatca                                                           <  7:292761/149‑1 (MQ=255)                                                                                          cAATGATTTGTTCATTGCCCTTTACGGCGCCCAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAGGGCAGTGGTGACGATGATGCAGTGCTGCGCAACGGGCATATCg                                                                       >  7:85967/1‑134 (MQ=255)                                                                                          cAATGATTTGTTCATTGCCCTTTACGGCGCCCAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAGGGCAGTGGTGACGATGATGCAGTGCTGCGCAACGGGCATATCg                                                                       <  8:85967/134‑1 (MQ=255)                                                                                          cAATGATTTGTTCATTGCCCTTTACGGCGCCCAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAGGGCAGTGGTGACGATGATGCAGTGCTGCGCAACGGGCATATCGACCTGATCATCAGCt                                                        >  8:214309/1‑149 (MQ=255)                                                                                           aaTGATTTGTTCATTGCCCTTTACGGCGCCCAGCTGATGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTCCGGTTTGT‑CCCGGAGGGCAGTGGTGACGATGAAGCAGTCATGCGCAACGGGCATATCGACCTGATCATCAGCTc                                                       >  2:106739/1‑149 (MQ=255)                                                                                             tGATTTGTTCATTGCCCTTTACGGCGCCCAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAGGGCAGTGGTGACGATGATGCAGTGCTGCGCAACGGGCATATCGACCTGATCATCAGCTCgg                                                     >  5:255969/1‑149 (MQ=255)                                                                                              gATTTGTTCATTGCCCTTTACGGCGCCCAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAGGGCAGTGGTGACGATGATGCAGTGCTGCGCAACGGGCATATCGACCTGATCATCAGCTCGGc                                                    >  4:231279/1‑149 (MQ=255)                                                                                               aTTTGTTCATTGCCCTTTACGGCGCCCAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAGGGCAGTGGTGACGATGATGCAGTGCTGCGCAACGGGCATATCGACCTGATCATCAGCTCGGc                                                    >  4:159981/1‑148 (MQ=255)                                                                                                tttGTTCATTGCCCTTTACGGCGCCCAGCTGCTGCGCATGATGCTGGCCCAGGCGCCGAGGGTACGGTGTTGCGGTTTGT‑CCCGGAGGGCAGTGGTGACGATGATGCAGTGCTGCGCAACGGGCATATCGACCTGATCATCAGCTCGGc                                                    >  1:108424/1‑149 (MQ=255)                                                                                                    ttCATTGCCCTTTACGGCGCCCAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAGGGCAGTGGTGACGATGATGCAGTGCTGCGCAACGGGCATATCGACCTGATCATCAGCTCGGCCATTg                                               >  4:39900/1‑148 (MQ=255)                                                                                                    ttCATTGCCCTTTACGGCGCCCAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAGGGCAGTGGTGACGATGATGCAGTGCTGCGCAACGGGCATATCGACCTGATCATCAGCTCGGCCATTg                                               >  5:242403/1‑148 (MQ=255)                                                                                                    ttCATTGCCCTTTACGGCGCCCAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAGGGCAGTGGTGACGATGATGCAGTGCTGCGCAACGGGCATATCGACCTGATCATCAGCTCGGCCATTg                                               <  8:342201/148‑1 (MQ=255)                                                                                                       aTTGCCCTTTACGGCGCCCAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAGGGCAGTGGTGACGATGATGCAGTGCTGCGCAACGGGCATATCGACCTGATCATCAGCTCGGCCATTGAACt                                           >  4:152378/1‑149 (MQ=255)                                                                                                       aTTGCCCTTTACGGCGCCCAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAGGGCAGTGGTGACGATGATGCAGTGCTGCGCAACGGGCATATCGACCTGATCATCAGCTCGGCCATTGAACt                                           <  3:152378/149‑1 (MQ=255)                                                                                                           cccTTTACGGCGCCCAGCTGCTGCGCATGATGCTGGCCCAggcgccgtaaagggcaatgaacaaatcattggtgcggatgttgaaggcacggtccaggttcaccaggtcgacatcgtcacggctgcggaacacctgcccggcctgctc                                           <  7:8321‑M2/148‑109 (MQ=255)                                                                                                            ccTTTACGGCGCCCAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAGGGCAGTGGTGACGATGATGCAGTGCTGCGCAACGGGCATATCGACCTGATCATCAGCTCGGCCATTGAACTGGGcc                                      >  8:138239/1‑149 (MQ=255)                                                                                                             cTTTACGGCGCCCAGCTGCTGCGCATGATGCTGGCCCAggcgccgtaaagggcaatgaacaaatcattggtgcggatgttgaaggcacggtccaggttcaccaggtcgacatcgtcacggctgcggaacacctgcccggcctgctccac                                        <  1:318887‑M2/149‑112 (MQ=255)                                                                                                             cTTTACGGCGCCCAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAGGGCAGTGGTGACGATGATGCAGTGCTGCGCAACGGGCATATCGACCTGATCATCAGCTCGGCCATTGACCTGGGccc                                     >  3:253721/1‑149 (MQ=255)                                                                                                                  cGGCGCCCAGCTGCTGCGCATGATGCTGGCCCAggcgccgtaaagggcaatgaacaaatcattggtgcggatgttgaaggcacggtccaggttcaccaggtcgacatcgtcacggctgcggaacacctgcccggcctgctccaccagg                                    <  3:206481‑M2/148‑116 (MQ=255)                                                                                                                  cGGCGCCCAGCTGCTGCGCATGATGCTGGCCCAggcgccgtaaagggcaatgaacaaatcattggtgcggatgttgaaggcacggtccaggttcaccaggtcgacatcgtcacggctgcggaacacctgcccggcctgctccaccagg                                    >  4:206481‑M2/1‑33 (MQ=255)                                                                                                                   ggCGCCCAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGTCCCCGGAGGGCAGTGGTGACGATGATGCAGtg                                                                                          <  1:231562/91‑1 (MQ=255)                                                                                                                   ggCGCCCAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAGGGCAGTGGTGACGATGCTGCAGTGCTGCGCAACGGGCATATCGACCTGATCATCAGCTCGGCCATTGAACTGGGCCCGGaaa                                >  5:312200/1‑148 (MQ=255)                                                                                                                   ggCGCCCAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAGGGCAGTGGTGACGATGATGCAGtg                                                                                          >  2:231562/1‑90 (MQ=255)                                                                                                                   ggCGCCCAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAGGGCAGTGGTGACGATGATGCAGTGCTGCGCAACGGGCATATCGACCTGATCATCAGCTCGGCCATTGAACTGGGCCCGGaaa                                >  4:145392/1‑148 (MQ=255)                                                                                                                    gcgcCCAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAGGGCAGTGGTGACGATGATGCAGTGCTGCGCAACGGGCATATCGACCTGATCATCAGCTCGGCCATTGAACTGGGCCCGGAAATc                              <  3:145392/149‑1 (MQ=255)                                                                                                                       cccAGCTGCTGCGCATGATGCTGGCCCAggcgccgtaaagggcaatgaacaaatcattggtgcggatgttgaaggcacggtccaggttcaccaggtcgacatcgtcacggctgcggaacacctgcccggcctgctccaccaggccatgc                              >  2:318887‑M2/1‑28 (MQ=255)                                                                                                                       cccAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAGGGCAGTGGTGACGATGATGCAGTGCTGCGCAACGTGCATATCGACCTGATCATCAGCTCGGCCATTGAACTGTGCCCGGAAATCAAg                           <  2:108424/149‑1 (MQ=255)                                                                                                                       cccAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAGGGCAGTGGTGACGATGATGCAGTGCTGCGCAACGGGCATATCGACCTGATCATCAGCTCGGCCATTGAACTGGGCCCGGAAATCAAg                           <  3:39900/149‑1 (MQ=255)                                                                                                                        ccAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAGGGCAGTGGTGACGATGATGCAGTGCTGCGCAACGGGCATATCGACCTGATCATCAGCTCGGCCATTGAACTGGGCCCGGAAATCAAgg                          <  6:315217/149‑1 (MQ=255)                                                                                                                          aGCTGCTGCGCATGATGCTGGCCCAggcgccgtaaagggcaatgaacaaatcattggtgcggatgttgaaggcacggtccaggttcaccaggtcgacatcgtcacggctgcggaacacctgcccggcctgctccaccaggccatgcacc                           >  8:8321‑M2/1‑25 (MQ=255)                                                                                                                          aGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAGGGCAGTGGTGACGATGATGCAGTGCTGCGCAACGGGCATATCGACCTGATCATCAGCTCGGCCATTGAACTGGGCCCGGAAATCAAGGTg                        <  4:93649/149‑1 (MQ=255)                                                                                                                           gctgctGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAGGGCAGTGGTGACGATGATGCAGTGCTGCGCAACGGGCATATCGACCTGATCATCAGCTCGGCCATTGAACTGGGCCCGGAAATCAAGGTGc                       <  6:242403/149‑1 (MQ=255)                                                                                                                              gctgcGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAGGGCAGTGGTGACGATGATGCAGTGCTGCGCAACGGGCATATCGACCTGATCATCAGCTCGGCCATTGAACTGGGCCCGGAAATCAAGGTGCa                      >  3:51821/1‑147 (MQ=255)                                                                                                                                  cgcATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAGGGCAGTGGTGACGATGATGCAGTGCTGCGCAACGGGCATATCGACCTGATCATCAGCTCGGCCATTGAACTGGGCCCGGAAATCAAGGTGCAGAGCCt                >  3:347187/1‑149 (MQ=255)                                                                                                                                     atgatgCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAGGGCAGTGGTGACGATGATGCAGTGCTGCGCAACGGGCATATCGACCTGATCATCAGCTCGGCCATTGAACTGGGCCCGGAAATCAAGGTGCAGAGCCTGtt             <  7:214309/149‑1 (MQ=255)                                                                                                                                      tgatgCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAGGGCAGTGGTGACGATGATGCAGTGCTGCGCAACGGGCATATCGACCTGATCATCAGCTCGGCCATTGAACTGGGCCCGGAAATCAAGGTGCAGAGCCTGtt             >  1:87277/1‑148 (MQ=255)                                                                                                                                         tgCTGGCCCAGGCGCC‑‑GCGTACGTTGTTGCGGTTTGT‑CCCGGAGGGCAGTGGTGACGATGATGCAGTGCTGCGCAACGGGCATATCGACCTGATCTTCAGCTCGGCCATTGAACTGGGCCCGGAAATCAAGGTGCAGAGCCTGTTCaa          <  1:106739/148‑1 (MQ=255)                                                                                                                                          gCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAGGGCAGTGGTGACGATGATGCAGTGCTGCGCAACGGGCATATCGACCTGATCATCAGCTCGGCCATTGAACTGGGCCCGGAAATCAAGGTGCAGAGCCTGTTCAAt         >  7:121296/1‑148 (MQ=255)                                                                                                                                            tGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAGGGCAGTGGTGACGATGATGCAGTGCTGCGCAACGGGCATATCGACCTGATCATCAGCTCGGCCATTGAACTGGGCCCGGAAATCAAGGTGCAGAGCCTGTTCAAtact      >  6:360892/1‑149 (MQ=255)                                                                                                                                                ccAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAGGGCAGTGGTGACGATGATGCAGTGCTGCGCAACGGGCATATCGACCTGATCATCAGCTCGGCCATTGAACTGGGCCCGGAAATCAAGGTGCAGAGCCTGTTCAAtacttact  <  5:377464/149‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                      CATGGCCTGGTGGAGCAGGCCGGGCAGGTGTTCCGCAGCCGTGACGATGTCGACCTGGTGAACCTGGACCGTGCCTTCAACATCCGCACCAATGATTTGTTCATTGCCCTTTACGGCGCCCAGCTGCTGCGCATGATGCTGGCCCAGGCGCC‑‑GCGTACGGTGTTGCGGTTTGT‑CCCGGAGGGCAGTGGTGACGATGATGCAGTGCTGCGCAACGGGCATATCGACCTGATCATCAGCTCGGCCATTGAACTGGGCCCGGAAATCAAGGTGCAGAGCCTGTTCAATACTTACT  >  NC_002947/1451030‑1451321

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.