New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 255564666 (1.100)4 (0.070) 4/256 NT 5.4% coding (1627/1881 nt) PP_2240 ABC transporter permease/ATP‑binding protein
?NC_002947 = 2555690 76 (1.300)coding (1671/1881 nt) PP_2240 ABC transporter permease/ATP‑binding protein

AGGATGAACTGCTCATGCAGCAGGCGTTGCGCCAGGTCAACCTGGCCCATCTCGCCGAGCGTCTGGACGTCAGCTGTGACTGGTCACACATCCTCTCGGTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCTCGGCAATGGATGAAGGGCTCGAGCATGCCCTGTATGCGTTGTTGCGTTCGGAGATGCCGAGTGCATTGCTGGTCAGTGTCGGCCACCGCAGCACACTGGCAGCGTTCCACACCCAC  >  NC_002947/2555545‑2555837
                                                                                                                                                 |                                                                                                                                                    
aGGATGAACTGCTCATGCAGCAGGCGTTGCGCCAGGTCAACCTGGCCCATCTCGCCGAGCGTCTGGACGTCAGCTGTGACTGGTCACACATCCTCTCGGTGGCCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGcca                                                                                                                                                   >  1:83509‑M2/1‑146 (MQ=255)
     gAACTGCTCATGCAGCAGGCGTTGCGCCAGGTCAACCTGGCCCATCTCGCCGAGCGTCTGGACGTCAGCTGTGACTGGTCACACATCCTCTCGGTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAggt                                                                                                                                             >  5:319502/1‑149 (MQ=255)
      aaCTGCTCATGCAGCAGGCGTTGCGCCAGGTCAACCTGGCCCATCTCGCCGAGCGTCTGGACGTCAGCTGTGACTGGTCACACATCCTCTCGGTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAggt                                                                                                                                             <  7:79958/148‑1 (MQ=255)
       aCTGCTCATGCAGCAGGCGTTGCGCCAGGTCAACCTGGCCCATCTCGCCGAGCGTCTGGACGTCAGCTGTGACTGGTCACACATCCTCTCGGTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAggtgg                                                                                                                                           >  1:140812/1‑149 (MQ=255)
       aCTGCTCATGCAGCAGGCGTTGCGCCAGGTCAACCTGGCCCATCTCGCCGAGCGTCTGGACGTCAGCTGTGACTGGTCACACATCCTCTCGGTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAggtgg                                                                                                                                           >  8:17482/1‑149 (MQ=255)
        cTGCTCATGCAGCAGGCGTTGCGCCAGGTCAACCTGGCCCATCTCGCCGAGCGTCTGGACGTCAGCTGTGACTGGTCACACATCCTCTCGGTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGGTGTTCAACCGGCCACAggtggt                                                                                                                                          >  8:228913/1‑149 (MQ=255)
        cTGCTCATGCAGCAGGCGTTGCGCCAGGTCAACCTGGCCCATCTCGCCGAGCGTCTGGACGTCAGCTGTGACTGGTCACACATCCTCTCGGTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAggtggt                                                                                                                                          >  7:3014/1‑149 (MQ=255)
           cTCATGCAGCAGGCGTTGCGCCAGGTCAACCTGGCCCATCTCGCCGAGCGTCTGGACGTCAGCTGTGACTGGTCACACATCCTCTCGGTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGtt                                                                                                                                       >  5:157049/1‑149 (MQ=255)
            tCATGCAGCAGGCGTTGCGCCAGGTCAACCTGGCCCATCTCGCCGAGCGTCTGGACGTCAGCTGTGACTGGTCACACATCCTCTCGGTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTc                                                                                                                                      >  1:266348/1‑149 (MQ=255)
              aTGCAGCAGGCGTTGCGCCAGGTCAACCTGGCCCATCTCGCCGAGCGTCTGGACGTCAGCTGTGACTGGTCACACATCCTCTCGGTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACGGGCCACAGGTGGTGTTCCt                                                                                                                                    >  2:266885/1‑149 (MQ=255)
               tGCAGCAGGCGTTGCGCCAGGTCAACCTGGCCCATCTCGCCGAGCGTCTGGACGTCAGCTGTGACTGGTCACACATCCTCTCGGTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTc                                                                                                                                   <  7:255686/149‑1 (MQ=255)
                  agcagGCGTTGCGCCAGGTCAACCTGGCCCATCTCGCCGAGCGTCTGGACGTCAGCTGTGACTGGTCACACATCCTCTCGGTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTcgac                                                                                                                                <  5:81808/149‑1 (MQ=255)
                  agcagGCGTTGCGCCAGGTCAACCTGGCCCATCTCGCCGAGCGTCTGGACGTCAGCTGTGACTGGTCACACATCCTCTCGGTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTcgac                                                                                                                                <  8:43616/149‑1 (MQ=255)
                      ggCGTTGCGCCAGGTCAACCTGGCCCATCTCGCCGAGCGTCTGGACGTCAGCTGTGACTGGTCACACATCCTCTCGGTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGt                                                                                                                            <  2:140812/149‑1 (MQ=255)
                            gggcCAGGTTGACCTGGCCCATCTCGCCGAGCGTCTGGACGTCAGCTGTGACTGGTCACACATCCTCTCGGTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCt                                                                                                                      >  6:176825/3‑149 (MQ=255)
                            gcgcCAGGTCAACCTGGCCCATCTCGCCGAGCGTCTGGACGTCAGCTGTGACTGGTCACACATCCTCTCGGTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCt                                                                                                                      >  6:53902/1‑149 (MQ=255)
                              gcCAGGTCAACCTGGCCCATCTCGCCGAGCGTCTGGACGTCAGCTGTGACTGGTCACACATCCTCTCGGTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCTCg                                                                                                                    >  5:83783/1‑149 (MQ=255)
                              gcCAGGTCAACCTGGCCCATCTCGCCGAGCGTCTGGACGTCAGCTGTGACTGGTCACACATCCTCTCGGTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCTCg                                                                                                                    <  7:17482/149‑1 (MQ=255)
                              gcCAGGTCAACCTGGCCCATCTCGCCGAGCGTCTGGACGTCAGCTGTGACTGGTCACACATCCTCTCGGTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTACTCGACGAGTCCACCTCg                                                                                                                    >  4:267452/1‑149 (MQ=255)
                               ccAGGTCAACCTGGCCCATCTCGCCGAGCGTCTGGACGTCAGCTGTGACTGGTCACACATCCTCTCGGTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCTCgg                                                                                                                   <  2:63567/149‑1 (MQ=255)
                                cAGGTCAACCTGGCCCATCTCGCCGAGCGTCTGGACGTCAGCTGTGACTGGTCACACATCCTCTCGGTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTc                                                                                                                           <  7:343910/140‑1 (MQ=255)
                                cAGGTCAACCTGGCCCATCTCGCCGAGCGTCTGGACGTCAGCTGTGACTGGTCACACATCCTCTCGGTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTc                                                                                                                           >  8:343910/1‑140 (MQ=255)
                                    ttgaCCTGGCCCATCTCGCCGAGCGTCTGGACGTCAGCTGTGACTGGTCACACATCCTCTCGGTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCTCGGCAATg                                                                                                              <  5:176825/146‑1 (MQ=255)
                                    tCAACCTGGCCCATCTCGCCGAGCGTCTGGACGTCAGCTGTGACTGGTCACACATCCTCTCGGTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCTCGGCAATg                                                                                                              <  8:3014/149‑1 (MQ=255)
                                      aaCGTGGCCCATCTCGCCTAGCGGCTGGACGTCAGCTGTGACTGGTCACACATCCTCTCGGTGGGCGAGGAGCAGCGGCTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACATGTGGTGTTCCTCGAGGAGTCCTCCTCTGCAATGGa                                                                                                            <  4:360452/149‑1 (MQ=255)
                                      aaCCTGGCCCATCTCGCCGAGCGTCTGGACGTCAGCTGTGACTGGTCACACATCCTCTCGGTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCTCGGCAATGGa                                                                                                            <  2:266348/149‑1 (MQ=255)
                                       aCCTGGCCCATCTCGCCGAGCGTCTGGACGTCAGCTGTGACTGGTCACACATCCTCTCGGTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCTCGGCAATGGAt                                                                                                           >  7:45556/1‑149 (MQ=255)
                                       aCCTGGCCCATCTCGCCGAGCGTCTGGACGTCAGCTGTGACTGGTCACACATCCTCTCGGTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCTCGGCAATGGAt                                                                                                           <  1:371306/149‑1 (MQ=255)
                                       aCCTGGCCCATCTCGCCGAGCGTCTGGACGTCAGCTGTGACTGGTCACACATCCTCTCGGTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCTCGGCAATGGAt                                                                                                           >  5:319396/1‑149 (MQ=255)
                                        ccTGGCCCATCTCGCCGAGCGTCTGGACGTCAGCTGTGACTGGTCACACATCCTCTCGGTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACGGGCCACAGGTGGTGTTCCTCGACGAGTCCACCTCGGCAATGGATg                                                                                                          <  1:266885/149‑1 (MQ=255)
                                            gCCCATCTCGCCGAGCGTCTGGACGTCAGCTGTGACTGGTCACACATCCTCTCGGTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCTCGGCAATGGATGAAg                                                                                                       <  4:170821/148‑1 (MQ=255)
                                               cATCTCGCCGAGCGTCTGGACGTCAGCTGTGACTGGTCACACATCCTCTCGGTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCTCGGCAATGGATGAAGGGCt                                                                                                   >  3:185732/1‑149 (MQ=255)
                                                                ggACGTCAGCTGTGACTGGTCACACATCCTCTCGGTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCTCGGCAATGGATGAAGGGCTCGAGCATGCCCTGTATg                                                                                  >  3:192157/1‑149 (MQ=255)
                                                                 gACGTCAGCTGTGACTGGTCACACATCCTCTCGGTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCAcc                                                                                                                       >  7:96963/1‑111 (MQ=255)
                                                                 gACGTCAGCTGTGACTGGTCACACATCCTCTCGGTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCAcc                                                                                                                       <  8:96963/111‑1 (MQ=255)
                                                                 gACGTCAGCTGTGACTGGTCACACATCCTCTCGGTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCTCGGCAATGGATGAAGGGCTCGAGCATGCCCTGTAt                                                                                   <  6:7870/147‑1 (MQ=255)
                                                                    gTCAGCTGTGACTGGTCACACATCCTCTCGGTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGCTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCTCGGCAATGGATGAAGGGCTCGAGCATGCCCTGTATGCgtt                                                                              >  3:173618/1‑149 (MQ=255)
                                                                       aGCTGTGACTGGTCACACATCCTCTCGGTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCTCGGCAATGGATGAAGGGCTCGAGCATGCCCTGTATGCgttgtt                                                                           >  3:141130/1‑149 (MQ=255)
                                                                          tgtgACTGGTCACACATCCTCTCGGTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCTCGGCAATGGATGAAGGGCTCGAGCATGCCCTGTATGCGTTGTTGCg                                                                        >  5:363594/1‑149 (MQ=255)
                                                                          tgtgACTGGTCACACATCCTCTCGGTGGGCGAGCAGCAGCGAATGGCGTTCGCCGGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCTCGGCAATGGATGAAGGGCTCGAGCATGGCCTGTATGCGTTGTTGCg                                                                        >  4:205702/1‑149 (MQ=255)
                                                                              aCTGGTCACACATCCTCTCGGTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCTCGGCAATGGATGAAGGGCTCGAGCATGCCCTGTATGCGTTGTTGCGTTCg                                                                    <  6:319396/149‑1 (MQ=255)
                                                                                tGGTCACACATCCTCTCGGTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGCACGCAGGTGGTGTTCCACGACGAGACCACATCGGCAATGGATGAAGGGCTCGAGCATGCCCTGTATGCGTTGTTGCGTTCg                                                                    >  1:307863/1‑148 (MQ=255)
                                                                                  gTCACACATCCTCTCGGTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCTCGGCAATGGATGAAGGGCTCGAGCATGCCCTGTATGCGTTGTTGCGTTCg                                                                    >  6:246627/1‑145 (MQ=255)
                                                                                   tCACACATCCTCTCGGTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCTCGGCAATGGATGaa                                                                                                        <  4:191383/108‑1 (MQ=255)
                                                                                   tCACACATCCTCTCGGTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCTCGGCAATGGATGaa                                                                                                        >  3:191383/1‑108 (MQ=255)
                                                                                     acacaTCCTCTCGGTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCTCGGCAATGGATGAAGGGCTCGAGCATGCCCTGTATGCGTTGTTGCGTTCGGAGATGc                                                             >  3:116117/1‑149 (MQ=255)
                                                                                       acaTCCTCTCGGTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCTCGGCAATGGATGAAGGGCTCGAGCATGCCCTGTATGCGTTGTTGCGTTCGGAGATGc                                                             <  3:167774/147‑1 (MQ=255)
                                                                                       acaTCCTCTCGGTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCTCGGCAATGGATGAAGGGCTCGAGCATGCCCTGTATGCGTTGTTGCGTTCGGAGATGc                                                             >  4:167774/1‑147 (MQ=255)
                                                                                       acaTCCTCTCGGTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCTCGGCAATGGATGAAGCGCTCGAGCATGCCCTGTATGCGTTGTTGCGTTCGGAGATGcc                                                            >  5:174838/1‑148 (MQ=255)
                                                                                        ttctctctCGGTGGGCGAGGAGGAGCGGCTTGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTTGTGTTCCTCGACGAGTCCACCTTGGCAATGGATGAAGGGCTCGAGCATGCCCTGTATGCGTTGTTGCGTTCGGAGATGCCGa                                                          <  2:138085/145‑1 (MQ=255)
                                                                                        caTCCTCTCGGTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCTCGGCAATGGATGAAGGGCTCGAGCATGCCCTGTATGCGTTGTTGCGTTCGGAGATGCCGa                                                          <  6:319502/149‑1 (MQ=255)
                                                                                         aTCCTCTCGGTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCTCGGCAATGGATGAAGGGCTCGAGCATGCCCTGTATGCGTTGTTGCGTTCGGAGATGCCGAg                                                         >  2:107525/1‑149 (MQ=255)
                                                                                             tctcGGTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCTTGGCAATGGATGAAGGGCTCGAGCATGCCCTGTATGCGTTGTTGCGTTCGGAGATGCCGa                                                          >  1:138085/1‑144 (MQ=255)
                                                                                             tctcGGTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCTCGGCAATGGATGAAGGGCTCGAGCATGCCCTGTATGCGTTGTTGCGTTCGGAGATGCCGAGTGCa                                                     >  6:129147/1‑149 (MQ=255)
                                                                                              ctcGGTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGccaccgagaggatgtgtgaccagtcacagctgacgtccagacgctcggcgagatgggccaggttgacctggcgcaacgcctgctgcatgagcagttc                                                     <  5:102990‑M2/149‑98 (MQ=255)
                                                                                               tcGGTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGccaccgagaggatgtgtgaccagtcacagctgacgtccagacgctcggcgagatgggccagg                                                                                        <  8:199972‑M2/113‑63 (MQ=255)
                                                                                               tcGGTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGccaccgagaggatgtgtgaccagtcacagctgacgtccagacgctcggcgagatgggccagg                                                                                        >  7:199972‑M2/1‑51 (MQ=255)
                                                                                                 ggTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCTCGGCAATGGATGAAGGGCTCGAGCATGCCCTGTATGCGTTGTTGCGTTCGGAGATGCCGAGTGCATTg                                                  <  4:192157/148‑1 (MQ=255)
                                                                                                       cGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCTCGGCAATGGATGAAGGGCTCGAGCATGCCCTGTATGCGTTGTTGCGTTCGGAGATGCCGAGTGCATTGCTGGTCa                                           <  5:246627/149‑1 (MQ=255)
                                                                                                       cGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCTCGGCAATGGATGAAGGGCTCGAGCATGCCCTGTATGCGTTGTTGCGTTCGGAAATGCCGAGTGCATTGCTGGTCa                                           <  5:53902/149‑1 (MQ=255)
                                                                                                          gcagcagcGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCTCGGCAATGGATGAAGGGCTCGAGCATGCCCTGTATGCATTGTTGCGTTCGGAGATGCCGAGTGCATTGCTGGTCAgtg                                        <  6:270011/149‑1 (MQ=255)
                                                                                                            agcagcGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCTCGGCAATGGATGAAGGGCTCGAGCATGCCCTGTATGCGTTGTTGCGTTCGGAGATGCCGAGTGCATTGCTGGTCAGTGTc                                      >  7:48416/1‑149 (MQ=255)
                                                                                                             gcagcGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCTCGGCAATGGATGAAGGGCTCGAGCATGCCCTGTATGCGTTGTTGCGTTCGGAGATGCCGAGTGCATTGCTGGTCAGTGTCg                                     <  8:45556/149‑1 (MQ=255)
                                                                                                             gcagcGCCTGGCGTTCGCCCGGGTGCTGCTGCTCGCccaccgagaggatgtgtgaccagtcacagctgacgtccagacgctcggcgagatgggccaggttgacctggcgcaacgcctgctgcatgagcagttcatccttggggttgctg                                     <  5:364277‑M2/149‑114 (MQ=255)
                                                                                                             gcagcGACTGGCGTTCGCGCGTGTGCTGTTCAACCGGCCACAGGTGGTGTTGCTCGACGAGTCCACCTCGGCAATGGATGAAGGGATCGAGCATGCCCTGTATGCGTTGTTGCGTTCGGAGATGCCGAGTGCATTGCTGGTCATTGTCg                                     <  2:139907/149‑1 (MQ=255)
                                                                                                               agcGCCTGGCGTTCGCCCGGCTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCTCGGCAATGGATGAAGGGCTCGAGCATGCCCTGTATGCGTTGTTGCGTTCGGAGATGCCGAGTGCATTGCTGGTCAGTGTCGGc                                   <  4:173618/149‑1 (MQ=255)
                                                                                                                   ccTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCTCGGCAATGGATGAAGGGCTCGAGCATGCCCTGTATGCGTTGTTGCGTTCGGAGATGCCGAGTGCATTg                                                  <  1:191511/130‑1 (MQ=255)
                                                                                                                   ccTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCTCGGCAATGGATGAAGGGCTCGAGCATGCCCTGTATGCGTTGTTGCGTTCGGAGATGCCGAGTGCATTg                                                  >  2:191511/1‑130 (MQ=255)
                                                                                                                    cTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCTCGGCAATGGATGAAGGGCTCGAGCATGccc                                                                                        >  6:38197/1‑91 (MQ=255)
                                                                                                                    cTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCTCGGCAATGGATGAAGGGCTCGAGCATGccc                                                                                        <  5:38197/91‑1 (MQ=255)
                                                                                                                        cGTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCTCGGCAATGGATGAAGGGCTCGAGCATGCCCTGTATGCGTTGTTGCGTTCGGAGATGCCGAGTGCATTGCTGGTCAGTGTCGGCCACCgcagc                          <  8:48416/149‑1 (MQ=255)
                                                                                                                        cGTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCTCGGCAATGGATGAAGGGCTCGAGCATGCCCTGTATGCGTTGTTGCGTTCGGAGATGCCGAGTGCATTGCTGGTCAGTGTCGGCCACCgcagc                          <  1:107525/149‑1 (MQ=255)
                                                                                                                         gTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCTCGGCAATGGATGAAGGGCTCGAGCATGCCCTGTATGCGTTGTTGCGTTCGGAGATGCCGAGTGCATTGCTGGTCAGTGTCGGCCACCgcagca                         <  6:83783/149‑1 (MQ=255)
                                                                                                                         gTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCTCGGCAATGGATGAAGGGCTCGAGCATGCCCTGTATGCGTTGTTGCGTTCGGAGATGCCGAGTGCATTGCTGGTCAGTGTCGGCCACCgcagca                         >  4:24070/1‑149 (MQ=255)
                                                                                                                          ttCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACATCGGCAATGGATGAAGGGCTCGAGCATGCCCTGTATGCGTTGTTGCGTTCGGAGATGCCGAGTGCATTGCTGGTCAGTGTCGGCCACCgcagca                         >  5:245617/1‑148 (MQ=255)
                                                                                                                               ccGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCTCGGCAATGGATGAAGGGCTCGAGCATGCCCTGTATGCGTTGTTGCGTTCGGAGATGCCGAGTGCATTGCTGGTCAGTGTCGGCCACCGCAGCACACTgg                   >  7:110371/1‑149 (MQ=255)
                                                                                                                               ccGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCTCGGCAATGGATGAAGGGCTCGAGCATGCCCTGTATGCGTTGTTGCGTTCGGAGATGCCGAGTGCATTGCTGGTCAGTGTCGGCCACCGCAGCACACTgg                   <  3:267452/149‑1 (MQ=255)
                                                                                                                                 gggTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCTCGGCAATGGATGAAGGGCTCGAGCATGCCCTGTATGCGTTGTTGCGTTCGGAGATGCCGAGTGCATTGCTGGTCAGTGTCGGCCACCGCAGCACACTGGCa                 <  7:228913/149‑1 (MQ=255)
                                                                                                                                        gTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCTCGGCAATGGATGAAGGGCTCGAGCATGCCCTGTATGCGTTGTTGCGTTCGGAGATGCCGAGTGCATTGCTGGTCAGTGTCGGCCACCGCAGCACACTGGCAGCGTTc           >  5:89400/1‑148 (MQ=255)
                                                                                                                                         ttCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCTCGGCAATGGATGAAGGGCTCGAGCATGCCCTGTATGCGTTGTTGCGTTCGGAGATGCCGAGTGCATTGCTGGTCAGTGTCGGCCACCGCAGCACACTGGCAGCGTTcc          <  8:110371/148‑1 (MQ=255)
                                                                                                                                         ttCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCTCGGCAATGGATGAAGGGCTCGAGCATGCCCTGTATGCGTTGTTGCGTTCGGAGATGCCGAGTGCATTGCTGGTCAGTGTCGGCCACCGCAGCACACTGGCAGCGTTc           <  6:157049/147‑1 (MQ=255)
                                                                                                                                         ttCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCTCGGCAATGGATGAAGGGCTCGAGAATGCCCTGTATGCGTTGTTGCGTTCGGAGATGCCGAGTGCATTGCTGGTCAGTGTCGGCCACCGCAGCACACTGGCAGCGTTCca         >  6:180298/1‑149 (MQ=255)
                                                                                                                                            aaCCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCTCGGCAATGGATGAAGGGCTCGAGCATGCCCTGTATGCGTTGTTGCGTTCGGAGATGCCGAGTGCATTGCTGGTCAGTGTCGGCCACCGCAGCACACTGGCAGCGTTCCacac      >  3:160146/1‑149 (MQ=255)
                                                                                                                                                ggCCACAGGTGGTGTTCCTCGACGAGTCCACCTCGGCAATGGATGAAGGGCTCGAGCATGCCCTGTATGCGTTGTTGCGTTCGGAGATGCCGAGTGCATTGCTGGTCAGTGTCGGCCACCGCAGCACACTGGCAGCGTTCCAcacccac  <  4:185732/149‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                    
AGGATGAACTGCTCATGCAGCAGGCGTTGCGCCAGGTCAACCTGGCCCATCTCGCCGAGCGTCTGGACGTCAGCTGTGACTGGTCACACATCCTCTCGGTGGGCGAGCAGCAGCGCCTGGCGTTCGCCCGGGTGCTGTTCAACCGGCCACAGGTGGTGTTCCTCGACGAGTCCACCTCGGCAATGGATGAAGGGCTCGAGCATGCCCTGTATGCGTTGTTGCGTTCGGAGATGCCGAGTGCATTGCTGGTCAGTGTCGGCCACCGCAGCACACTGGCAGCGTTCCACACCCAC  >  NC_002947/2555545‑2555837

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.