New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2777954 =	47 (0.780)	3 (0.050)	3/252	NT	6.0%	coding (432/831 nt)	PP_2430	AraC family transcriptional regulator
	?	NC_002947	2777997 =	49 (0.850)					coding (389/831 nt)	PP_2430	AraC family transcriptional regulator

CAGGAAGTCCCGGGCGCGCTGTGCGGTCAGCGGCAGGCGCGGGTCGGGGTTGATGCGGCGGCGCCAGTGCAGGTGGCGGGTCAGGCAGGCCAGCAGATCGTCCATGGCCGTTTGCCTGACGATGCGCAAGTCCTGGTCATGCACGGCCCGGAAGGCCAGGGCGGTGGCCCGCGCCAGGCGTTCGTCGTGGCACAGGGTGTCGGCAAAGCTGGGCAGGCTGTCGCCCGGCGCGTGCTCGTAC‑AGCGCGCGCAGCTGTTGGTCGAGCCAGGCGGGCTCCAGGTACAGCGTCGAATAGGT  >  NC_002947/2777849‑2778145                                                                                                                                                     |                                                                                                                                                      cAGGAAGTCCCGGGCGCGCTGTGCGGTCAGCGGCAGGCGCGGGTCGGGGTTGATGCGGCGGCGCCAGTGCAGGTGGCGGGGCAGGCTGGCCAGCAGATCGTCCATGGCCGTTTGCCTGACGATGCGCAAGTCCTGGTCATGCACGGccc                                                                                                                                                       <  5:214010/149‑1 (MQ=255)    gAAGTCCCGGGCGCGCTGTGCGGTCAGCGGCAGGCGCGGGTCGGGGTTGATGCGGCGGCGCCAGTGCAGGTGGCGGGTCAGGCAGGCCAGCAGATCGTCCATGGCCGTTTGCCTGACGATGCGCAAGTCCTGGTCATGCACGGCCCgg                                                                                                                                                     >  3:297913/1‑148 (MQ=255)     cgcgcgctgtacgagcacgcgccgggcgacagcctgcccagctttgccgacaccctgtgccacgacgaacgcctggcgcgggccaccgccctggccttccgGGCCGTTTGCCTGACGATGCGCAAGTCCTGGTCATGCACGGCCCGGaa                                                                                                                                                   >  8:187978‑M1/102‑149 (MQ=255)      aGTCCCGGGCGCGCTGTGCGGTCAGCGGCAGGCGCGGGTCGGGGTTGATGCGGCGGCGCCAGTGCAGGTGGCGGGTCAGGCAGGCCAGCAGATCGTCCATGGCCGTTTGCCTGACGATGCGCAAGTCCTGGTCATGCACGGCCCGGAAg                                                                                                                                                  <  2:278938/149‑1 (MQ=255)          ccGGGCGCGCTGTGCGGTCAGCGGCAGGCGCGGGTCGGGGTTGATGCGGCGGCGCCAGTGCAGGTGGCGGGTCAGGCAGGCCAGCAGATCGTCCATGGCCGTTTGCCTGACGATGCGCAAGTCCTGGTCATGCACGGCCCGGAAGGc                                                                                                                                                >  7:76990/1‑147 (MQ=255)                gcgcTGTGCGGTCAGCGGCAGGCGCGGGTCGGGGTTGATGCGGCGGCGCCAGTGCAGGTGGCGGGTCAGGCAGGCCAGCAGATCGTCCATGGCCGTTTGCCTGACGATGCGCAAGTCCTGGTCATGCACGGCCCGGAAGGCCAGGGCgg                                                                                                                                        >  3:9806/1‑149 (MQ=255)                  gcTGTGCGGTCAGCGGCAGGCGCGGGTCGGGGTTGATGCGGCGGCGCCAGTGCAGGTGGCGGGTCAGGCAGGCCAGCAGATCGTCCATGGCCGTTTGCCTGACGATGCGCAAGTCCTGGTCATGCACGGCCCGGAAGGCCAGGGCGGTg                                                                                                                                      <  3:264509/149‑1 (MQ=255)                    tgtgCGGTCAGCGGCAGGCGCGGGTCGGGGTTGATGCGGCGGCGCCAGTGCAGGTGGCGGGTCAGGCAGGCCAGCAGATCGTCCATGGCCGTTTGCCTGACGATGCGCAAGTCCTGGTCATGCACGGCCCGGAAGGCCAGGGCGGTGGc                                                                                                                                    >  6:189435/1‑149 (MQ=255)                           tCAGCGGCAGGCGCGGGTCGGGGTTGATGCGGCGGCGCCAGTGCAGGTGGCGGGTCAGGCAGGCCAGCAGATCGTCCATGGCCGTTTGCCTGACGATGCGCAAGTCCTGGTCATGCACGGCCCGGAAGGCCAGGGCGGTGGCCCGCGcc                                                                                                                             >  1:261339/1‑149 (MQ=255)                             aGCGGCAGGCGCGGGTCGGGGTTGATGCGGCGGCGCCAGTGCAGGTGGCGGGTCAGGCAGGCCAGCAGATCGTCCATGGCCGTTTGCCTGACGATGCGCAAGTCCTGGTCATGCACGGCCCGGAAGGCCAGGGCGGTGGCCCGCGCCAg                                                                                                                           >  4:227238/1‑149 (MQ=255)                              gCGGCAGGCGCGGGTCGGGGTTGATGCGGCGGCGCCAGTGCAGGTGGCGGGTCAGGCAGGCCAGCAGATCGTCCATGGCCGTTTGCCTGACGATGCGCAAGTCCTGGTCATGCACGGCCCGGAAGGCCAGGGCGGTGGCCCGCGCCAgg                                                                                                                          >  5:228085/1‑149 (MQ=255)                                        cgGGTCGGGGTTGATGCGGCGGCGCCAGTGCAGGTGGCGGGTCAGGCAGGCCAGCAGATCGTCCATGGCCGTTTGCCTGACGATGCGCAAGTCCTGGTCATGCACGGCCCGGAAGGCCAGGGCGGTGGCCCGCGCCAGGCGTTcgtcgt                                                                                                                <  4:297913/149‑1 (MQ=255)                                        cgGGTCGGGGTTGATGCGGCGGCGCCAGTGCAGGTGGCGGGTCAGGCAGGCCAGCAGATCGTCCATGGCCGTTTGCCTGACGATGCGCAAGTCCTGGTCATGCACGGCCCGGAAGGCCAGGGCGGTGGCCCGCGCCAGGCGTTcgtcgt                                                                                                                <  6:174562/149‑1 (MQ=255)                                        cgGGTCGGGGTTGATGCGGCGGCGCCAGTGCAGGTGGCGGGTCAGGCAGGCCAGCAGATCGTCCATGGCCGTTTGCCTGACGATGCGCAAGTCCTGGTCATGCACGGCCCGGAAGGCCAGGGCGGTGGCCCGCGCCAGGCGTTcgtcgt                                                                                                                <  2:183361/149‑1 (MQ=255)                                          ggTCGGGGTTGATGCGGCGGCGCCAGTGCAGGTGGCGGGTCAGGCAGGCCAGCAGATCGTCCATGGCCGTTTGCCTGACGATGCGCAAGTCCTGGTCATGCACGGCCCGGAAGGCCAGGGCGGTGGCCCGCGCCAGGCGTTCGTCGTgg                                                                                                              <  1:272360/149‑1 (MQ=255)                                           gTCGGGGTTGATGCGGCGGCGCCAGTGCAGGTGGCGGGTCAGGCAGGCCAGCAGATCGTCCATGGCCGTTTGCCTGACGATGCGCAAGTCCTGGTCATGCACGGCCCGGAAGGCCAGGGCGGTGGCCCGCGCCAGGCGTTCGTCGTgg                                                                                                              >  6:101827/1‑148 (MQ=255)                                           gTCGGGGTTGATGCGGCGGCGCCAGTGCAGGTGGCGGGTCAGGCAGGCCAGCAGATCGTCCATGGCCGTTTGCCTGACAATGCGCAAGTCCTGGTCATGCACGGCCCGGAAGGCCAGGGCGGTGGCCCGCGCCAGGCGTTCGTCGTGGc                                                                                                             <  5:380142/149‑1 (MQ=255)                                                      tGCGGCGGCGCCAGTGCAGGTGGCGGGTCAGGCAGGCCAGCAGATCGTCCATGGCCGTTGGCCTGACGATGCGCAAGTCCTGGTCATGCACGGCCCGGAAGGCCAGGGCGGTGGCCCGCGCCAGGCGTTCGTCGTGGCACAGGGTGTCg                                                                                                  <  5:292367/149‑1 (MQ=255)                                                               gcCAGTGCAGGTGGCGGGTCAGGCAGGCCAGCAGATCGTCCATGGCCGTTTGCCTGACGATGCGCAAGTCCTGGTCATGCACGGCCCGGAAGGCCAGGGCGGTGGCCCGCGCCAGGCGTTCGTCGTGGCACAGGGTGTCGGCAAAGCTg                                                                                         >  3:216988/1‑149 (MQ=255)                                                               gcCAGTGCAGGGGGCGGGTCAGGCAGGCCAGCAGATCGTCCATGGCCGTTTGCCTGACGATGCGCAAGTCCTGGTCATGCACGGCCCGGAAGGCCAGGGCGGTGGCCCGCGCCAGGCGTTCGTCGTGGCACAGGGTGTCGGCAAAGCTg                                                                                         <  6:38999/149‑1 (MQ=255)                                                                  aGTGCAGGTGGCGGGTCAGGCAGGCCAGCAGATCGTCCATGGCCGTTTGCCTGACGATGCGCAAGTCCTGGTCATGCACGGCCCGGAAGGCCAGGGCGGTGGCCCGCGCCAGGCGTTCGTCGTGGCACAGGGTGTCGGCAAAGCTggg                                                                                       >  6:21257/1‑148 (MQ=255)                                                                      cAGGTGGCGGGTCAGGCAGGCCAGCAGATCGTCCATGGCCGTTTGCCTGACGATGCGCAAGTCCTGGTCATGCACGGCCCGGAAGGCCAGGGCGGTGGCCCGCGCCAGGCGTTCGTCGTGGCACAGGGTGTCGGCAAAGCTGGGCAgg                                                                                   <  3:227238/148‑1 (MQ=255)                                                                       aGGTGGCGGGTCAGGCAGGCCAGCAGATCGTCCATGGCCGTTTGCCTGACGATGCGCAAGTCCTGGTCATGCACTGCCCGGAAGGCCAGGGCGGTGGCCCGCGCCAGGCGTTCGTCGTGGCACAGGGTGTCGGCAAAGCTGGGCAGGCt                                                                                 >  8:53470/1‑149 (MQ=255)                                                                       aGGTGGCGGGTCAGGCAGGCCAGCAGATCGTCCATGGCCGTTTGCCTGACGATGCGCAAGTCCTGGTCATGCACGGCCCGGAAGGCCAGGGCGGTGGCCCGCGCCAGGCGTTCGTCGTGGCACAGGGTGTCGGCAAAGCTGGGCAGGCt                                                                                 <  8:76990/149‑1 (MQ=255)                                                                         gTGGCGGGTCAGGCAGGCCAGCAGATCGTCCATGGCCGTTTGCCTGACGATGCGCAAGTCCTGGTCATGCACGGCCCGGAAGGCCAGGGCGGTGGCCCGCGCCAGGCGTTCGTCGTGGCACAGGGTGTCGGCAAAGCTGGGCAGGCTGt                                                                               >  6:80049/1‑149 (MQ=255)                                                                          tGGCGGGTCAGGCAGGCCAGCAGATCGTCCATGGCCGTTTGCCTGACGATGCGCAAGTCCTGGTCATGCACGGCCCGGAAGGCCAGGGCGGTGGCCCGCGCCAGGCGTTCGTCGTGGCACAGGGTGTCGGCAAAGCTGGGCAGGCTGTc                                                                              >  2:207444/1‑149 (MQ=255)                                                                              gggTCAGGCAGGCCAGCAGATCGTCCATGGCCGTTTGCCTGACGATGCGCAAGTCCTGGTCATGCACGGCCCGGAAGGCCAGGGCGGTGGCCCGCGCCAGGCGTTCGTCGTGGCACAGGGTGTCGGCAAAGCTGGGCAGGCTGTCGccc                                                                          <  8:145266/149‑1 (MQ=255)                                                                                     gcaggcCAGCAGATCGTCCATGGGCGTTTGCCTGACGATGCGCAAGTCCTGGTCATGCACGGCCCGGAAGGCCAGGGCGGTGGCCCGCGCCAGGCGTTCGTCGTGGCACAGGGTGTCGGCAAAGCTGGGCAGGCTGTCGCCCGGCGCGt                                                                   >  6:296447/1‑149 (MQ=255)                                                                                     gcaggcCAGCAGATCGTCCATGGCCGTTTGCCTGACGATGCGCAAGTCCTGGTCATGCACGGCCCGGAAGGCCAGGGCGGTGGCCCGCGCCAGGCGTTCGTCGTGGCACAGGGTGTCGGCAAAGCTGGGCAGGCTGTCGCCCGGCGCGt                                                                   >  8:219007/1‑149 (MQ=255)                                                                                     gcaggcCAGCAGATCGTCCATGGCCGTTTGCCTGACGATGCGCAAGTCCTGGTCATGCACGGCCCGGAAGGCCAGGGCGGTGGCCCGCGCCAGGCGTTCGTCGTGGCACAGGGTGTCGGCAAAGCTGGGCAGGCTGTCGCCCGGCGCGt                                                                   >  3:168245/1‑149 (MQ=255)                                                                                         gcCAGCAGATCGTCCATGGCCGTTTGCCTGACGATGCGCAAGTCCTGGTCATGCACGGCCCGGAAGGCCAGGGCGGTGGCCCGCGCCAGGCGTTCGTCGTGGCACAGGGTGTCGGCAAAGCTGGGCAGGCTGTCGCCCGGCGCGTGCTc                                                               >  3:143990/1‑149 (MQ=255)                                                                                          ccAGCAGATCGTCCATGGCCGTTTGCCTGACGATGCGCAAGTCCTGGTCATGCACGGCCCGGAAGGCCAGGGCGGTGGCCCGCGCCAGGCGTTCGTCGTGGCACAGGGTGTCGGCAAAGCTGGGCAGGCTGTCGCCCGGCGCGTGCTCg                                                              >  4:345173/1‑149 (MQ=255)                                                                                              cagATCGTCCATGGCCGTTTGCCTGACGATGCGCAAGTCCTGGTCATGCACGGCCCGGAAGGCCAGGGCGGTGGCCCGCGCCAGGCGTTCGTCGTGGCACAGGGTGTCGGCAAAGCTGGGCAGGCTGTCGCCCGGCGCGTGCTCg                                                              <  4:87656/145‑1 (MQ=255)                                                                                              cagATCGTCCATGGCCGTTTGCCTGACGATGCGCAAGTCCTGGTCATGCACGGCCCGGAAGGCCAGGGCGGTGGCCCGCGCCAGGCGTTCGTCGTGGCACAGGGTGTCGGCAAAGCTGGGCAGGCTGTCGCCCGGCGCGTGCTCg                                                              >  3:87656/1‑145 (MQ=255)                                                                                                 aTCGTCCATGGCCGTTTGCCTGACGATGCGCAAGTCCTGGTCATGCACGGCCCGGAAGGCCAGGGCGGTGGCCCGCGCCAGGCGTTCGTCGTGGCACAGGGTGTCGGCAAAGCTGGGCAGGCTGTCGCCCGGCGCGTGCTCGTAC‑Agcg                                                      >  8:49830/1‑149 (MQ=255)                                                                                                    gTCCATGGCCGTTTGCCTGACGATGCGCAAGTCCTGGTCATGCACGGCCCGGAAGGCCAGGGCGGTGGCCCGCGCCAGGCGTTCGTCGTGGCACAGGGTGTCGGCAAAGCTGGGCAGGCTGTCGCCCGGCGCGTGCTCGTAC‑Agcgcgc                                                   <  2:273191/149‑1 (MQ=255)                                                                                                     ttccgggccgtgcatgaccaggacttgcgcatcgtcaggcaaacggccCGGAAGGCCAGGGCGGTGGCCCGCGCCAGGCGTTCGTCGTGGCACAGGGTGTCGGCAAAGCTGGGCAGGCTGTCGCCCGGCGCGTGCTCGTAC‑Agcgcgcg                                                  >  8:187978‑M2/49‑149 (MQ=255)                                                                                                     tCCATGGCCGTTTGCCTGACGATGCGCAAGTCCTGGTCATGCACGGCCCGGAAGGCCAGGGCGGTGGCCCGCGCCAGGCGTTCGTCGTGGCACAGGGTGTCGGCAAAGCTGGGCAGGCTGTCGCCCGGCGCGTGCTCGTAC‑Agcgcgcg                                                  <  4:216988/149‑1 (MQ=255)                                                                                                     tCCATGGCCGTTTGCCTGACGATGCGCAAGTCCTGGTCATGCACGGCCCGGAAGGCCAGGGCGGTGGCCCGCGCCAGGCGTTCGTCGTGGCACAGGGTGTCGGCAAAGCTGGGCAGGCTGTCGCCCGGCGCGTGCTCGTAC‑Agcgcgcg                                                  >  7:173474/1‑149 (MQ=255)                                                                                                       cATGGCCGTTTGCCTGACGATGCGCAAGTCCTGGTCATGCACGGCCCGGAAGGCCAGGGCGGTGGCCCGCGCCAGGCGTTCGTCGTGGCACAGGGTGTCGGCAAAGCTGGGCAGGCTGTCGCCCGGCGCGTGCTCGTAC‑Agcgcgcg                                                  >  2:317499/1‑147 (MQ=255)                                                                                                       cATGGCCGTTTGCCTGACGATGCGCAAGTCCTGGTCATGCACGGCCCGGAAGGCCAGGGCGGTGGCCCGCGCCAGGCGTTCGTCGTGGCACAGGGTGTCGGCAAAGCTGGGCAGGCTGTCGCCCGGCGCGCGCT‑GTACGAgcacgcgcc                                                <  5:101827/149‑2 (MQ=255)                                                                                                        aTGGCCGTTTGCCTGACGATGCGCAAGTCCTGGTCATGAACGGCCCGGAAGGCCAGGGCGGTGGCCCGCGCCAGGCGTTCGTCGTGGCACAGGGTGTCGGCAAAGCTGGGCAGGCTGTCGCCCGGCGCGTCCTCGTAC‑AGCGCGCGCAg                                               >  1:97645/1‑149 (MQ=255)                                                                                                            ccgtgcatgaccaggacttgcgcatcgtcaggcaaacggccCGGAAGGCCAGGGCGGTGGCCCGCGCCAGGCGTTCGTCGTGGCACAGGGTGTCGGCAAAGCTGGGCAGGCTGTCGCCCGGCGCGTGCTCGTAC‑AGCGCGCGCAGCTGt                                           >  5:226581‑M2/42‑149 (MQ=255)                                                                                                             cgtgcatgaccaggacttgcgcatcgtcaggcaaacggccCGGAAGGCCAGGGCGGTGGCCCGCGCCAGGCGTTCGTCGTGGCACAGGGTGTCGGCAAAGCTGGGCAGGCTGTCGCCCGGCGCGTGCTCGTAC‑AGCGCGCGCAGCTGtt                                          <  6:226581‑M2/109‑1 (MQ=255)                                                                                                             CGTTTGCCTGACGATGCGCAAGTCCTGGTCATGCACGGCCCGGAAGGCCAGGGCGGTGGCCCGCGCCAGGCGTTCGTCGTGGCACAGGGTGTCGGCAAAGCTGGGCAGGCTGTCGCCCGGCGCGTGCTCGTAC‑AGCGCGCGCAGCTGtt                                          <  6:340532‑M1/149‑1 (MQ=255)                                                                                                               TTTGCCTGACGATGCGCAAGTCCTGGTCATGCACGGCCCGGAAGGCCAGGGCGGTGGCCCGCGCCAGGCGTTCGTCGTGGCACAGGGTGTCGGCAAAGCTg                                                                                         >  7:216128‑M1/1‑101 (MQ=255)                                                                                                               TTTGCCTGACGATGCGCAAGTCCTGGTCATGCACGGCCCGGAAGGCCAGGGCGGTGGCCCGCGCCAGGCGTTCGTCGTGGCACAGGGTGTCGGCAAAGCTg                                                                                         <  8:216128‑M1/101‑1 (MQ=255)                                                                                                                   ccTGACGATGCGCAAGTCCTGGTCATGCACGGCCCGGAAGGCCAGGGCGGTGGCCCGCGCCAGGCGTTCGTCGTGGCACAGGGTGTCGGCAAAGCTggg                                                                                       >  8:352696/1‑99 (MQ=255)                                                                                                                   ccTGACGATGCGCAAGTCCTGGTCATGCACGGCCCGGAAGGCCAGGGCGGTGGCCCGCGCCAGGCGTTCGTCGTGGCACAGGGTGTCGGCAAAGCTggg                                                                                       <  7:352696/99‑1 (MQ=255)                                                                                                                   ccTGACGATGCGCAAGTCCTGGTCATGCACGGCCCGGAAGGCCAGGGCGGTGGCCCGCGCCAGGCGTTCGTCGTGGCACAGGGTGTCGGCAAAGCTGGGCAGGCTGTCGCCCGGCGCGTGCTCGTAC‑AGCGCGCGCAGCTGTTGGTCGa                                    <  5:296447/149‑1 (MQ=255)                                                                                                                         gATGCGCAAGTCCTGGTCATGCACGGCCCGGAAGGCCAGGGCGGTGGCCCGCGCCAGGCGTTCGTCGTGGCACAGGGTGTCGGCAAAGCTGGGCAGGCTGTCGCCCGGCGCGTGCTCGTAC‑AGCGCGCGCAGCTGTTGGTCGAGCCAgg                              >  8:82508/1‑149 (MQ=255)                                                                                                                          aTGCGCAAGTCCTGGTCATGCACGGCCCGGAAGGCCAGGGCGGTGGCCCGCGCCAGGCGTTCGTCGTGGCACAGGGTGTCGGCAAAGCTGGGCAGGCTGTCGCCCGGCGCGTGCTCGTAC‑AGCGCGCGCAGCTGTTGGTCGAGCCAGGc                             <  3:355325/149‑1 (MQ=255)                                                                                                                           tGCGCAAGTCCTGGTCATGCACGGCCCGGAAGGCCAGGGCGGTGGCCCGCGCCAGGCGTTCGTCGTGGCACAGGGTGTCGGCAAAGCTGGGCAGGCTGTCGCCCGGCGCGTGCTCGTAC‑AGCGCGCGCAGCTGTTGGTCGAGCCAGGCg                            <  5:189435/149‑1 (MQ=255)                                                                                                                               cAAGTCCTGGTCATGCACGGCCCGGAAGGCCAGGGCGGTGGCCCGCGCCAGGCGTTCGTCGTGGCACAGGGTGTCGGCAAAGCTGGGCAGGCTGTCGCCCGGCGCGTGCTCGTAC‑AGCGCGCGCAGCTGTTGGTCGAGCCAGGCGGGCt                        >  1:248221/1‑149 (MQ=255)                                                                                                                                     cTGGTCATGCACGGCCCGGAAGGCCAGGGCGGTGGCCCGCGCCAGGCGTTCGTCGGGGCACAGGGTGGCGGCAAAGCTGGGCAGGCTGTCGCCCGGCGCGTGCTCGTAC‑AGCGCGCGCAGCTGTTGGGCGAGCCAGGCGGGCTCCAGGt                  <  8:33519/149‑1 (MQ=255)                                                                                                                                       ggTCATGCACGGCCCGGAAGGCCAGGGCGGTGGCCCGCGCCAGGCGTTCGTCGTGGCACAGGGTGTCGGCAAAGCTGGGCAGGCTGTCGCCCGGCGCGTGCTCGTAC‑AGCGCGCGCAGCTGTTGGTCGAGCCAGGCGGGCTCCAGGTa                 >  7:287246/1‑148 (MQ=255)                                                                                                                                        gTCATGCACGGCCCGGAAGGCCAGGGCGGTGGCCCGCGCCAGGCGTTCGTCGTGGCACAGGGTGTCGGCAAAGCTGGGCAGGCTGTCGCCCGGCGCGTGCTCGTAC‑AGCGCGCGCAGCTGTTGGTCGAGCCAGGCGGGCTCCAGGTa                 >  2:213992/1‑147 (MQ=255)                                                                                                                                        gTCATGCACGGCCCGGAAGGCCAGGGCGGTGGCCCGCGCCAGGCGTTCGTCGTGGCACAGGGTGTCGGCAAAGCTGGGCAGGCTGTCGCCCGGCGCGTGCTCGTAC‑AGCGCGCGCAGCTGTTGGTCGAGCCAGGCGGGCTCCAGGTACa               <  1:317499/149‑1 (MQ=255)                                                                                                                                          cATGCACGGCCCGGAAGGCCAGGGCGGTGGCCCGCGCCAGGCGTTCGTCGTGGCACAGGGTGTCGGCAAAGCTGGGCAGGCTGTCGCCCGGCGCGTGCTCGTAC‑AGCGCGCGCAGCTGTTGGTCGAGCCAGGCGGGCTCCAGGTACAGc             <  4:360739/149‑1 (MQ=255)                                                                                                                                              cACGGCCCGGAAGGCCAGGGCGGTGGCCCGCGCCAGGCGTTCGTCGTGGCACAGGGTGTCGGCAAAGCTGGGCAGGCTGTCGCCCGGCGCGTGCTCGTAC‑AGCGCGCGCAGCTGTTGGTCGAGCCAGGCGGGCTCCAGGTACAGCGTc          <  6:228085/148‑1 (MQ=255)                                                                                                                                                cggccCGGAAGGCCAGGGCGGTGGCCCGCGCCAGGCGTTCGTCGTGGCACAGGGTGTCGGCAAAGCTGGGCAGGCTGTCGCCCGGCGCGTGCTCGTAC‑AGCGCGCGCAGCTGTTGGTCGAGCCAGGCGGGCTCCAGGTACAGCGTCGaa       <  4:168245‑M2/144‑1 (MQ=255)                                                                                                                                                  gccCGGAAGGCCAGGGCGGTGGCCCGCGCCAGGCGTTCGTCGTGGCACAGGGTGTCGGCAAAGCTGGGCAGGCTGTCGCCCGGCGCGTGCTCGTAC‑AGCGCGCGCAGCTGTTGGTCGAGCCAGGCGGGCTCCAGGTACAGCGTCGAATa     <  2:248221‑M2/146‑1 (MQ=255)                                                                                                                                                    cCGGAAGGCCAGGGCGGGGGCCCGCGCCAGGCGTGCGGCGTGGCACAGGGTGTCGGCAAAGCTGGGCAGGCTGTCGCCCGGCGCGTGCTCGTAC‑AGCGCGCGCAGCTGTTGGTCGAGCCAGGCGGGCTCCAGGTACAGCGTCGAATAgg   <  4:9806‑M2/148‑1 (MQ=255)                                                                                                                                                     cGGAAGGCCAGGGCGGTGGCCCGCGCCAGGCGTTCGTCGTGGCACAGGGTGTCGGCAAAGCTGGGCAGGCTGTCGCCCGGCGCGTGCTCGTAC‑AGCGCGCGCAGCTGTTGGTCGAGCCAGGCGGGCTCCAGGTACAGCGTCGAATAGGt  <  8:287246/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                      CAGGAAGTCCCGGGCGCGCTGTGCGGTCAGCGGCAGGCGCGGGTCGGGGTTGATGCGGCGGCGCCAGTGCAGGTGGCGGGTCAGGCAGGCCAGCAGATCGTCCATGGCCGTTTGCCTGACGATGCGCAAGTCCTGGTCATGCACGGCCCGGAAGGCCAGGGCGGTGGCCCGCGCCAGGCGTTCGTCGTGGCACAGGGTGTCGGCAAAGCTGGGCAGGCTGTCGCCCGGCGCGTGCTCGTAC‑AGCGCGCGCAGCTGTTGGTCGAGCCAGGCGGGCTCCAGGTACAGCGTCGAATAGGT  >  NC_002947/2777849‑2778145

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.