New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3098359	46 (0.760)	3 (0.050)	3/252	NT	6.4%	coding (723/798 nt)	PP_2707	exodeoxyribonuclease III
	?	NC_002947	= 3098385	44 (0.770)					coding (749/798 nt)	PP_2707	exodeoxyribonuclease III

ACCTTCTGGGACTATTTTCGTAACCACTGGGCCCGCAATGCCGGGTTGCGAATCGATCACCTGTTGCTCAATCGCGAGCTTGCGCCTTATCTGAAACGGGCGGGTGTCGATGCATGGGTGCGCAACCAGGCCAAGGCCAGCGACCATGCGCCCGTCTGGATCGAGCTGGGTACGCGTCGTGC‑TCGGTCATAGTCAGTTCAGCACATGAACGAGCGCCGGGCTGAGGCGCTCCGACAGTAGCCGACTTCAGATTGCATTCAGATTCGGCCCCGATAATTCCCTCCGT  >  NC_002947/3098243‑3098528                                                                                                                                               |                                                                                                                                                 acCTTCTGGGACTATTTTCGTAACCACTGGGCCCGCAATGCCGGGTTGCGAATCGATCACCTGTTGCTCAATCGCGAGCTTGCGCCTTATCTGAAACGGGCGGGTGTCGATGCATGGGTGCGCAACCAGGCCAAGGCCAGCGAccatgc                                                                                                                                            <  7:279414‑M2/149‑7 (MQ=255)          gACTATTTTCGTAACCACTGGGCCCGCAATGCCGGGTTGCGAATCGATCACCTGTTGCTCAATCGCGAGCTTGCGCCTTATCTGAAACGGGCGGGTGTCGATGCATGGGTGCGCAACCCGGCCAAGGCCCGCGACCATGCGCCCGTCTg                                                                                                                                   >  8:1674/1‑149 (MQ=255)            cTATTTTCGTAACCACTGGGCCCGCAATGCCGGGTTGCGAATCGATCACCTGTTGCTCAATCGCGAGCTTGCGCCTTATCTGAAACGGGCGGGTGTCGATGCATGGGTGCGCAACCAGGCCAAGGCCAGCGACCATGCGCCCGTCTGGa                                                                                                                                 <  5:297577/149‑1 (MQ=255)             tATTTTCGTAACCACTGGGCCCGCAATGCCGGGTTGCGAATCGATCACCTGTTGCTCAATCGCGAGCTTGCGCCTTATCTGAAACGGGCGGGTGTCGATGCATGGGTGCGCAACCAGGCCAAGGCCAGCGACCATGCGCCCGTCTGGAt                                                                                                                                >  7:100291/1‑149 (MQ=255)                 ttCGTAACCACTGGGCCCGCAATGCCGGGTTGCGAATCGATCACCTGTTGCTCAATCGCGAGCTTGCGCCTTATCTGAAACGGGCGGGTGTCGATGCATGGGTGCGCAACCAGGCCAAGGCCAGCGACCATGCGCCCGTCTGGATCGa                                                                                                                             <  8:119532/148‑1 (MQ=255)                     tAACCACTGGGCCCGCAATGCCGGGTTGCGAATCGATCACCTGTTGCTCAATCGCGAGCTTGCGCCTTATCTGAAACGGGCGGGTGTCGATGCATGGGTGCGCAACCAGGCCAAGGCCAGCGACCATGCGCCCGTCTGGATCGAGCTgg                                                                                                                        >  6:16793/1‑149 (MQ=255)                     tAACCACTGGGCCCGCAATGCCGGGTTGCGAATCGATCACCTGTTGCTCAATCGCGAGCTTGCGCCTTATCTGAAACGGGCGGGTGTCGATGCATGGGTGCGCAACCAGGCCAAGGCCAGCGACCATGCGCCCGTCTGGATCGAGCTgg                                                                                                                        <  5:112254/149‑1 (MQ=255)                     tAACCACTGGGCCCGCAATGCCGGGTTGCGAATCGATCACCTGTTGCTCAATCGCGAGCTTGCGCCTTATCTGAAACGGGCGGGTGTCGATGCATGGGTCCGCACCCAGGCCAAGTCCAGCGACCATGCGCCCGTCTGGATCGAGCTgg                                                                                                                        >  3:23764/1‑149 (MQ=255)                      aaCCACTGGGCCCGCAATGCCGGGTTGCGAATCGATCACCTGTTGCTCAATCGCGAGCTTGCGCCTTATCTGAAACGGGCGGGTGTCGATGCATGGGTGCGCAACCAGGCCAAGGCCAGCGACCATGCGCCCGTCTGGATCGAGCTggg                                                                                                                       >  2:248158/1‑149 (MQ=255)                        ccACTGGGCCCGCAATGCCGGGTTGCGAATCGATCACCTGTTGCTCAATCGCGAGCTTGCGCCTTATCTGAAACGGGCGGGTGTCGATGCATGGGTGCGCAACCAGGCCAAGGCCAGCGACCATGCGCCCGt                                                                                                                                      <  8:250556/132‑1 (MQ=255)                        ccACTGGGCCCGCAATGCCGGGTTGCGAATCGATCACCTGTTGCTCAATCGCGAGCTTGCGCCTTATCTGAAACGGGCGGGTGTCGATGCATGGGTGCGCAACCAGGCCAAGGCCAGCGACCATGCGCCCGt                                                                                                                                      >  7:250556/1‑132 (MQ=255)                         cACTGGGCCCGCAATGCCGGGTTGCGAATCGATCACCTGTTGCTCAATCGCGAGCTTGCGCCTTATCTGAAACGGGCGGGTGTCGATGCATGGGTGCGCAACCAGGCCAAGGCCAGCGACCATGCGCCCGTCTGGATCGAGCTGGGTAc                                                                                                                    >  3:234783/1‑149 (MQ=255)                                accGCAAAGCCGGGTAGCGAATCGATCACCTGTAGCTCAATCGCGAGCATGAGCCTTATCTGAAACGTGCGGCTGTCGATGCATGGGAGCGCAACCAGGCCAAGGCAAGCGCCCATCAGCACGTCTCGATCGAGCTGGGTACGcgtcgt                                                                                                             >  2:310869/2‑149 (MQ=255)                                   gCAATGCCGGGTTGCGAATCGATCACCTGTTGCTCAATCGCGAGCTTGCGCCTTATCTGAAACGGGCGGGTGTCGATGCATGGGTGCGCAACCAGGCCAAGGCCAGCGACCATGCGCCCGTCTGGATCGAGCTGGGTACGCGTCGTGC‑t                                                                                                         <  7:75249/149‑1 (MQ=255)                                   gCAATGCCGGGTTGCGAATCGATCACCTGTTGCTCAATCGCGAGCTTGCGCCTTATCTGAAACGGGCGGGTGTCGATGCATGGGTGCGCAACCAGGCCAAGGCCAGCGACCATGCGCCCGTCTGGATCGAGCTGGGTACGCGTCGTGC‑t                                                                                                         >  2:24376/1‑149 (MQ=255)                                     aaTGCCGGGTTGCGAATCGATCACCTGTTGCTCAATCGCGAGCTTGCGCCTTATCTGAAACGGGCGGGTGTCGATGCATGGGTGCGCAACCAGGCCAAGGCCAGCGACCATGCGCCCGTCTGGATCGAGCTGGGTACGCGTCGTGC‑TCg                                                                                                       <  2:23368/149‑1 (MQ=255)                                              ttGCGAATCGATCACCTGTTGCTCAATCGCGAGCTTGCGCCTTATCTGAAACGGGCGGGTGTCGATGCATGGGTGCGCAACCAGGCCAAGGCCAGCGACCATGCGCCCGTCTGGATCGAGCTGGGTACGCGTCGTGC‑TCGGTCATAGTc                                                                                              <  2:173648/149‑1 (MQ=255)                                                       gATCACCTGTTGCTCAATCGCGAGCTTGCGCCTTATCTGAAACGGGCGGGTGTCGATGCATGGGTGCGCAACCAGGCCAAGGCCAGCGACCATGCGCCCGTCTGGATCGAGCTGGGTACGCGTCGTGC‑TCGGTCATAGTCAGTTCAGca                                                                                     >  7:354926/1‑149 (MQ=255)                                                         tCACGTGTTGCTCTATCGCGAGCTTGGGCCTTATCTGAAAGGGGCGGGTGTGCATGCATGTGTGCGCAACGAGGCCTAGGCCAGCGACCATGCGCCCGTCTGGATCGAGCTGGGTACGCGTCGTGC‑TCGGTCATAGTCAGTTCAGcac                                                                                    <  1:310869/148‑1 (MQ=255)                                                                  gCTCAATCGCGAGCTTGCGCCTTATCTGAAACGGGCGGGTGTCGATGCATGGGTGCGCAACCAGGCCAAGGCCAGCGACCATGCGCCCGTCTGGATCGAGCTGGGTACGCGTCGTGC‑TCGGTCATAGTCAGTTCAGCACATGAACGAg                                                                           <  8:100291/148‑1 (MQ=255)                                                                    tCAATCGCGAGCTTGCGCCTTATCTGAAACGTGAGGGTGTCGATGCATGGGTGCGCAACCAGGCCAAGGACATCGACCATGAGCCCGTATGTATCGAGCTGGGTAAGCGTCGTGC‑TCGGTCATAGTCAGTTCAGCACATGAACGAgcgc                                                                        >  1:237948/1‑149 (MQ=255)                                                                    tCAATCGCGAGCTTGCGCCTTATCTGAAACGGGCGGGTGTCGATGCATGGGTGCGCAACCAGGCCAAGGCCAGCGACCATGCGCCCGTCTGGATCGAGCTGGGTACGCGTCGTGC‑TCGGTCATa                                                                                                 >  2:23968/1‑124 (MQ=255)                                                                    tCAATCGCGAGCTTGCGCCTTATCTGAAACGGGCGGGTGTCGATGCATGGGTGCGCAACCAGGCCAAGGCCAGCGACCATGCGCCCGTCTGGATCGAGCTGGGTACGCGTCGTGC‑TCGGTCATAGTCAGTTCAGCACATGAACGAgcgc                                                                        >  1:225316/1‑149 (MQ=255)                                                                    tCAATCGCGAGCTTGCGCCTTATCTCAAACGGGCGGGTGTCGATGCATGGGTGCGCAACCAGGCCAAGGCCAGCGACCATGCGCCCGTCTGGATCGAGCTGGGTACGCGTCGTGC‑TCGGTCATAGTCAGTTCAGCACATGAACGAgcgc                                                                        >  2:255916/1‑149 (MQ=255)                                                                        tCGCGAGCTTGCGCCTTATCTGAAACGGGCGGGTGTCGATGCATGGGTGCGCAACCAGGCCAAGGCCAGCGACCATGCGCCCGTCTGGATCGAGCTGGGTACGCGTCGTGC‑TCGGTCATAGTCAGTTCAGCACATGAACGAGCGCCggg                                                                    >  6:327168/1‑149 (MQ=255)                                                                            gAGCTTGCGCCTTATCTGAAACGGGCGGGTGTCGATGCATGGGTGCGCAACCAGGCCAAGGCCAGCGACCATGCGCCCGTCTGGATCGAGCTGGGTACGCGTCGTGC‑TCGGTCATAGTCAGTTCAGCACATGAACGAGCGCCGGGCt                                                                  >  3:224800/1‑147 (MQ=255)                                                                            gAGCTTGCGCCTTATCTGAAACGGGCGGGTGTCGATGCATGGGTGCGCAACCAGGCCAAGGCCAGCGACCATGCGCCCGTCTGGATCGAGCTGGGTACGCGTCGTGC‑TCGGTCATAGTCAGTTCAGCACATGAACGAGCGCCGGGCTGa                                                                <  2:225316/149‑1 (MQ=255)                                                                              gCTTGCGCCTTATCTGAAACGGGCGGGTGTCGATGCATGGGTGCGCAACCAGGCCAAGGCCAGCGACCATGCGCCCGTCTGGATCGAGCTGGGTACGCGTCGTGC‑TCGGTCATAGTCAGTTCAGCACATGAACGAGCGCCGGGCTGAgg                                                              <  1:248158/149‑1 (MQ=255)                                                                                ttGCGCCTTATCTGAAACGGGCGGGTGTCGATGCATGGGTGCGCAACCAGGCCAAGGCCAGCGACCATGCGCCCGTCTGGATCGAGCTGGGTACGCGTCGTGC‑TCGGTCATAGTCAGTTCAGCACATGAACGAGCGCCGGGCTGAg                                                               >  1:174528/1‑146 (MQ=255)                                                                                ttGCGCCTTATCTGAAACGGGCGGGTGTCGATGCATGGGTGCGCAACCAGGCCAAGGCCAGCGACCATGCGCCCGTCTGGATCGAGCTGGGTACGCGTCGTGC‑TCGGTCATAGTCAGTTCAGCACATGAACGAGCGCCGGGCTGAg                                                               <  2:174528/146‑1 (MQ=255)                                                                                  gcgcCTTATCTGAAACGGGCGGGTGTCGATGCATGGGTGCGCAACCAGGCCAAGGCCAGCGACCATGCGCCCGTCTGGATCGAGCTGGGTACGCGTCGTGC‑TCGGTCATAGTCAGTTCAGCACATGAACGAGCGCCGGGCTGAGgcgc                                                           <  5:327168/148‑1 (MQ=255)                                                                                    gcCTTATCTGAAACGGGCGGGTGTCGATGCATGGGTGCGCAACCAGGCCAAGGCCAGCGACCATGCGCCCGTCTGGATCGAGCTGGGTACGCGTCGTGC‑TCGGTCATAGTCAGTTCAGCACATGAACGAGCGCCGGGCTGAGGCGCTcc                                                        <  4:234783/149‑1 (MQ=255)                                                                                    gcCTTATCTGAAACGGGCGGGTGTCGATGCATGGGTGCGCAACCAGGCCAAGGCCAGCGACCATGCGCCCGTCTGGATCGAGCTGGGTACGCGTCGTGC‑TCGGTCATAGTCAGTTCAGCACATGAACGAGCGCCGGGCTGAGGCGCTcc                                                        >  6:54195/1‑149 (MQ=255)                                                                                         aTCTGAAACGGGCGGGTGTCGATGCATGGGTGCGCAACCAGGCCAAGGCCAGCGACCATGCGCCCGTCTGGATCGAGCTGGGTACGCGTCGTGC‑TCGGTCATAGTCAGTTCAGCACATGAACGAGCGCCGGGCTGAGGCGCTCCGACa                                                    <  8:279414/148‑1 (MQ=255)                                                                                                     cgggTGTCGATGCATGGGTGCGCAACCAGGCCAAGGCCAGCGACCATGCGCCCGTCTGGATCGAGCTGGGTACGCGTCGTGC‑TCGGTCATAGTCAGTTCACCACATGAACGAGCGCCGGGCTGAGGCGCTCCGACAGTAGCCGACTTCa                                       <  1:255916/149‑1 (MQ=255)                                                                                                       ggTGTCGATGCATGGGTGCGCAACCAGGCCAAGGCCAGCGACCATGCGCCCGTCTGGATCGAGCTGGGTACGCGTCGTGC‑TCGGTCATAGTCAGTTCAGCACATGAACGAGCGCCGGGCTGAGGCGCTCCGACAGTAGCCGACTTCAGa                                     <  5:16793/149‑1 (MQ=255)                                                                                                             gATGCATGGGTGCGCAACCAGGCCAAGGCCAGCGACCATGCGCCCGTCTGGATCGAGCTGGGTACGCGTCGTGC‑TCGGTCATAGTCAGTTCAGCACATGAACGAGCGCCGGGCTGGGGCGCTCCGACAGTAGCCGACTTCAGATTGCAt                               >  2:12171/1‑149 (MQ=255)                                                                                                              aTGCATGGGTGCGCAACCAGGCCAAGGCCAGCGAccatgcatcgacacccgcccgtttcagataaggcgcaagctcgcgattgagcaacaggtgatcgattcgcaacccggcattgcgggcccagtggttacgaaaatagtcccagaag                               <  7:310401‑M2/149‑116 (MQ=255)                                                                                                              aTGCATGGGTGCGCAACCAGGCCAAGGCCAGCGACCATGCGCCCGTCTGGATCGAGCTGGGTACGCGTCGTGC‑TCGGTCATAGTCAGTTCAGCACATGAACGAGCGCCGGGCTGAGgc                                                             >  2:376096/1‑118 (MQ=255)                                                                                                              aTGCATGGGTGCGCAACCAGGCCAAGGCCAGCGACCATGCGCCCGTCTGGATCGAGCTGGGTACGCGTCGTGC‑TCGGTCATAGTCAGTTCAGCACATGAACGAGCGCCGGGCTGAGgc                                                             <  1:376096/118‑1 (MQ=255)                                                                                                              aTGCATGGGTGCGCAACCAGGCCAAGGCCAGCGACCATGCGCCCGTCTGGATCGAGCTGGGTACGCGTCGTGC‑TCGGTCATAGTCAGTTCAGCACATGAACGAGCGCCGGGCTGAGGCGCTCCGACAGTAGCCGACTTCAGATTGCAtt                              <  4:224800/149‑1 (MQ=255)                                                                                                              aTGCATGGGTGCGCAACCAGGCCAAGGCCAGCGACCATGCGCCCGTCTGGATCGAGCTGGGTACGCGTCGTGC‑TCGGTCATAGTCAGTTCAGCACATGAACGAGCGCCGGGCTGAGGCGCTCCGACAGTAGCCGACTTCAGATTGCAtt                              >  7:66968/1‑149 (MQ=255)                                                                                                               tGCATGGGTGCGCAACCAGGCCAAGGCCAGCGAccatgcatcgacacccgcccgtttcagataaggcgcaagctcgcgattgagcaacaggtggatcgattcgcaacccggcattgcgggcccagt                                                     >  1:45438‑M2/1‑33 (MQ=255)                                                                                                               tGCATGGGTGCGCAACCAGGCCAAGGCCAGCGAccatgcatcgacacccgcccgtttcagataaggcgcaagctcgcgattgagcaacaggtgatcgattcgcaacccggcattgcgggcccagt                                                      <  2:45438‑M2/125‑93 (MQ=255)                                                                                                                  aTGGGTGCGCAACCAGGCCAAGGCCAGCGACCATGCGCCCGTCTGGATCGAGCTGGGTACGCGTCGTGC‑TCGGTCATAGTCAGTTCAGCACATGAACGAGCGCCGGGCTGAGGCGCTCCGACAGTAGc                                               >  7:242971/1‑128 (MQ=255)                                                                                                                  aTGGGTGCGCAACCAGGCCAAGGCCAGCGACCATGCGCCCGTCTGGATCGAGCTGGGTACGCGTCGTGC‑TCGGTCATAGTCAGTTCAGCACATGAACGAGCGCCGGGCTGAGGCGCTCCGACAGTAGc                                               <  8:242971/128‑1 (MQ=255)                                                                                                                                    caaggccaGCGACCATGCGCCCGTCTGGATCGAGCTGGGTACGCGTCGTGC‑TCGGTCATAGTCAGTTCAGCACAt                                                                                  >  4:292354/1‑75 (MQ=255)                                                                                                                                    caaggccaGCGACCATGCGCCCGTCTGGATCGAGCTGGGTACGCGTCGTGC‑TCGGTCATAGTCAGTTCAGCACAt                                                                                  <  3:292354/75‑1 (MQ=255)                                                                                                                                           aGCGAccatgcatcgacacccgcccgtttcagataaggcgcaagctcgcgattgagcaacaggtgatcgattcgcaacccggcattgcgggcccagtggttacgaaaatagtcccagaaggtgtagacacgctcgtccgggtacagatg  >  8:310401‑M2/1‑5 (MQ=255)                                                                                                                                           aGCGACCATGCGCCCGTCTGGATCGAGCTGGGTACGCGTCGTGCATCGGTCATAGTCAGTTCAGCACATGAACGAGCGCCGGGCTGAGGCGCTCCGACAGTAGCCGACTTCAGATTGCATTCAGATTCGGCCCCGATAATTCCCTCCGt  >  1:267680/1‑149 (MQ=255)                                                                                                                                               |                                                                                                                                                 ACCTTCTGGGACTATTTTCGTAACCACTGGGCCCGCAATGCCGGGTTGCGAATCGATCACCTGTTGCTCAATCGCGAGCTTGCGCCTTATCTGAAACGGGCGGGTGTCGATGCATGGGTGCGCAACCAGGCCAAGGCCAGCGACCATGCGCCCGTCTGGATCGAGCTGGGTACGCGTCGTGC‑TCGGTCATAGTCAGTTCAGCACATGAACGAGCGCCGGGCTGAGGCGCTCCGACAGTAGCCGACTTCAGATTGCATTCAGATTCGGCCCCGATAATTCCCTCCGT  >  NC_002947/3098243‑3098528

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.