New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4099786	59 (0.980)	3 (0.050)	3/258	NT	5.1%	coding (232/1215 nt)	PP_3607	membrane protein
	?	NC_002947	= 4099874	53 (0.900)					coding (144/1215 nt)	PP_3607	membrane protein

CAGCTGACAACGCCGGGAAGAACAGCAGCACCGCCAGGGTCAGCATGACCATCTGCGCACGCAGGC‑‑CCGCGCCACGGC‑‑GC‑TCGTTGATAAACACCCGCCAGGCTGAGGTGAAACCGAAGGCGG‑CGTGGTACAGCGTCAGGCCAAGGGCGGTGCCGACCAGCAGCAACACTACCTGCTTGAAG‑CCGGCATTGAGGTTGAGGAACCAGGCACTGGCCAGCATCAAGGTCAAGGCGATCAATGGCGCGCCGAGGCGACGTGGTTCAGGCGTGGCAGTTGCGGAAAGGCCCA  >  NC_002947/4099729‑4100016                                                                                                                                                        |                                                                                                                                                cAGCTGACAACGCCGGGAAGAACTGGAGCACCGCCAGGGTGAGCATGACCATCTGCGCACGCAGGC‑‑CCGCGCCACGGC‑‑GC‑TGGTTGAAAAACACCCTCCAGGCTGAGGTGTATCGGATGGCGG‑GGTGGTACAGCGTCAGGCCAAGGgcg                                                                                                                                              >  2:327891‑M2/1‑146 (MQ=255) aaGCTTACAACTCCTGGAAGAAAAGCAGCAAAGACAGGGTCAGCATGACCATCTTCGCACTCAGGC‑‑CCGCGACAATGG‑‑GC‑TCGTTGAAAAACACCAGCCAGTCTGAGGTGAAACCGAAGGCGG‑CGTGGTACATCGTCATGCCAAGGGCg                                                                                                                                              <  2:333385/148‑1 (MQ=255)  aGCTGACAACGCCGGGAAGAACAGCAGCACCGCCAGGGTCAGCATGACCATCTGCGCACGCAGGC‑‑CCGCGCCACGGC‑‑GC‑TCGTTGATAAACACCCGCCAGGCTGAGGTGAAACCGAAGGCGG‑CGTGGTACAGCGTCAGGCCAAGGGCgg                                                                                                                                             >  1:1163/1‑149 (MQ=255)        cAACGCCGGGAATAACATCATCACCGGCATGGTCATCATGACCATCTTCGCACGCCGGCCGCCGGGCCACGGCCTTCTTCGTTGATAAACACCCGCCAGGCTGAGGTGAAACCGAAGGCGG‑CGTGGTACAGCGTCAGGCCAAGGGCGGt                                                                                                                                            <  1:307420/149‑1 (MQ=255)        cAACGCCGGGAAGAACAGCAGCACCGCCAGGGTCAGCATGACCATCTGCGCACGCAGGC‑‑CCGCGCCACGGC‑‑GC‑TCGTTGATAAACACCCGCCAGGCTGAGGTGAAACCGAAGGCGG‑CGTGGTACAGCGTCAGGCCAAGGGCGGTGCCGa                                                                                                                                       >  6:356869/1‑149 (MQ=255)         aaCGCCGGGAAGAACAGCAGCACCGCCAGGGTCAGCATGACCATCTGCGCACGCAGGC‑‑CCGCGCCACGGC‑‑GC‑TCGTTGATAAACACCCGCCAGGCTGAGGTGAAACCGAAGGCGG‑CGTGGTACAGCGTCAGGCCAAGGGCGGTGCCGAc                                                                                                                                      >  1:56705/1‑149 (MQ=255)          aCGCCGGGAAGAACAGCAGCACCGCCAGGGTCAGCATGACCATCTGCGCACGCAGGC‑‑CCGCGCCACGGC‑‑GC‑TCGTTGATAAACACCCGCCAGGCTGAGGTGAAACCGAAGGCGG‑CGTGGTACAGCGTCAGGCCAAGGGCGGTGCCGAcc                                                                                                                                     <  3:5552/149‑1 (MQ=255)                  aagaaCAGCAGCACCGCCAGGGTCAGCATGACCATCTGCGCACGCAGGC‑‑CCGCGCCACGGC‑‑GC‑TCGTTGATAAACACCCGCCAGGCTGAGGTGAAACCGAAGGCGG‑CGTGGTACAGCGTCAGGCCAAGGGCGGTGCCGACCAGCAGCaa                                                                                                                             <  1:266707/149‑1 (MQ=255)                  aagaaCAGCAGCACCGCCAGGGTCAGCATGACCATCTGCGCACGCAGGC‑‑CCGCGCCACGGC‑‑GC‑TCGTTGATAAACACCCGCCAGGCTGAGGTGAAACCGAAGGCGG‑CGTGGTACAGCGTCAGGCCAAGGGCGGTGCCGACCAGCAGCaa                                                                                                                             <  5:91572/149‑1 (MQ=255)                   agaaCAGCAGCACCGCCAGGGTCAGCATGACCATCTGCGCACGCAGTC‑‑CCGCGCCACGGC‑‑GC‑TCGTTGATAAACACCCGCCAGGCTGAGGTGAAACCGAAGGCGG‑CGTGGTACAGCGTCAGGCCAAGGGCGGTGCCGACCAGCAGCAac                                                                                                                            <  5:214980/149‑1 (MQ=255)                      aCAGCAGCACCGCCAGGGTCAGCATGACCATCTGCGCACGCAGGC‑‑CCGCGCCACGGC‑‑GC‑TCGTTGATAAACACCCGCCAGGCTGAGGTGAAACCGAAGGCGG‑CGTGGTACAGCGTCAGGCCAAGGGCGGTGCCGACCAGCAGCAacac                                                                                                                          >  1:205013/1‑148 (MQ=255)                       cagcagCACCGCCAGGGTCAGCATGACCATCTGCGCACGCAGGC‑‑CCGCGCCACGGC‑‑GC‑TCGTTGATAAACACCCGCCAGGCTGAGGTGAAACCGAAGGCGG‑CGTGGTACAGCGTCAGGCCAAGGGCGGTGCCGACCAGCAGCAACACt                                                                                                                         >  6:308425/1‑148 (MQ=255)                       cagcagCACCGCCAGGGTCAGCATGACCATCTGCGCACGCAGGC‑‑CCGCGCCACGGC‑‑GC‑TCGTTGATAAACACCCGCCAGGCTGAGGTGAAACCGAAGGCGG‑CGTGGTACAGCGTCAGGCCAAGGGCGGTGCCGACCAGCAGCAACACt                                                                                                                         <  5:308425/148‑1 (MQ=255)                        agcagcACCGCCAGGGTCAGCATGACCATCTGCGCACGCAGGC‑‑CCGCGCCACGGC‑‑GC‑TCGTTGATAAACACCCGCCAGGCTGAGGTGAAACCGAAGGCGG‑CGTGGTACAGCGTCAGGCCAAGGGCGGTGCCGACcagcag                                                                                                                                >  6:246873/1‑140 (MQ=255)                        agcagcACCGCCAGGGTCAGCATGACCATCTGCGCACGCAGGC‑‑CCGCGCCACGGC‑‑GC‑TCGTTGATAAACACCCGCCAGGCTGAGGTGAAACCGAAGGCGG‑CGTGGTACAGCGTCAGGCCAAGGGCGGTGCCGACcagcag                                                                                                                                <  5:246873/140‑1 (MQ=255)                          cagcaCCGCCAGGGTCAGCATGACCATCTGCGCACGCAGGC‑‑CCGCGCCACGGC‑‑GC‑TCGTTGATAAACACCCGCCAGGCTGAGGTGAAACCGAAGGCGGCCGTGGTACAGCGTCAGGCCAAGGGCGGTGCCGACCAGCAGCAACACTAcc                                                                                                                      <  1:283073/149‑1 (MQ=255)                          cagcaCCGCCAGGGTCAGCATGACCATCTGCGCACGCAGGC‑‑CCGCGCCACGGC‑‑GC‑TCGTTGATAAACACCCGCCAGGCTGAGGTGAAACCGAAGGCGG‑CGTGGTACAGCGTCAGGCCAAGGGCGGTGCCGACCAGCAGCAACACTACCt                                                                                                                     >  8:21344/1‑149 (MQ=255)                            gcaCCGCCAGGGTCAGCATGACCATCTGCGCACGCAGGC‑‑CCGCGCCACGGC‑‑GC‑TCGTTGATAAACACCCGCCAGGCTGAGGTGAAACCGAAGGCGG‑CGTGGTACAGCGTCAGGCCAAGGGCGGTGCAGACCAGCAGCAACACTACATGc                                                                                                                   >  7:179917/1‑149 (MQ=255)                              aCCGCCAGGGTCAGCATGACCATCTGCGCACGCAGGC‑‑CCGCGCCACGGC‑‑GC‑TCGTTGATAAACACCCGCCAGGCTGAGGTGAAACCGAAGGCGG‑CGTGGTACAGCGTCAGGCCAAGGGCGGTGCCGACCAGCAGCAACACTACCTGCtt                                                                                                                 >  7:177570/1‑149 (MQ=255)                                  ccAGGGTCAGCATGACCATCTGCGCACGCAGGC‑‑CCGCGCCACGGC‑‑GC‑TCGTTGATAAACACCCGCCAGGCTGAGGTGAAACCGAAGGCGG‑CGTGGTACAGCGTCAGGCCAAGGGCGGTGCCGACCAGCAGCAACACTACCTGCTTGAAg                                                                                                             >  2:205072/1‑149 (MQ=255)                                   cAGGGTCAGCATGACCATCTGCGCACGCAGGC‑‑CCGCGCCACGGC‑‑GC‑TCGTTGATAAACACCCGCCAGGCTGAGGTGAAACCGAAGGCGG‑CGTGGTACAGCGTCAGGCCAAGGGCGGTGCCGACcagca                                                                                                                                 >  5:211133/1‑128 (MQ=255)                                   cAGGGTCAGCATGACCATCTGCGCACGCAGGC‑‑CCGCGCCACGGC‑‑GC‑TCGTTGATAAACACCCGCCAGGCTGAGGTGAAACCGAAGGCGG‑CGTGGTACAGCGTCAGGCCAAGGGCGGTGCCGACcagca                                                                                                                                 <  6:211133/128‑1 (MQ=255)                                       gTCAGCATGACCATCTGCGCACGCAGGC‑‑CCGCGCCACGGC‑‑GC‑TCGTTGATAAACACCCGCCAGGCTGAGGTGAAACAGAAGGCGG‑CGTGGTACAGCGTCAGGCCAAGGGCGTTGCCGACAAGCAGCAACACTACCTGCTTGAAG‑CAgg                                                                                                        >  2:264120/1‑148 (MQ=255)                                                aCCATCTGCGCACGCAGGC‑‑CCGCGCCACGGC‑‑GC‑TCGTTGATAAACACCCGCCAGGCTGAGGTGAAACCGAAGGCGG‑CGTGGTACAGCGTCAGGCCAAGGGCGGTGCCGACCAGCAGCAACACTACCTGCTTGAAG‑CCGGCAttgaggtt                                                                                              <  8:142687/149‑1 (MQ=255)                                                  cATCTGCGCACGCAGGC‑‑CCGCGCCACGGC‑‑GC‑TCGTTGATAAACACCCGCCAGGCTGAGGTGAAACCGAAGGCGG‑CGTGGTACAGCGTCAGGCCAAGGGCGGTGCCGACCAGCAGCAACACTACCTGCTTGAAG‑CCGGCAttgaggttga                                                                                            <  2:205013/149‑1 (MQ=255)                                                  cATCTGCGCACGCAGGC‑‑CCGCGCCACGGC‑‑GC‑TCGTTGATAAACACCCGCCAGGCTGAGGTGAAACCGAAGGCGG‑CGTGGTACAGCGTCAGGCCAAGGGCGGTGCCGACCAGCAGCAACACTACCTGCTTGAAG‑CCGGCAttgaggttga                                                                                            <  4:369922/149‑1 (MQ=255)                                                  cATCTGCGCACGCAGGC‑‑CCGCGCCACGGC‑‑GC‑TCGTTGATAAACACCCGCCAGGCTGAGGTGAAACCGAAGGCGG‑CGTGGTACAGCGTCAGGCCAAGGGCGGTGCCGACCAGCAGCAACACTACCTGCTTGAAG‑CCGGCAttgaggttga                                                                                            <  1:205072/149‑1 (MQ=255)                                                   aTCTGCGCACGCAGGC‑‑CCGCGCCACGGC‑‑GC‑TCGTTGATAAACACCCGCCAGGCTGAGGTGAAACCGAAGGCGG‑CGTGGTACAGCGTCAGGCCAAGGGCGGTGCCGACCAGCAGCAACACTACCTGCTTGAAG‑CCGGCAttgaggttgag                                                                                           <  1:111858/149‑1 (MQ=255)                                                    tCTGCGCACGCAGGC‑‑CCGCGCCACGGC‑‑GC‑TCGTTGATAAACACCCGCCAGGCTGAGGTGAAACCGAAGGCGG‑CGTGGTACAGCGTCAGGCCAAGGgcgcagatggtcatgctgaccctggcggtgctgctgttcttcccggcgttgt                                                                                             <  2:234910‑M2/147‑53 (MQ=255)                                                        cgcacgcaGGC‑‑CCGCGCCACGGC‑‑GC‑TCGTTGATAAACACCCGCCAGGCTGAGGTGAAACCGAAGGCGG‑CGTGGTACAGCGTCAGGCCAAGGGCGGTGCCGACCAGCAGCAACACTACCTGCTTGAAG‑CCGGCATTGAGGTTGAGGAAc                                                                                       <  2:1163/148‑1 (MQ=255)                                                          cacgcaGGC‑‑CCGCGCCACGGC‑‑GC‑TCGTTGATAAACACCCGCCAGGCTGAGGTGAAACCGAAGGCGG‑CGTGGTACAGCGTCAGGCCAAGGGCGGTGCCGACCAGCAGCAACACTACCTGCTTGAAG‑CCGGCATTGAGGTTGAGGAACCAg                                                                                    <  7:21344/149‑1 (MQ=255)                                                                ggC‑‑CCGCGCCACGGC‑‑GC‑TCGTTGATAAACACCCGCCAGGCTGAGGTGAAACCGAAGGCGG‑CGTGGTACAGCGTCAGGCCAAGGGCGGTGCCGACCAGCAGCAACACTACCTGCTTGAAG‑CCGGCATTGAGGTTGAGGAACCAGGCACTg                                                                              <  4:164516/149‑1 (MQ=255)                                                                 gC‑‑CCGCGCCACGGC‑‑GC‑TCGTTGATAAACACCCGCCAGGCTGAGGTGAAACCGAAGGCGG‑CGTGGTACAGCGTCAGGCCAAGGGCGGTGCCGACCAGCAGCAACACTACCTGCTTGAAG‑CCGGCATTGAGGTTGAGGAACCAGGCACTgg                                                                             >  4:289624/1‑149 (MQ=255)                                                                     ccGCGCCACGGC‑‑GC‑TCGTTGATAAACACCCGCCAGGCTGAGGTGAAACCGAAGGCGG‑CGTGGTACAGCGTCAGGCCAAGGgcgcagatggtcatgctgaccctggcggtgcttctgttcttcccggcgttgtcagctggcagcctgttc                                                                            <  4:17042‑M2/149‑70 (MQ=255)                                                                           cACGGC‑‑GC‑TCGTTGATAAACACCCGCCAGGCTGAGGTGAAACCGAAGGCGG‑CGTGGTACAGCGTCAGGCCAAGGGCGGTGCCGACCAGCAGCAACACTACCTGCTTGAAG‑CCGGCATTGAGGTTGAGGAACCAGGCATTGGCCAGCAt                                                                      >  6:284105/1‑148 (MQ=255)                                                                              ggC‑‑GC‑TCGTTGATAAACACCCGCCAGGCTGAGGTGAAACCGAAGGCGG‑CGTGGTACAGCGTCAGGCCAAGGGCGGTGCCGACCAGCAGCAACACTACCTGCTTGAAG‑CCGGCATTGAGGTTGAGGAACCAGGCACTGGCCAGCAtcaag                                                                  <  2:334778/149‑1 (MQ=255)                                                                              ggC‑‑GC‑TCGTTGATAAACACCCGCCAGGCTGAGGTGAAACCGAAGGCGG‑CGTGGTACAGCGTCAGGCCAAGGGCGGTGCCGACCAGCAGCAACACTACCTGCTTGAAG‑CCGGCATTGAGGTTGAGGAACCAGGCACTGGCCAGCAtcaag                                                                  >  7:203633/1‑149 (MQ=255)                                                                                 ggagatCGTTGATAAAATCCCGCCTGGCTGATTTGAAACCGAAGGCGG‑CGTGGTACAGAGTCAGTCCAAGGGCGGTGCCGACCAGCAGAAACACTACCTGCTTGAAG‑CCGGCATTTAGGTTGAGGAACCAGGCACTGTCCAGCAtcaag                                                                  <  8:179917/144‑1 (MQ=255)                                                                                       cGTTGATAAACACCCGCCAGGCTGAGGTGAAACCGAAGGCGG‑CGTGGTACAGCGTCAGGCCAAGGGCGGTGCCGACCAGCAGCAACACTACCTGCTTGAAG‑CCGGCATTGAGGTTGAGGAACCAGGCACTGGCCAGCAtcaaggtcaag                                                            >  1:251928/1‑149 (MQ=255)                                                                                        gTTGATAAACACCCGCCAGGCTGAGGTGAAACCGAAGGCGG‑CGTGGTACAGCGTCAGGCCAAGGGCGGTGCCGACCAGCAGCAACACTACCTGCTTGAAG‑CCGGCATTGAGGTTGAGGAACCAGGCACTGGCCAGCAtcaaggtcaag                                                            <  8:177570/148‑1 (MQ=255)                                                                                              aaaCACCCGCCAGGCTGAGGTGAAACCGAAGGCGG‑CGTGGTACAGCGTCAGGCCAAGGGCGGTGCCGACCAGCAGCAACACTACCTGCTTGAAG‑CCGGCATTGAGGTTGAGGAACCAGGCACTGGCCAGCATCAAGGTCAAGGCGATc                                                      >  3:53765/1‑148 (MQ=255)                                                                                                   cccGCCAGGCTGAGGTGAAACCGAAGGCGG‑CGTGGTACAGCGTCAGGCCAAGGGCGGTGCCGACCAGCAGCAACACTACCTGCTTGAAG‑CCGGCATTGAGGTTGAGGAACCAGGCACTGGCCAGCATCAAGGTCAAGGCGATCAATGgc                                                <  5:344705/149‑1 (MQ=255)                                                                                                    ccGCCAGGCTGAGGTGAAACCGAAGGCGG‑CGTGGTACAGCGTCAGGCCAAGGGCGGTGCCGACCAGCAGCAACACTACCTGCTTGAAG‑CCGGCAttgaggtt                                                                                              <  4:67568/102‑1 (MQ=255)                                                                                                    ccGCCAGGCTGAGGTGAAACCGAAGGCGG‑CGTGGTACAGCGTCAGGCCAAGGGCGGTGCCGACCAGCAGCAACACTACCTGCTTGAAG‑CCGGCATTGAGGTTGAGGAACCAGGCACTCCCCAGCATCAAGGTCAAGGCGATCAATGccg                                               >  6:252929/1‑149 (MQ=255)                                                                                                       ccAGGCTGAGGTGAAACCGAAGGCGG‑CGTGGTACAGCGTCAGGCCAAGGGCGGTGCCGACCAGCAGCAACACTACCTGCTTGAAG‑CCGGCATTGAGGTTGAGGAACCAGGCTCTGGCCAGCATCAAGGTCAAGGCGATCTATGgcgcgc                                            >  8:45205/1‑149 (MQ=255)                                                                                                              gAGGTGAAACCGAAGGCGG‑CGTGGTACAGCGTCAGGCCAAGGGCGGTGCCGACCAGCAGCAACACTACCTGCTTGAAG‑CCGGCATTGAGGTTGAGGAACCAGGCACTGGCCAGCATCAAGGTCAAGGCGAGCAATGGCGCGCGGAGGCg                                     >  6:377691/1‑149 (MQ=255)                                                                                                               aGGTGAAACCGAAGGCGG‑CGTGGTACAGCGTCAGGCCAAGGgcgcagatggtcatgctgaccctggcggtgctgctgttcttcccggcgttgtcagctggcagcctgttcggtaacccggtcactggtctggttgcccctgcgggtgt                                      >  1:234910‑M2/1‑41 (MQ=255)                                                                                                               aGGTGAAACCGAAGGCGG‑CGTGGTACAGCGTCAGGCCAAGGGCGGTGCCGACCAGCAGCAACACTACCTGCTTGAAG‑CCGGCATTGAGGTTGAGGAACCAGGCACTGGCCAGCATCAAGGTCAAGGCGATCAATGGCGCGCCGAGGCg                                     <  8:203633/148‑1 (MQ=255)                                                                                                                 gttaatccGAAGGCGG‑CGTGGTACAGCGTCAGGCCAAGGGCGGTGCCGACCAGCAGCAACACTACCTGCTTGAAG‑CCGGCATTGAGGTTGAGGAACCAGGCACTGGCCAGCATCAAGGTCAAGGCGATCAATGGCGCGCCGAGGCGACg                                  <  5:252929/143‑1 (MQ=255)                                                                                                                  tGAAACCGAAGGCGG‑CGTGGTACAGCGTCAGGCCAAGGGCGGTGCCGACCAGCAGCAACACTACCTGCTTGAAG‑CCGGCATTGAGGTTGAGGAACCAGGCACTGGCCAGCATCAAGGTCAAGGCGATCAATGGCGCGCCGAGGCGACGt                                 >  1:344140/1‑149 (MQ=255)                                                                                                                   gAAACCGAAGGCGG‑CGTGGTACAGCGTCAGGCCAAGGGCGGTGCCGACCAGCAGCAACACTACCTGCTTGAAG‑CCGGCATTGAGGTTGAGGAACCAGGCACTGGCCAGCATCAAGGTCAAGGCGATCAATGGCGCGCCGAGGCGACGTg                                >  5:5872/1‑149 (MQ=255)                                                                                                                    aaaCCGAAGGCGG‑CGTGGTACAGCGTCAGGCCAAGGGCGGTGCCGACCAGCAGCAACACTACCTGCTTGAAG‑CCGGCATTGAGGTTGAGGAACCAGGCACTGGCCAGCATCAAGGTCAAGGCGATCAATGGCGCGCCGAGGCGACGTg                                <  6:5872/148‑1 (MQ=255)                                                                                                                        cGAAGGCGG‑CGTGGTACAGCGTCAGGCCAAGGGCGGTGCCGACCAGCCGCAACACTACCTGCTTGAAG‑CCGGCATTGAGGTTGAGGAACCAGGCACTGGCCAGCATCAAGGTCAAGGCGATCAATGGCGCGCCGAGGCGACGTGGtt                             >  7:194399/1‑147 (MQ=255)                                                                                                                           aGGCGG‑CGTGGTACAGCGTCAGGCCAAGGGCGGTGCCGACCAGCAGCAACACTACCTGCTTGAAG‑CCGGCATTGAGGTTGAGGAACCAGGCACTGGCCAGCATCAAGGTCAAGGCGATCAATGGCGCGCCGAGGCGACGTGGTTCAGGc                        <  4:53765/149‑1 (MQ=255)                                                                                                                             gcgg‑cgTGGTACAGCGTCAGGCCAAGGGCGGTGCCGACCAGCAGCAACACTACCTGCTTGAAG‑CCGGCATTGAGGTTGAGGAACCAGGCACTGGCCAGCATCAAGGTCAAGGCGATCAATGGCGCGCCGAGGCGACGTGGTTCAGGCGt                      >  8:199657/1‑149 (MQ=255)                                                                                                                                g‑cgTGGTACAGCGTCAGGCCAAGGGCGGTGCCGACCAGCAGCAACACTACCTGCTTGAAG‑CCGGCATTGAGGTTGAGGAACCAGGCACTGGCCAGCATCAAGGTCAAGGCGATCAATGGCGCGCCGAGGCGACGTGGTTCAGGCGTGGc                   <  5:356869/149‑1 (MQ=255)                                                                                                                                             gTCAGGCCAAGGGCGGTGCCGACCAGCAGCAACACTACCTGCTTGAAG‑CCGGCATTGAGGTTGAGGAACCAGGCACTGGCCAGCATCAAGGTCAAGGCGATCAATGGCGCGCCGAGGCGACGTGGTTCAGGCGTGGCAGTTGCGGAAAg       >  6:109055/1‑149 (MQ=255)                                                                                                                                                  gCCAAGGGCGGTGCCGACCAGCAGCAACACTACCTGCTTGAAGCCCGGCATTGAGGTTGAGGAACCAGGCACTGGCCAGc                                                                        <  1:253036/80‑1 (MQ=255)                                                                                                                                                  gCCAAGGGCGGTGCCGACCAGCAGCAACACTACCTGCTTGAAG‑CCGGCATTGAGGTTGAGGAACCAGGCACTGGCCAGc                                                                        >  2:253036/1‑79 (MQ=255)                                                                                                                                                  gCCAAGGGCGGTGCCGACCAGCAGCAACACTACCTGCTTGAAG‑CCGGCATTGAGGTTGAGGAACCAGGCACTGGCCAGCATCAAGGTCAAGGCGATCAATGGCGCGCCGAGGCGACGTGGTTCAGGCGTGGCAGTTGCGGAAAGGCCCa  <  2:56705/149‑1 (MQ=255)                                                                                                                                                        |                                                                                                                                                CAGCTGACAACGCCGGGAAGAACAGCAGCACCGCCAGGGTCAGCATGACCATCTGCGCACGCAGGC‑‑CCGCGCCACGGC‑‑GC‑TCGTTGATAAACACCCGCCAGGCTGAGGTGAAACCGAAGGCGG‑CGTGGTACAGCGTCAGGCCAAGGGCGGTGCCGACCAGCAGCAACACTACCTGCTTGAAG‑CCGGCATTGAGGTTGAGGAACCAGGCACTGGCCAGCATCAAGGTCAAGGCGATCAATGGCGCGCCGAGGCGACGTGGTTCAGGCGTGGCAGTTGCGGAAAGGCCCA  >  NC_002947/4099729‑4100016

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.