New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 4281528 =52 (0.860)3 (0.050) 3/250 NT 5.9% intergenic (‑105/+613) PP_3751/PP_3753 cyanate transporter/AraC family transcriptional regulator
?NC_002947 4281574 = 46 (0.810)intergenic (‑151/+567) PP_3751/PP_3753 cyanate transporter/AraC family transcriptional regulator

AGTCGGTTCTCTTGTAACAGGAACTGGCCATTATCCCGGCTCGGCTGGCCTGGCAGAAATGAAGAGATTGGATGCAGGTCAGTGGCCACCTGAATGGACGATTGGCCTCCCGCTTATGCGCAAAATTGGCTATCGGGGTGGCCAATAAGCGGCGCTACAGTAGCGCCATATCCACCCCACACGCTTGGAGACTGACATGCACAACCGTATCGAATGGGCCAAACACGCGCCGTAAGCCTATCAAGCCATGGTCGGCCTGGAGCAGGCGCTGGCCAACAGCGGCCTTGAACAC  >  NC_002947/4281428‑4281719
                                                                                                                                                  |                                                                                                                                                 
aGTCGGTTCTCTTGTAACAGGAACTGGCCATTATCCCGGCTCGGCTGGCCTGGCAGAAATGAAGAGATTGGATGCAGGTCAGTGGCCACCTGAATGGACGATTGGCCTCCCGCTTATGCGCAAAATTGGCTATCGGGGTGGCCAATAAg                                                                                                                                                 <  7:16999/149‑1 (MQ=255)
 gTCGGTTCTCTTGTAACAGGAACTGGCCATTATCCCGGCTCGGCTGGCCTGGCAGAAATGAAGAGATTGGATGCAGGTCAGTGGCCACCTGAATGGACGATTGGCCTCCCGCTTATGCGCAAAATTGGCTATCGGGGTGGCCAATAAgc                                                                                                                                                <  7:110691/149‑1 (MQ=255)
   tgattggctgacggcgcgtgtgtgggcctttcgagacggttgtgcatgtctgtctcctagcgtggggggtggttatggcgctactgtagcgccgcttATTGGCCTCCCGCTTATGCGCAAAATTGGCTAGCGGGGTGGCCAATAAgcg                                                                                                                                               >  4:336816‑M1/98‑148 (MQ=255)
     gTTCTCTTGTAACAGGAACTGGCCATTATCCCGGCTCGGCTGGCCTGGCAGAAATGAAGAGATTGGATGCAGGTCAGTGGCCACCTGAATGGACGATTGGCCTCCCGCTTATGCGCAAAATTGGCTATCGGGGTGGCCAATAAgcggcg                                                                                                                                            <  6:9750/149‑1 (MQ=255)
              tAACAGGAACTGGCCATTATCCCGGCTCGGCTGGCCTGGCAGAAATGAAGAGATTGGATGCAGGTCAGTGGCCACCTGAATGGACGATTGGCCTCCCGCTTATGCGCAAAATTGGCTATCGGGGTGGCCAATAAGCGGCGCTACAGTAg                                                                                                                                   >  8:311622/1‑149 (MQ=255)
                    gAACTGGCCATTATCCCGGCTCGGCTGGCCTGGCAGAAATGAAGAGATTGGATGCAGGTCAGTGGCCACCTGAATGGACGATTGGCCTCCCGCTTATGCGCAAAATTGGCTATCGGGGTGGCCAATAAGCGGCGCTACAGTAGCGccgc                                                                                                                             >  5:185334/1‑147 (MQ=255)
                        tGGCCATTATCCCGGCTCGGCTGGCCTGGCAGAAATGAAGAGATTGGATGCAGGTCAGTGGCCACCTGAATGGACGATTGGCCTCCCCCTTATGCGCAAAATTGGCTATCGGGGTGGCCAATAAGCGGCGCTACAGTAGCGCCATATc                                                                                                                          >  1:129231/1‑148 (MQ=255)
                          gCCATTATCCCGGCTCGGCTGGCCTGGCAGAAATGAAGAGATTGGATGCAGGTCAGTGGCCACCTGAATGGACGATTGGCCTCCCGCTTATGCGCAAAATTGGCTATCGGGGTGGCCAATAAGCGGCGCTACAGTAGCGCCTTATCCAc                                                                                                                       >  3:95091/1‑149 (MQ=255)
                            cATTATCCCGGCTCGGCTGGCCTGGCAGAAATGAAGAGATTGGATGCAGGTCAGTGGCCACCTGAATGGACGATTGGCCTCCCGCTTATGCGCAAAATTGGCTATCGGGGTGGCCAATAAGCGGCGCTACAGTAGCGCCATATCCAccc                                                                                                                     <  2:325441/149‑1 (MQ=255)
                                 tCCCGGCTCGGCTGGCCTGGCAGAAATGAAGAGATTGGATGCAGGTCAGTGGCCACCTGAATGGACGATTGGCCTCCCGCTTATGCGCAAAATTGGCTATCGGGGTGGCCAATAAGCGGCGCTACAGTAGCGCCATATCCACCCcaca                                                                                                                 <  7:214064/148‑1 (MQ=255)
                                 tCCCGGCTCGGCTGGCCTGGCAGAAATGAAGAGATTGGATGCAGGTCAGTGGCCACCTGAATGGACGATTGGCCTCCCGCTTATGCGCAAAATTGGCTATCGGGGTGGCCAATAAGCGGCGCTACAGTAGCGCAATATCCAACCCccac                                                                                                                >  6:15945/1‑149 (MQ=255)
                                     ggctcggctGGCCTGGCATAAATGAAGAGATTGGATGCAGGTCATTGGCCACCTGAATGGACGATTGGCCTCCCGCTTATGCGCAAAATTGGCTATCGGGGTGGCCAATAAGCGGCGCTACAGTAGCGCCATATCCACCCCACACGCtt                                                                                                            <  5:15945/149‑1 (MQ=255)
                                      gctcggctGGCCTGGCATAAATGAAGAGATTGGATGCAGGTCAGTGGCCACCTGAATGGACGATTGGCCTCCCGCTTATGCGCAAAATTGGCTATCGGGGTGGCCAATAAGCGGCGCTACAGTAGCGCCATATCCACCCCACACGCTTg                                                                                                           <  7:351792/149‑1 (MQ=255)
                                       ctcggctGGCCTGGCAGAAATGAAGAGATTGGATGCAGGTCAGTGGCCACCTGAATGGACGATTGGCCTCCCGCTTATGCGCAAAATTGGCTATCGGGGTGGCCAATAAGCGGCGCTACAGTAGCGCCATATCCACCCCACACGCTTgg                                                                                                          <  1:325601/149‑1 (MQ=255)
                                          ggctGGCCTGGCAGAAATGAAGAGATTGGATGCAGGTCAGTGGCCACCTGAATGGACGATTGGCCTCCCGCTTATGCGCAAAATTGGCTATCGGGGTGGCCAATAAGCAGCGCTACAGTAGCGCCATATCCACCCCACACGCTTgg                                                                                                          <  8:207103/146‑1 (MQ=255)
                                          ggctGGCCTGGCAGAAATGAAGAGATTGGATGCAGGTCAGTGGCCACCTGAATGGACGATTGGCCTCCCGCTTATGCGCAAAATTGGCTATCGGGGTGGCCAATAAGCAGCGCTACAGTAGCGCCATATCCACCCCACACGCTTgg                                                                                                          >  7:207103/1‑146 (MQ=255)
                                            ctggcctggcAGAAATGAAGAGATTGGATGCAGGTCAGTGGCCACCTGAATGGACGATTGGCCTCCCGCTTATGCGCAAAATTGGCTATCGGGGTGGCCAATAAGCGGCGCTACAGTAGCGCCATATCCACCCCACACGCTTGGAGACt                                                                                                     <  2:321912/149‑1 (MQ=255)
                                              ggcctggcAGAAATGAAGAGATTGGATGCAGGTCAGTGGCCACCTGAATGGACGATTGGCCTCCCGCTTATGCGCAAAATTGGCTATCGGGGTGGCCAATAAGCGGCGCTACAGTAGCGCCATATCCACCCCACACGCTTGGAGACTGa                                                                                                   >  4:28823/1‑149 (MQ=255)
                                               gcctggcAGAAATGAAGAGATTGGATGCAGGTCAGTGGCCACCTGAATGGACGATTGGCCTCCCGCTTATGCGCAAAATTGGCTATCGGGGTGGCCAATAAGCGGCGCTACAGTAGCGCCATATCCACCCCACACGCTTGGAGACTGAc                                                                                                  <  5:154820/149‑1 (MQ=255)
                                                     cAGAAATGAAGAGATTGGATGCAGGTCAGTGTCCACCTGAATGGACGATTGGCCTCCCGCTTATGCGCAAAATTGGCTATCGGGGTGGCCAATAAGCGGCGCTACAGTAGCGCCATATCCACCCCACACGCTTGGAGACTGACATGcac                                                                                            <  6:233745/149‑1 (MQ=255)
                                                         aaTGAAGAGATTGGATGCAGGTCAGTGGCCACCTGAATGGACGATTGGCCTCCCGCTTATGCGCAAAATTGGCTATCGGGGTGGCCAATAAGCGGCGCTACAGTAGCGCCATATCCACCCCACACGCTTGGAGACTGACATGCACAAcc                                                                                        <  1:94888/149‑1 (MQ=255)
                                                          aTGAATAGATTGGATGCATGTCAGTGGCCACCTGAATTGACGATTGGCCTCCCGCTTATGCTCAAAATTGGCTATCGGGGTGGCCAATAAGCGGCGCTACAg                                                                                                                                      <  8:352182/102‑1 (MQ=255)
                                                          aTGAAGAGATTGGATGCAGGTCAGTGGCCACCTGAATGGACGATTGGCCTCCCGCTTATGCGCAAAATTGGCTATCGGGGTGGCCAATAAGCGGCGCTACAGTAGCGCCATATCCACCCCACACGCTTGGAGACTGACATGCACAACCg                                                                                       >  5:181970/1‑149 (MQ=255)
                                                                   ttGGATGCAGGTCAGTGGCCACCTGAATGGACGATTGGCCTCCCGCTTATGCGCAAAATTGGCTATCGGGGTGGCCAATAAGCGGCGCTACAGTAGCGcc                                                                                                                               >  5:3922/1‑100 (MQ=255)
                                                                   ttGGATGCAGGTCAGTGGCCACCTGAATGGACGATTGGCCTCCCGCTTATGCGCAAAATTGGCTATCGGGGTGGCCAATAAGCGGCGCTACAGTAGCGcc                                                                                                                               <  6:3922/100‑1 (MQ=255)
                                                                   ttGGATGCAGGTCAGTGGCCACCTGAATGGACGATTGGCCTCCCGCTTATGCGCAAAATTGGCTATCGGGGTGGCCAATAAGCGGCGCTACAGTAGCGCCATATCCACCCCACACGCTTGGAGACTGACATGCACAACCGTATCGAATg                                                                              >  1:189473/1‑149 (MQ=255)
                                                                     ggATGCAGGTCAGTGGCCACCTGAATGGACGATTGGCCTCCCGCTTATGCGCAAAATTGGCTATCGGGGTGGCCAATAAGCGGCGCTACAGTAGCGCCATATCCACCCCACACGCTTGGAGACTGACATGCACAACCGTATCGAATgg                                                                             <  2:88837/148‑1 (MQ=255)
                                                                      gATGCAGGTCAGTGGCCACCTGAATGGACGATTGGCCTCCCGCTTATGCGCAAAATTGGCTATCGGGGTGGCCAATAAGCGGCGCTACAGTAGCGCCATATCCACCCCACACGCTTGGAGACTGACATGCACAACCGTATCGAATgga                                                                            <  1:96639/148‑2 (MQ=255)
                                                                      gATGCAGGTCAGTGGCCACCTGAATGGACGATTGGCCTCCCGCTTATGCGCAAAATTGGCTATCGGGGTGGCCAATAAGCGGCGCTACAGTAGCGACATATCCACCCCACACGCTTGGAGACTGACATGAACAAGCGTAGCTAATGGGc                                                                           >  7:121982/1‑149 (MQ=255)
                                                                        tGCAGGTCAGTGGCCACCTGAATGGACGATTGGCCTCCCGCTTATGCGCAAAATTGGCTATCGGGGTGGCCAATAAGCGGCGCTACAGTAGCGCCATATCCACCCCACACGCTTGGAGACTGACATGCACAACCGTATCGAATGGGcc                                                                          >  4:77385/1‑148 (MQ=255)
                                                                          cAGGGCAGTGGCCACCTGAATGGACGATTGGCCTCCCGCTTATGCGCAAAATTGGCTATCGGGGTGGCCAATAAGCGGCGCTACAGTAGCGCCATATCCACCCCACACGCTTGGAGACTGACATGCACAACCGTATCGAATGGGCCaaa                                                                       <  1:186190/149‑1 (MQ=255)
                                                                                aGTGGCCACCTGAATGGACGATTGGCCTCCCGCTTATGCGCAAAATTGGCTATCGGGGTGGCCAATAAGCGGCGCTACAGTAGCGCCATATCCACCCCACACGCTTGGAGACTGACATGCACAACCGTATCGAATGGGCCAAACAcgc                                                                  <  3:77385/148‑1 (MQ=255)
                                                                                 gTGGCCACCTGAATGGACGATTGGCCTCCCGCTTATGCGCAAAATTGGCTATCGGGGTGGCCAATAAGCGGCGCTACAGTAGCGCCATATCCACCCCACACGCTTGGAGACTGACATGCACAACCGTATCGAATGGGCCAAACACgcgc                                                                <  6:181970/149‑1 (MQ=255)
                                                                                  tGGCCACCTGAATGGACGATTGGCCTCCCGCTTATGCGCAAAATTGGCTATCGGGGTGGCCAATAAGCGGCGCTACAGTAGCGCCATATCCACCCCACACGCTTGGAGACTGACATGCACAACCGTATCGAATGGGCCAAACACGCGcc                                                               <  6:192922/149‑1 (MQ=255)
                                                                                    gCCACCTGAATGGACGATTGGCCTCCCGCTTATGCGCAAAATTGGCTATCGGGGTGGCCAATAAGCGGCGCTACAGTAGCGCCATATCCACCCCACACGCTTGGAGACTGACATGCACAACCGTATCGAATGGGCCAAACACGCGCCg                                                              >  6:34614/1‑148 (MQ=255)
                                                                                     ccACCTGAATGGACGATTGGCCTCCCGCTTATGCGCAAAATTGGCTATCGGGGTGGCCAATAAGCGGCGCTACAGTAGCGCCATATCCACCCCACACGCTTGGAGACTGACATGCACAACCGTATCGAATGGGCCAAACACGCGCCGt                                                             >  7:11989/1‑148 (MQ=255)
                                                                                            aaTGGACGATTGGCCTCCCGCTTATGCGCAAAATTGGCTATCGGGGTGGCCAATAAGCGGCGCTACAGTAGCGGCATATCCACCCCACACGCTTGGAGACTGACATGCACAACCGTATCGAATGGGCCAAACACGCGCCGTAAGCCTAt                                                     >  5:71117/1‑149 (MQ=255)
                                                                                               cgcttattggccaccccgctagccaattttgcgcataagcgggaggccaatAAGCGGCGCTACAGTAGCGCCATAACCACCCCCCACGCTAGGAGACAGACATGCACAACCGTCTCGAAAGGCCCACACACGCGCCGTCAGCCAATCa                                                   >  4:336816‑M2/52‑148 (MQ=255)
                                                                                                gACGATTGGCCTCCCGCTTATGCGAAAAATTTGCTATCGGGGTGGCCAATAAGCGGCGCTACAGTAGCGCCATATACACCCAACACGCTTGGAGACTGACATGCACAAACGTATCGAATGGGCAAAACACGCGCAGTAATCCTATCAAg                                                 >  6:293667/1‑149 (MQ=255)
                                                                                                 aCGATTGGCCTCCCGCTTATGCGCAAAATTGGCTATCGGGGTGGCCAATAAGCGGCGCTACAGTAGCGCCATATCCACCCCACACGCTTGGAGACTGACATGCACAACCGTATCGAATGGGCCAAACACGCGCCGTAAGCCTATCAAGc                                                >  3:160948/1‑149 (MQ=255)
                                                                                                   gATTGGCCTCCCGCTTATGCGCAAAATTGGCTATCGGGGTGGCCAATAAGCGGCGCTACAGTAGCGCCATATCCACCCCACACGCTTGGAGCCTGACATGCACAACCGTATCGAATGGGCCAAACACGCGCCGTAAGCCTATCAAGCCa                                              >  4:300054/1‑149 (MQ=255)
                                                                                                     TTGGCCTCCCGCTTATGCGCAAAATTGGCTATCGGGGTGGCCAATAAGCGGCGCTACAGTAGCGCCATATCCACCCCACACGCTTg                                                                                                           <  5:9061‑M1/86‑1 (MQ=255)
                                                                                                     TTGGCCTCCCGCTTATGCGCAAAATTGGCTATCGGGGTGGCCAATAAGCGGCGCTACAGTAGCGCCATATCCACCCCACACGCTTg                                                                                                           >  6:9061‑M1/1‑86 (MQ=255)
                                                                                                     TTGGCCTCCCGCTTATGCGCAAAATTGGCTATCGGGGTGGCCAATAAGCGGCGCTACAGTAGCGCCATATCCACCCCACACGCTTGGAGACTGACATGCACAACCGTATCGAATGGGCCAAACACGCGCCGTAAGCCTATCAAGCCATg                                            <  2:153149‑M1/149‑1 (MQ=255)
                                                                                                     TTGGCCTCCCGCTTATGCGCAAAATTGGCTATCGGGGTGGCCAATAAGCGGCGCTACAGTAGCGCCATATCCACCCCACACGCTTGGAGACTGACATGCACAACCGTATCGAATGGGCCAAACACGCGCCGTAAGCCTATCAAGCCATg                                            >  1:153149‑M1/1‑149 (MQ=255)
                                                                                                      tggccaccccgatagccaattttgcgcataagcgggaggccaatAAGCGGCGCTACAGTAGCGCCATATCCACCCCACACGCTTGGAGACTGACATGCACAACCGTATCGAATg                                                                              >  1:218889‑M2/45‑114 (MQ=255)
                                                                                                      tggccaccccgatagccaattttgcgcataagcgggaggccaatAAGCGGCGCTACAGTAGCGCCATATCCACCCCACACGCTTGGAGACTGACATGCACAACCGTATCGAATg                                                                              <  2:218889‑M2/70‑1 (MQ=255)
                                                                                                        GCCTCCCGCTTTTGCGCAAAATTGGCTATCGGGGTGGCCAATAAGCGGCGCTACAGTAGCGCCATATCCACCCCACACGCTTGGAGACTGACATGCACAACCGTATCGAATGGGCCAAACACGCGCCGTAAGCCTATCAAGCCATGGt                                          >  4:361014‑M1/1‑148 (MQ=255)
                                                                                                         CCTCCCGCTTATGCGCAAAATTGGCTATCGGGGTGGCCAATAAGCGGCGCTACAGTAGCGCCATATCCACCCCACACGCTTGGAGACTGACATGCACAACCGTATCGAATGGGCCAAACACGCGCCGTAAGCCTATCAAGCCATGGTCg                                        >  7:311622‑M1/1‑149 (MQ=255)
                                                                                                          CTCCCGCTTATGCGCAAAATTGGCTATCGGGGTGGCCAATAAGCGGCGCTACAGTAGCGCCATATCCACACCACACGCTTGGAGACTGACATGCACAACCGTATCGAATGGGCCAAACACGCGCCGTAAGCCTATCAAGCCATGGTCgg                                       <  7:178063‑M1/149‑1 (MQ=255)
                                                                                                                cTTATGCGCAAAATTGGCTATCGGGGTGGCCAATAAGCGGCGCTACAGTAGCGCCATATCCACCCCACACGCTTGGAGACTGACATGCACAACCGTATCGAATGGGCCAAACACGCGCCGTAAGCCTATCAAGCCATGGTCGGCCTGGa                                 <  2:129231/149‑1 (MQ=255)
                                                                                                                       gcAAAATTGGCTATCGGGGTGGCCAATAAGCGGCGCTACAGTAGCGCCATATCCACCCCACACGCTTGGAGACTGACATGCACAACCGTATCGAATGGGCCAAACACGCGCCGTAAGCCTATCAAGCCATGGTCGGCCTGGAGCAGgcg                          >  4:97379/1‑149 (MQ=255)
                                                                                                                        cAAAATTGGCTATCGGGGTGGCCAATAAGCGGCGCTACAGTAGCGCCATATCCACCCCACACGCTTGGAGACTGACATGCACAACCGTATCGAATGGGCCAAACACGCGCCGTAAGCCTATCAAGCCATGGTCGGCCTGGAGCAGgcgc                         >  3:130649/1‑149 (MQ=255)
                                                                                                                         aaaaTTGGCTATCGGGGTGGCCAATAAGCGGCGCTACAGTAGCGCCATATCCACCCCACACGCTTGGAGACTGACATGCACAACCGTATCGAATGGGCCAAACACGCGCCGTAAGCCTATCAAGCCATGGTCGGCCTGGAGCAGGCGCt                        <  5:334803/149‑1 (MQ=255)
                                                                                                                         aaaaTTGGCCATCGGGGTGGCCAATAAGCGGCGCTACAGTAGCGCCATATCCACCCCACACGCTTGGAGACTGACATGCACAACCGTATCGAATGGGCCAAACACGCGCCGTAAGCCTATCAAGCCATGGTCGGCCTGGAGCAGGCGCt                        >  2:123865/1‑149 (MQ=255)
                                                                                                                            aTTGGCTATCGGGGTGGCCAATAAGCGGCGCTACAGTAGCGCCATATCCACCCCACACGCTTGGAGACTGACATGCACAACCGTATCGAATGGGCCAAACACGCGCCGTAAGCCTATCAAGCCATGGTCGGCCTGGAGCAGGCGCTGGc                     <  5:34614/149‑1 (MQ=255)
                                                                                                                            aTTGGCTATCGGGGTGGCCAATAAGCGGCGCTACAGTAGCGCCATATCCACCCCACACGCTTGGAGACTGACATGCACAACCGTATCGAATGGGCCAAACACGCGCCGTAAGCCTATCAAGCCATGGTCGGCCTGGAGCAGGCGCTGGc                     <  3:28823/149‑1 (MQ=255)
                                                                                                                                   aTCGGGGTGGCCAATAAGCGGCGCTACAGTAGCGCCATATCCACCCCACACGCTTGGAGACTGACATGCACAACCGTATCGAATGGGCCaaa                                                                       <  4:257483/92‑1 (MQ=255)
                                                                                                                                   aTCGGGGTGGCCAATAAGCGGCGCTACAGTAGCGCCATATCCACCCCACACGCTTGGAGACTGACATGCACAACCGTATCGAATGGGCCaaa                                                                       >  3:257483/1‑92 (MQ=255)
                                                                                                                                      ggggTGGCCAATAAGCGGCGCTACAGTAGCGCCATATCCACCCCACACGCTTGGAGACTGACATGCAGAACCGTATCGAATGGGCCAAAAACGCGCCGTAAGGCGATGAAGCCATGGGCGGCGTGGCGCCGGCTGTGGGCATCAGGGGc           >  8:291124/1‑149 (MQ=255)
                                                                                                                                      ggggTGGCCAATAAGCGGCGCTACAGTAGCGCCATATCCACCCCACACGCTTGGAGACTGACATGCACAACCGTATCGAATGGGCCAAACACGCGCCGTAAGCCTATCAAGCCATGGTCGGCCTGGAGCAGGCGCTGGCCAACAGCgg            <  2:189473/148‑1 (MQ=255)
                                                                                                                                      ggggTGGCCAATAAGCGGCGCTACAGTAGCGCCATATCCACCCCACACGCTTGGAGACTGACATGCACAACCGTATCGAATGGGCCAAACACGCGCCGTAAGCCTATCAAGCCATGGTCGGCCTGGAGCAGGCGCTGGCCAACAGCGGc           <  4:130649/149‑1 (MQ=255)
                                                                                                                                              caatAAGCGGCGCTACAGTAGCGCCATATCCACCCCACACGCTTGGAGACTGACATGCACAACCGTATCGAATGGGCCAAACACGCGCCGTAAGCCTATCAAGCCATGGTCGGCCTGGAGCAGGCGCTGGCCAACAGCGGCCTTGAaca   >  3:131270‑M2/5‑149 (MQ=255)
                                                                                                                                              caatAAGCGGCGCTACAGTAGCGCCATATCCACCCCACACGCTTGGAGACTGACATGCACAACCGTATCGAATGGGCCAAACACGCGCCGTAAGCCTATCAAGCCATGGTCGGCCTGGAGCAGGCGCTGGCCAACAGCGGCCTTGAaca   >  1:341839‑M2/5‑149 (MQ=255)
                                                                                                                                               aatAAGCGGCGCTACAGTAGCGCCATATCCACCCCACACGCTTGGAGACTGACATGCACAACCGTATCGAATGGGCCAAACACGCGCCGTAAGCCTATCAAGCCATGGTCGGCCTGGAGCAGGCGCTGGCCAACAGCGGCCTTGAacac  >  8:48047‑M2/4‑149 (MQ=255)
                                                                                                                                                  |                                                                                                                                                 
AGTCGGTTCTCTTGTAACAGGAACTGGCCATTATCCCGGCTCGGCTGGCCTGGCAGAAATGAAGAGATTGGATGCAGGTCAGTGGCCACCTGAATGGACGATTGGCCTCCCGCTTATGCGCAAAATTGGCTATCGGGGTGGCCAATAAGCGGCGCTACAGTAGCGCCATATCCACCCCACACGCTTGGAGACTGACATGCACAACCGTATCGAATGGGCCAAACACGCGCCGTAAGCCTATCAAGCCATGGTCGGCCTGGAGCAGGCGCTGGCCAACAGCGGCCTTGAACAC  >  NC_002947/4281428‑4281719

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.