New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5140834	53 (0.880)	5 (0.090)	4/252	NT	8.4%	coding (728/894 nt)	PP_4525	LysR family transcriptional regulator
	?	NC_002947	= 5140853	59 (1.030)					coding (709/894 nt)	PP_4525	LysR family transcriptional regulator

GCTTTGTTGCAGGTCGATCCATGCCTGCAGATTAGCCCCGCGCATACCTTGGCGCCACATCAGCCAGGTGACCGCCTGATCGAAAGGTGCCTGC‑‑‑AGCG‑AGTGCACCCTCACCCGATCACGCCCAGGCAGGCTGTCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGCCAGCATGCTCTGGTACGACTCGATCTCCATCACCCGCCCCATTGGCGTATGGGCATGGGCATACCAGGCCTCCAGACGCATGCGGTACGAGCAGCCCTGGCGG  >  NC_002947/5140710‑5140998                                                                                                                                                    |                                                                                                                                                  gCTTTGTTGCAGGTCGATCCATGCCTGCAGATTAGCCCCGCGCATACCTTGGCGCCACATCAGCCAGGTGACCGCCTGATCGAAAGGTGCCTGC‑‑‑AGCG‑AGTGCACCCTCACCCGATCACGCCCAGGCAGGCTGTCGAGCATCGActggg                                                                                                                                              <  8:77848‑M2/149‑6 (MQ=255)          cAGGTCGATCCATGCCTGCAGATTAGCCCCGCGCATACCTTGGCGCCACATCAGCCAGGTGACCGCCTGATCGAAAGGTGCCTGC‑‑‑AGCG‑AGTGCACCCTCACCCGATCACGCCCAGGCAGGCTGTCGAGCATCGACTGGGCCatcatc                                                                                                                                      <  1:375346/148‑1 (MQ=255)            ggTCGATCCATGCCTGCAGATTAGCCCCGCGCATACCTTGGCGCCACATCAGCCAGGTGACCGCCTGATCGAAAGGGGCCTGC‑‑‑AGCG‑AGTGCACCCTCACCCGATCACGCCCAGGCAGGCTGTCGAGCATCGACTGGGCCATCATCGcc                                                                                                                                   <  8:98150/149‑1 (MQ=255)             gTCGATCCATGCCTGCAGATTAGCCCCGCGCATACCTTGGCGCCACATCAGCCAGGTGACCGCCTGATCGAAAGGTGCCTGC‑‑‑AGCG‑AGTGCACCCTCACCCGATCACGCCCAGGCAGGCTGTCGAGCATCGACTGGGCCATCATCGCca                                                                                                                                  >  7:166352/1‑149 (MQ=255)                gATCCATGCCTGCAGATTAGCCCCGCGCATACCTTGGCGCCACATCAGCCAGGTGACCGCCTGATCGAAAGGTGCCTGC‑‑‑AGCG‑AGTGCACCCTCACCCGATCACGCCCAGGCAGGCTGTCGAGCATCGACTGGGCCATCATCGCCacac                                                                                                                               <  7:77848/149‑1 (MQ=255)                     aTGCCTGCAGATTAGCCCCGCGCATACCTTGGCGCCACATCAGCCAGGTGACCGCCTGATCGAAAGGTGCCTGC‑‑‑AGCG‑AGTGCACCCTCACCCGATCACGCCCAGGCAGGCTGTCGAGCATCGACTGGGCCATCATCGCCAcacccgca                                                                                                                          >  3:115919/1‑149 (MQ=255)                             aGATTAGCCCCGCGCATACCTTGGCGCCACATCAGCCAGGTGACCGCCTGATCGAAAGGTGCCTGC‑‑‑AGCG‑AGTGCACCCTCACCCGATCACGCCCAGGCAGGCTGTCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGAt                                                                                                                  <  3:16570/149‑1 (MQ=255)                               aTTAGCCCCGCGCATACCTTGGCGCCACATCAGCCAGGTGACCGCCTGATCGAAAGGTGCCTGC‑‑‑AGCG‑ACTGCACCCTCACCCGATCACGCCCAGGCAGGCTGTCGAGCATCGACTGGGCCATCATCGCCACCCCCGCACCCGAGATca                                                                                                                >  6:356004/1‑149 (MQ=255)                                      ccGCGCATACCTTGGCGCCACATCAGCCAGGTGACCGCCTGATCGAAAGGTGCCTGC‑‑‑AGCG‑AGTGCACCCTCACCCGATCACGCCCAGGCAGGCTGTCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGc                                                                                                         >  8:233632/1‑149 (MQ=255)                                      ccGCGCATACCTTGGCGCCACATCAGCCAGGTGACCGCCTGATCGAAAGGTGCCTGC‑‑‑AGCG‑AGTGCACCCTCACCCGATCACGCCCAGGCAGGCTGTCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGc                                                                                                         >  2:130214/1‑149 (MQ=255)                                         cgcATACCTTGGCGCCACATCAGCCAGGTGACCGCCTGATCGAAAGGTGCCTCCCCAAGCGTAGCGCA‑ACTGACCCGATCACGCCCAGGCAGGCTGTCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGc                                                                                                         <  1:123327/149‑1 (MQ=255)                                                 ttGGCGCCACATCAGCCAGGTGACCGCCTGATCGAAAGGTGCCTGC‑‑‑AGCG‑AGTGCACCCTCACCCGATCACGCCCAGGCAGGCTGTCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGCCAGCATGctct                                                                                              >  4:41476/1‑149 (MQ=255)                                                   ggCGCCACATCAGCCAGGTGACCGCCTGCTCGAAAGGTGCCTGC‑‑‑AGCG‑AGTGCACCCTCACCCGATCACGCCCAGGCAGGCTGTCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGCCAGCATGCTCTg                                                                                             <  6:360269/148‑1 (MQ=255)                                                   ggCGCCACATCAGCCAGGTGACCGCCTGATCGAAAGGTGCCTGC‑‑‑AGCG‑AGTGCACCCTCACCCGATCACGCCCAGGCAGGCTGTCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGCCAGCATGCTCTg                                                                                             <  8:166352/148‑1 (MQ=255)                                                     cgcCACATCAGCCAGGTGACCGCCTGATCGAAAGGTGCCTGC‑‑‑AGCG‑AGTGCACCCTCACCCGATCACGCCCAGGCAGGCTGTCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGCCAGCATGCTCTGGTa                                                                                          <  4:174099/149‑1 (MQ=255)                                                         acaTCAGCCAGGTGACCGCCTGATCGAAAGGTGCCTGC‑‑‑AGCG‑AGTGCACCCTCACCCGATCACGCCCAGGCAGGCTGTCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGCCAGCATGCTCTGGTACGAc                                                                                      >  2:85071/1‑149 (MQ=255)                                                               gCCAGGTGACCGCCTGATCGAAAGGTGCCTGC‑‑‑AGCG‑AGTGCACCCTCACCCGATCACGCCCAGGCAGGCTGTCGAGCATCGACTGGGCCATCATCTCCACACCCGCACCCGCGATCACACAGGCCAGCATGCTCTGGTACGACTCGAtc                                                                                <  3:41476/149‑1 (MQ=255)                                                               gCCAGGTGACCGCCTGATCGAAAGGTGCCTGC‑‑‑AGCG‑AGTGCACCCTCACCCGATCACGCCCAGGCAGGCTGTCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGCCAGCATGCTCTGGTACGACTCGAtc                                                                                <  7:75181/149‑1 (MQ=255)                                                               gCCAGGTGACCGCCTGATCGAAAGGTGCCTGC‑‑‑AGCG‑AGTGCACCCTCACCCGATCACGCCCAGGCAGGCTGTCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGCCAGCATGCTCTGGTACGACTCGAtc                                                                                >  5:39111/1‑149 (MQ=255)                                                                ccAGGTGACCGCCTGATCGAAAGGTGCCTGC‑‑‑AGCG‑AGTGCACCCTCACCCGATCACGCCCAGGCAGGCTGTCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGCCAGCATGCTCTGGTACGACTCGAtct                                                                               >  1:187955/1‑149 (MQ=255)                                                                 cAGGTGACCGCCTGATCGAAAGGTGCCTGC‑‑‑AGCG‑AGTGCACCCTCACCCGATCACGCCCAGGCAGGCTGTCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGCCAGCATGCTCTGGTACGACTCGAtcac                                                                              <  6:355500/149‑3 (MQ=255)                                                                           ccTGATCGAAAGGTGCCTGC‑‑‑AGCG‑AGTGCACCCTCACCCGATCACGCCCAGGCAGGCTGTCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGCCAGCATGCTCTGGTACGACTCGATCTCCATCACCCGc                                                                    >  3:134387/1‑149 (MQ=255)                                                                           ccTGATCGAAAGGTGCCTGC‑‑‑AGCG‑AGTGCACCCTCACCCGATCACGCCCAGGCAGGCTGTCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGCCAGCATGCTCTGGTACGACTCGATCTCCATCACCCGc                                                                    >  6:56546/1‑149 (MQ=255)                                                                           ccTGATCGAAAGGTGCCTGC‑‑‑AGCG‑AGTGCACCCTCACCCGATCACGCCCAGGCAGGCTGTCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGCCAGCATGCTCTGGTACGACTCGATCTCCATCACCCGc                                                                    <  4:115919/149‑1 (MQ=255)                                                                             tGATCGAAAGGTGCCTGC‑‑‑AGCG‑AGTGCACCCTCACCCGATCACGCCCAGGCAGGCTGTCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGCCAGCATGCTCTGGTACGACTCGATCTCCATCACCCGccc                                                                  >  1:81719/1‑149 (MQ=255)                                                                               aTCGAAAGGTGCCTGC‑‑‑AGCG‑AGTGCACCCTCACCCGATCACGCCCAGGCAGGCTGTCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGCCAGCATGCTCTGGTACGACTCGATCTCCATCACCCGcccc                                                                 <  4:134387/148‑1 (MQ=255)                                                                                    aaGGTGCCTGC‑‑‑AGCG‑AGTGCACGCTCACCCGATCACGCCCAGGCAGGCTGTCGAGCATCGACTGGTCCATCATCGCCACACCCGCACCCGCGATCACACAGGCCAGCATGCTCTGGTACGACTCGATCTCCTTCACCCGCCCCATTGGc                                                           <  3:253781/149‑1 (MQ=255)                                                                                          ccTGC‑‑‑AGCG‑AGTGCACCCTCACCCGATCACGCCCAGGCAGGCTGTCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGCCAGCATGCTCTGGTACGACTCGATCTCCATCACCCGCCCCATTGGCGTatg                                                      <  5:114523/148‑1 (MQ=255)                                                                                            tGC‑‑‑AGCG‑AGTGCACCCTCACCCGATCACGCCCAGGCAGGCTGTCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGCCAGCATGCTCTg                                                                                             >  8:314449/1‑107 (MQ=255)                                                                                            tGC‑‑‑AGCG‑AGTGCACCCTCACCCGATCACGCCCAGGCAGGCTGTCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGCCAGCATGCTCTg                                                                                             <  7:314449/107‑1 (MQ=255)                                                                                            tGC‑‑‑AGCG‑AGTGCACCCTCACCCGATCACGCCCAGGCAGGCTGTCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGCCAGCATGCTCTGGTACGACTCGATCTCCATCACCCGCCCCATTGGCGTatggg                                                    >  7:103478/1‑148 (MQ=255)                                                                                             gC‑‑‑AGCG‑AGTGCACCCTCACCCGATCACGCCCAGGCAGGCTGTCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGCCAGCATGCTCTGGTACGACTCGATCTCCATCACCCGCCCCATTGGCGTatgggga                                                  >  5:327847/1‑147 (MQ=255)                                                                                             gC‑‑‑AGCG‑AGTGCACCCTCACCCGATCACGCCCAGGCAGGCTGTCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGCCAGCATGCTCTGGTACGACTCGATCTCCATCACCCGCCCCATTGGCGTatgggca                                                  >  4:273838/1‑149 (MQ=255)                                                                                                  aGCG‑AGTGCACCCTCACCCGATCACGCCCAGGCAGGCTGTCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGCCAGCATGCTCTGGTACGACTCGATCTCCATCACCCGCCCCATTGGCGTatgggcatg                                                >  4:347529/1‑149 (MQ=255)                                                                                                   gCG‑AGTGCACCCTCACCCGATCACGCCCAGGCAGGCTGTCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGCCAGCATGCTCTGGTACGACTCGATCTCCATCACCCGCCCCATTGGCGTatgggcatgg                                               <  8:103478/149‑1 (MQ=255)                                                                                                     g‑AGTGCACCCTCACCCGATCACGCCCAGGCAGGCTGTCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGCCAGCATGCTCTGGTACGACTCGATCTCCATCACCCGCCCCATTGGCGTatgggcatgggc                                             <  1:130214/149‑1 (MQ=255)                                                                                                       aGTGCACCCTCACCCGATCACGCCCAGGCAGGCTGTCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGCCAGCATGCTCTGGTACGACTCGATCTCCATCACCCGCCCCATTGGCGTatgggagaatcg                                             >  7:257526/1‑141 (MQ=255)                                                                                                       aGTGCACCCTCACCCGATCACGCCCAGGCAGGCTGTCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGCCAGCATGCTCTGGTACGACTCGATCTCCATCACCCGCCCCATTGGCGTatgg                                                     <  8:257526/140‑1 (MQ=255)                                                                                                         tGCACCCTCACCCGATCACGCCCAGGCAGGCTGTCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGCCAGCATGCTCTGGTACGACTCGATCTCCATCACCCGCCCCATTGGCGTATGGGCATGGGCATa                                          <  2:187955/149‑1 (MQ=255)                                                                                                           cACCCTCACCCGATCACGCCCAGGCAGGCTGTCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGCCAGCATGCTCTGGTACGACTCGATCTCCATCACCCGCCCCATTGGCGTATGGGCATGGGCATAc                                         <  2:81719/148‑1 (MQ=255)                                                                                                              ccTCACCCGATCACGCCCAGGCAGGCTGTCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATca                                                                                                                >  8:32801/1‑74 (MQ=255)                                                                                                              ccTCACCCGATCACGCCCAGGCAGGCTGTCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATca                                                                                                                <  7:32801/74‑1 (MQ=255)                                                                                                              ccTCACCCGATCACGCCCAGGCAGGCTGTCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGCCAGCATGCTCTGGTACGACTCGATCTCCATCACCCGCCCCATTGGCGTatgg                                                     >  2:319399/1‑133 (MQ=255)                                                                                                              ccTCACCCGATCACGCCCAGGCAGGCTGTCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGCCAGCATGCTCTGGTACGACTCGATCTCCATCACCCGCCCCATTGGCGTATGGGCATGGGCATACCAgg                                     >  6:371702/1‑149 (MQ=255)                                                                                                              ccTCACCCGATCACGCCCAGGCAGGCTGTCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGCCAGCATGCTCTGGTACGACTCGATCTCCATCACCCGCCCCATTGGCGTATGGGCATGGGCATACCAgg                                     <  6:317921/149‑1 (MQ=255)                                                                                                               cTCACCCGATCACGCCCAGGCAGGCTGTCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGCCAGCATGCTCTGGTACGACTCGATCTCCATCACCCGCCCCATTGGCGTATGGGCATGGGCATACCAGGc                                    <  6:39111/149‑1 (MQ=255)                                                                                                                   cccGACCACGCCCAGGCAGGCTGTCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGAGATCACACAGGCCAGCATGCTCTGGTACGACTCGATCTCCATCACCCGCCCGATTGGCGTATGGGCATGGGCATACCAGGCCTcc                                <  4:312690/149‑1 (MQ=255)                                                                                                                    ccGATCACGCCCAGGCAGGCTGTCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGCCAGCATGCTCTGGTACGACTCGATCTCCATCACCCGCCCCATTGGCGTATGGGCATGGGCATACCAGGCCTc                                 >  4:86063/1‑147 (MQ=255)                                                                                                                    ccGATCACGCCCAGGCAGGCTGTCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGCCAGCATGCTCTGGTACGACTCGATCTCCATCACCCGCCCCATTGGCGTATGGGCATGGGCATACCAGGCCTc                                 >  2:376142/1‑147 (MQ=255)                                                                                                                           cGCCCAGGCAGGCTGTCGAGCATCGActgggcgtgatcgggtgagggtgcactcgctgcaggcacctttcgatcaggcggtcacctggctgatgtggcgccaaggtatgcgcagggctaatctgca                                               >  6:4801‑M2/1‑26 (MQ=255)                                                                                                                           cGCCCAGGCAGGCTGTCGAGCATCGActgggcgtgatcgggtgagggtgcactcgctgcaggcacctttcgatcaggcggtcacctggctgatgtggcgccaaggtatgcgcagggctaatctgca                                               <  5:4801‑M2/126‑101 (MQ=255)                                                                                                                           cGCCCAGGCAGGCTGTCGAGCATCGActgggcgtgatcgggtgagggtgcactcgctgcaggcacctttcgatcaggcggtcacctggctgatgtg                                                                             <  1:39397‑M2/96‑71 (MQ=255)                                                                                                                           cGCCCAGGCAGGCTGTCGAGCATCGActgggcgtgatcgggtgagggtgcactcgctgcaggcacctttcgatcaggcggtcacctggctgatgtg                                                                             >  2:39397‑M2/1‑26 (MQ=255)                                                                                                                            gCCCAGGCAGGCTGTCGAGCATCGActgggcgtgatcgggtgagggtgcactcgctgcaggcacctttcgatcaggcggtcacctggctgatgtggcgccaaggtatgcgcggggctaatctgcaggcatggatcgacctgcaacaaag                       <  6:222057‑M2/149‑125 (MQ=255)                                                                                                                            gCCCAGGCAGGCTGTCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGCCAGCATGCTCTGGTACGACTCGATCTCCATCACCCGCCCCATTGGCGTATGGGCATGGGCATACCAGGCCTCCAGACGCATg                       >  7:216180/1‑149 (MQ=255)                                                                                                                             cccAGGCAGGCTGTCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGCCAGCATGCTCTGGTACGACTCGATCTCCATCACCCGCCCCATTGGCGTATGGGCATGGGCATACCAGGCCTCCAGACGCATGc                      >  7:322802/1‑149 (MQ=255)                                                                                                                             cccAGGCAGGCTGTCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGCCAGCATGCTCTGGTACGACTCGATCTCCATCACCCGCCCCATTGGCGTATGGGCATGGGCATACCAGGCCTCCAGACGCATGc                      >  4:98493/1‑149 (MQ=255)                                                                                                                                     ggcTGTCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGCCAGCATGCTCTGGTACGACTCGATCTCCATCACCCGCCCCATTGGCGTATGGGCATGGGCATACCAGGCCTCCAGACGCATGCGGTACGag              <  5:371702/149‑1 (MQ=255)                                                                                                                                          tCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGCCAGCATGCTCTGGTACGACTCGa                                                                                  <  8:205503/76‑1 (MQ=255)                                                                                                                                          tCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGCCAGCATGCTCTGGTACGACTCGa                                                                                  <  8:211045/76‑1 (MQ=255)                                                                                                                                          tCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGCCAGCATGCTCTGGTACGACTCGa                                                                                  >  7:211045/1‑76 (MQ=255)                                                                                                                                          tCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGCCAGCATGCTCTGGTACGACTCGa                                                                                  >  7:205503/1‑76 (MQ=255)                                                                                                                                          tCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGCCAGCATGCTCTGGTACGACTCGATCTCCATCACCCGCCCCATTGGCGTATGGGCATGGGCATACCAGGCCTCCAGACGCATGCGGTACGagcagc          <  3:242275/148‑1 (MQ=255)                                                                                                                                          tCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGCCAGCATGCTCTGGTACGACTCGATCTCCATCACCCGCCCCATTGGCGTATGGGCATGGGCATACCAGGCCTCCAGACGCATGCGGTACGagcag           <  3:273838/147‑1 (MQ=255)                                                                                                                                               cATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGCCAGCATGCTCTGGTACGACTCGATCTCCATCACCCGCCCCATTGGCGTATGGGCATGGGCATACCAGGCCTCCAGACGCATGCGGTACGAGCAGCCCTGGc    >  1:366074/1‑149 (MQ=255)                                                                                                                                                   gACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGCCAGCATGCTCTGGTACGACTCGATCTCCATCACCCGCCCCATTGGCGTATGGGCATGGGCATACCAGGCCTCCAGACGCATGCGGTACGAGCAGCCCTGGCgg  >  7:287930/1‑147 (MQ=255)                                                                                                                                                    |                                                                                                                                                  GCTTTGTTGCAGGTCGATCCATGCCTGCAGATTAGCCCCGCGCATACCTTGGCGCCACATCAGCCAGGTGACCGCCTGATCGAAAGGTGCCTGC‑‑‑AGCG‑AGTGCACCCTCACCCGATCACGCCCAGGCAGGCTGTCGAGCATCGACTGGGCCATCATCGCCACACCCGCACCCGCGATCACACAGGCCAGCATGCTCTGGTACGACTCGATCTCCATCACCCGCCCCATTGGCGTATGGGCATGGGCATACCAGGCCTCCAGACGCATGCGGTACGAGCAGCCCTGGCGG  >  NC_002947/5140710‑5140998

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.