New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 530488791 (1.510)5 (0.090) 4/250 NT 5.3% coding (2365/3483 nt) recC multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit
?NC_002947 = 5304970 91 (1.600)coding (2282/3483 nt) recC multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit

ACCGAGGGCTGAACGGCTGCAGCGGGTGCTCCTGGGTCAGTGCGTGCAACAGTTGCTCGCCCGGTCTCGCGGGCTGGCCCTGCTGCGCGTCGGCCAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGTTGGTCACGTGCTGACAGTAGCGCTTCAAGTAACAGGTAACGGTCGTCTTCGCGGCGTGAGCGGTCGCCGGGGCGATAGTCGCTGGCCATC  >  NC_002947/5304824‑5305113
                                                                                                                                                  |                                                                                                                                               
aCCGAGGGCTGAACGGCTGCAGCGGGTGCTCCTGGGTCAGTGCGTGCAACAGTTGCTCGCCCGGTCTCGCGGGCTGGCCCTGCTGCGCGTCGGCCAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGcc                                                                                                                                               <  3:190858‑M2/149‑3 (MQ=255)
          gAACGGCTGCAGCGGGTGCTCCTGGGTCAGTGCGTGCAACAGTTGCTCGCCCGGTCTCGCGGGCTGGCCCTGCTGCGCGTCGGCCAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGc                                                                                                                                     >  4:145294/1‑149 (MQ=255)
           aaCGGCTGCAGCGGGTGCTCCTGGGTCAGTGCGTGCAACAGTTGCTCGCCCGGTCTCGCGGGCTGGCCCTGCTGCGCGTCGGCCAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGc                                                                                                                                     >  3:207335/1‑148 (MQ=255)
           aaCGGCTGCAGCGGGTGCTCCTGGGTCAGTGCGTGCAACAGTTGCTCGCCCGGTCTCGCGGGCTGGCCCTGCTGCGCCTCGGCCAAATGCCAGCCCGCAGCGATGTGATAGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGc                                                                                                                                     >  4:350446/1‑148 (MQ=255)
            aCGGCTGCAGCGGGTGCTCCTGGGTCAGTGCGTGCAACAGTTGCTCGCCCGGTCTCGCGGGCTGGCCCTGCTGCGCGTCGGCCAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTa                                                                                                                                   <  3:248291/149‑1 (MQ=255)
              ggCTGCAGCGGGTGCTCCTGGGTCAGTGCGTGCAACAGTTGCTCGCCCGGTCTCGCGGGCTGGCCCTGCTGCGCGTCGGCCAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTAtt                                                                                                                                 <  7:339739/149‑1 (MQ=255)
                   cAGCGGGTGCTCCTGGGTCAGTGCGTGCAACAGTTGCTCGCCCGGTCTCGCGGGCTGGCCCTGCTGCGCGTCGGCCAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTcgc                                                                                                                            >  7:13445/1‑149 (MQ=255)
                   cAGCGGGTGCTCCTGGGTCAGTGCGTGCAACAGTTGCTCGCCCGGTCTCGCGGGCTGGCCCTGCTGCGCGTCGGCCAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTcgc                                                                                                                            <  7:102841/149‑1 (MQ=255)
                    aGCGGGTGCTCCTGGGTCAGTGCGTGCAACAGTTGCTCGCCCGGTCTCGCGGGCTGGCCCTGCTGCGCGTCGGCCAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTcgcg                                                                                                                           >  4:279806/1‑149 (MQ=255)
                       gggTGCTCCTGGGTCAGTGCGTGCAACAGTTGCTCGCCCGGTCTCGCGGGCTGGCCCTGCTGCGCGTCGGCCAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGa                                                                                                                         >  5:64358/1‑148 (MQ=255)
                       gggTGCTCCTGGGTCAGTGCGTGCAACAGTTGCTCGCCCGGTCTCGCGGGCTGGCCCTGCTGCGCGTCGGCCAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGAt                                                                                                                        <  7:81182/149‑1 (MQ=255)
                         gTGCTCCTGGGTCAGTGCGTGCAACAGTTGCTCGCCCGGTCTCGCGGGCTGGCCCTGCTGCGCGTCGGCCAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTa                                                                                                                                   >  8:3017/1‑136 (MQ=255)
                         gTGCTCCTGGGTCAGTGCGTGCAACAGTTGCTCGCCCGGTCTCGCGGGCTGGCCCTGCTGCGCGTCGGCCAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTa                                                                                                                                   <  7:3017/136‑1 (MQ=255)
                         gTGCTCCTGGGTCAGTGCGTGCAACAGTTGCTCGCCCGGTCTCGCGGGCTGGCCCTGCTGCGCGTCGGCCAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATAc                                                                                                                      >  4:126414/1‑149 (MQ=255)
                            cTCCTGGGTCAGTGCGTGCAACAGTTGCTCGCCCGGTCTCGCGGGCTGGCCCTGCTGCGCGTCGGCCAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTg                                                                                                                    <  6:25034/148‑1 (MQ=255)
                              ccTGGGTCAGTGCGTGCAACAGTTGCTCGCCCGGTCTCGCGGGCTGGCCCTGCTGCGCGTCGGCCAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTgcgc                                                                                                                 >  2:35487/1‑149 (MQ=255)
                               cTGGGTCAGTGCGTGCAACAGTTGCTCGCCCGGTCTCGCGGGCTGGCCCTGCTGCGCGTCGGCCAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGcc                                                                                                                >  2:257034/1‑149 (MQ=255)
                                  ggTCAGTGCGTGCAACAGTTGCTCGCCCGGTCTCGCGGGCTGGCCCTGCTGCGCGTCGGCCAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGa                                                                                                             >  7:149655/1‑149 (MQ=255)
                                  ggTCAGTGCGTGCAACAGTTGCTCGCCCGGTCTCGCGGGCTGGCCCTGCTGCGCGTCGGCCAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGa                                                                                                             <  1:205782/149‑1 (MQ=255)
                                          cgtgcAACAGTTGCTCGCCCGGTCTCGCGGGCTGGCCCTGCTGCGCGTCGGCCAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCt                                                                                                      <  8:149655/148‑1 (MQ=255)
                                            tgcAACAGTTGCTCGCCCGGTCTCGCGGGCTGGCCCTGCTGCGCGTCGGCCAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGAc                                                                                                   <  7:214635/149‑1 (MQ=255)
                                             gcAACAGTTGCTCGCCCGGTCTCGCGGGCTGGCCCTGCTGCGCGTCGGCCAAAAGCCAGCCCGCAGCCATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGAc                                                                                                   >  7:303223/1‑148 (MQ=255)
                                              cAACAGTTGCTCGCCCGGTCTCGCGGGCTGGCCCTGCTGCGCGTCGGCCAAATGCCCGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACa                                                                                                  >  4:327007/1‑148 (MQ=255)
                                              cAACAGTTGCTCGCCCGGTCTCGCGGGCTGGCCCTGCTGCGCGTCGGCCAAATGCCCGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACa                                                                                                  >  1:188547/1‑148 (MQ=255)
                                              cAACAGTTGCTCGCCCGGTCTCGCGGGCTGGCCCTGCTGCGCGTCGGCCAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACa                                                                                                  <  4:6631/148‑1 (MQ=255)
                                               aaCAGTTGCTCGCCCGGTCTCGCGGGCTGGCCCTGCTGCGCGTCGGCCAAATGCCAGCCCGCATCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATa                                                                                                <  3:145294/149‑1 (MQ=255)
                                               aaCAGTTGCTCGCCCGGTCTCGCGGGCTGGCCCTGCTGCGCGTCGGCCAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATa                                                                                                <  1:236602/149‑1 (MQ=255)
                                               aaCAGTTGCTAGCACGGTCTCGCGGGCTGGCCCTGCTGCGCGTCGGCAAAATGCCAGCCCGAAGCGATTTGATCTCGCAACTGGCAGATCAGCACCGATGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACAt                                                                                                 <  8:191467/148‑1 (MQ=255)
                                                aCAGTTGCTCGCCCGGTCTCGCGGGCTGGCCCTGCTGCGCGTCGGCCAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATa                                                                                                >  4:273421/1‑148 (MQ=255)
                                                 cAGTTGCTCGCCCGGTCTCGCGGGCTGGCCCTGCTGCGCGTCGGCCAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACa                                                                                              <  8:326028/149‑1 (MQ=255)
                                                 cAGTTGCTCGCCCGGTCTCGCGGGCTGGCCCTGCTGCGCGTCGGCCAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACa                                                                                              <  6:222250/149‑1 (MQ=255)
                                                   gTTGCTCGCCCGGTCTCGCGGGCTGGCCCTGCTGCGCGTCGGCCAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGt                                                                                            <  3:355282/149‑1 (MQ=255)
                                                        tCGCCCGGTCTCGCGGGCTGGCCCTGCTGCGCGTCGGCCAAATGCCAGCCCGCAGCGATGTGATCGCGCATCTGGCCGCTCAGCAACGAGGccgggcgagcaactgttgcacgcactgacccaggagcacccgctgcagccgtgcagcc                                                                                       <  7:339565‑M2/149‑59 (MQ=255)
                                                        tCGCCCGGTCTCGCGGGCTGGCCCTGCTGCGCGTCGGCCAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGccgggcgagcaactgttgcacgcactgacccaggagcacccgctgcagccgttcagcc                                                                                       <  3:275786‑M2/149‑59 (MQ=255)
                                                        tCGCCCGGTCTCGCGGGCTGGCCCTGCTGCGCGTCGGCCAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGTTGGt                                                                                        >  2:194181/1‑148 (MQ=255)
                                                        tCGCCCGGTCTCGCGGGCTGGCCCTGCTGCGCGTCGGCCAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGTTGGt                                                                                        >  3:181769/1‑148 (MQ=255)
                                                            ccGGTCTCGCGGGCTGGCCCTGCTGCGCGTCGGCCAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGccgggcgagcaactgttgcacgcactgacccaggagcacccgctgcagccgttccgccctcg                                                                                   <  6:7072‑M2/149‑63 (MQ=255)
                                                            ccGGTCTCGCGGGCTGGCCCTGCTGCGCGTCGGCCAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGTTGGTCACGt                                                                                   <  1:257034/149‑1 (MQ=255)
                                                                 ctcGCGGGCTGGCCCTGCTGCGCGTCGGCCAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGTTGGTCACGTGCTGa                                                                              <  8:13445/149‑1 (MQ=255)
                                                                  tcGCGGGCTGGCCCTGCTGCGCGTCGGCCAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGa                                                                                                    >  6:170126/1‑126 (MQ=255)
                                                                  tcGCGGGCTGGCCCTGCTGCGCGTCGGCCAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGa                                                                                                    <  5:170126/126‑1 (MQ=255)
                                                                  tcGCGGGCTGGCCCTGCTGCGCGTCGGCCAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGTTGGTCACGTGCTGa                                                                              >  3:370920/1‑148 (MQ=255)
                                                                    gcgGGCTGGCCCTGCTGCGCGTCGGCCAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGTTGGTCACGTGCTGa                                                                              <  3:279806/146‑1 (MQ=255)
                                                                    gcgGGCTGGCCCTGCTGCGCGTCGGCCAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGTTGGTCACGTGCTGACa                                                                            <  7:229785/148‑1 (MQ=255)
                                                                    gcgGGCTGGCCCTGCTGCGCGTCGGCCAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGTTGGTCACGTGCTGACAg                                                                           >  6:58104/1‑149 (MQ=255)
                                                                     cgGGCTGGCCCTGCTGCGCGTCGGCCAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGTTGGTCACGTGCTGACAGt                                                                          <  2:169263/149‑1 (MQ=255)
                                                                      gggCTGGCCCTGCTGCGCGTCGGCCAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGTTGGTCACGTGCTGACAGTa                                                                         <  4:370920/149‑1 (MQ=255)
                                                                        gCTGGCCCTGCTGCGCGTCGGCCAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGTTGGTCACGTGCTGACAGTAgc                                                                       >  2:28381/1‑149 (MQ=255)
                                                                            gCCCTGCTGCGCGTCGGCCAAATGCCAGCCCGCAGCGATGTGATCGGGCAACTGGCCGATCAGCACCGAGGCCGGGGGTTCGCTATTGTCGGGGATACTGCGCCCGACCCAGCTGACATACAGTTGGTCACGTGCTGACAGTAGCGCtt                                                                   <  8:303223/149‑1 (MQ=255)
                                                                              ccTGCTGCGCGTCGGCCAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTAtt                                                                                                                                 <  4:229525/85‑1 (MQ=255)
                                                                              ccTGCTGCGCGTCGGCCAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTAtt                                                                                                                                 >  3:229525/1‑85 (MQ=255)
                                                                              ccTGCTGCGCGTCGGCCAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGTTGGTCACGTGCTGACAGTAGCGCTTc                                                                  >  7:143615/1‑148 (MQ=255)
                                                                               ctgctgCGCGTCGGCAAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGTTGGTCACGTGCTGACAGTAGCGCTTCaa                                                                <  7:275271/149‑1 (MQ=255)
                                                                                  ctgcGCGTCGGCCAAATGCCAGCGCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGTTGGTCACGTGCTGACAGTAGCGCTTCAAg                                                               <  3:56391/147‑1 (MQ=255)
                                                                                  ctgcGCGTCGGCCAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGTTGGTCACGTGCTGACAGTAGCGCTTCAAg                                                               <  4:207335/147‑1 (MQ=255)
                                                                                  ctgcGCGTCGGCCAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGTTGGTCACGTGCTGACAGTAGCGCTTCAAg                                                               <  2:371713/147‑1 (MQ=255)
                                                                                  ctgcGCGTCGGCCAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGTTGGTCACGTGCTGACAGTAGCGCTTCAAGTa                                                             <  7:103101/149‑1 (MQ=255)
                                                                                  ctgcGCGTCGGCCAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGATGGTCACGTGCTGACAGTAGCGCTTCAAGt                                                              <  1:35487/148‑1 (MQ=255)
                                                                                     cgcgTCGGCCAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGTTGGTCACGTGCTGACAGTAGCGCTTCAAGTAACa                                                          <  3:126414/149‑1 (MQ=255)
                                                                                      gcgTCGGCCAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGTTGGTCACGTGCTGACAGTAGCGCTTCAAGTAACAg                                                         <  3:350446/149‑1 (MQ=255)
                                                                                      gcgTCGGCCAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGTTGGTCACGTGCTGACAGTAGCGCTTCAAGTAACAg                                                         <  3:273421/149‑1 (MQ=255)
                                                                                           ggCCAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGTTGGTCACGTGCTGACAGTAGCGCTTCAAGTAACAGGTAAc                                                    >  8:174358/1‑149 (MQ=255)
                                                                                              cAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGTTGGTCACGTGCTGACAGTAGCGCTTCAAGTAACAGGTAACGgt                                                 >  7:127360/1‑149 (MQ=255)
                                                                                              cAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGTTGGTCACGTGCTGACAGTAGCGCTTCAAGTAACAGGTAACGgt                                                 >  3:12902/1‑149 (MQ=255)
                                                                                                  tGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGTTGGTCACGTGCTGACAGTAGCGCTTCAAGTAACAGGTAACGgtcgtc                                             <  2:188547/149‑1 (MQ=255)
                                                                                                    ccAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGccgggcgagcaactgttgcacgcactgacccaggagcacccgctgcagccgttcagccctcggtacttccagaagggcagcccactgttcagctatgcccat                                           >  4:275786‑M2/1‑47 (MQ=255)
                                                                                                    ccAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGTTGGTCACGTGCTGACAGTAGCGCTTCAAg                                                               <  6:33749/129‑1 (MQ=255)
                                                                                                    ccAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGTTGGTCACGTGCTGACAGTAGCGCTTCAAg                                                               >  5:33749/1‑129 (MQ=255)
                                                                                                     cAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGTTGGTCACGTGCt                                                                                >  7:257168/1‑111 (MQ=255)
                                                                                                     cAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGTTGGTCACGTGCt                                                                                <  8:257168/111‑1 (MQ=255)
                                                                                                     cAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGTTGGTCACGTGCTGACAGTAGCGCTTCAAGTAACAGGTAACGGTCGTCTTc                                          >  3:66774/1‑149 (MQ=255)
                                                                                                        cccGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGTTGGTCACGTGCTGACAGTAGCGCTTCAAGTAACAGGTAACGGTCGTCTTcgcg                                       >  1:236963/1‑149 (MQ=255)
                                                                                                         ccGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGTTGGTCACGTGCTGACAGTAGCGCTTCAAGTAACAGGTAACGGTCGTCTTCgcgg                                      <  3:327007/149‑1 (MQ=255)
                                                                                                         ccGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGTTGGTCACGTGCTGACAGTAGCGCTTCAAGTAACAGGTAACGGTCGTCTTCgcgg                                      >  2:36555/1‑149 (MQ=255)
                                                                                                          cGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTg                                                                                                                                >  2:121908/1‑58 (MQ=255)
                                                                                                          cGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTg                                                                                                                                <  1:121908/58‑1 (MQ=255)
                                                                                                            cAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGTTGGTCACGTGCTGACAGTAGCGCTTCAAGTAACAGGTAACGGTCGTCTTCGCGGCGt                                   >  6:135999/1‑149 (MQ=255)
                                                                                                              gCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGccgggcgagcaactgttgcacgcactgacccaggagcacccgctgcagccgttcagccctcggtacttccagaagggcagcccactgttcagctatgcccatgaatggcagg                                 >  8:339565‑M2/1‑37 (MQ=255)
                                                                                                              gCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGTTGGTCACGTGCTGACAGTAGCGCTTCAAGTAACAGGTAACGGTCGTCTTCGCGGCGTGa                                 <  5:135999/149‑1 (MQ=255)
                                                                                                                    tgATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGTTGGTCACGTGCTGACAGTAGCGCTTCAAGTAACAGGTAACGGTCGTCTTCGCGGCGTGAGCGGTc                           <  4:66774/149‑1 (MQ=255)
                                                                                                                         gcgcAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGTTGGTCACGTGCTGACAGTAGCGCTTCAAGTAACAGGTAACGGTCGTCTTCGCGGCGTGAGCGGTCGCCgg                      >  4:134612/1‑149 (MQ=255)
                                                                                                                          cgcAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGTTGGTCACGTGCTGACAGTAGCGCTTCAAGTAACAGGTAACGGTCGTCTTCGCGGCGTGAGCGGTCGCCggg                     >  5:141199/1‑149 (MQ=255)
                                                                                                                           gcAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGTTGGTCACGTGCTGACAGTAGCGCTTCAAGTAACAGGTAACGGTCGTCTTCGCGGCGTGAGCGGTCGCCgggg                    >  3:149478/1‑149 (MQ=255)
                                                                                                                           gcAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGTTGGTCACGTGCTGACAGTAGCGCTTCAAGTAACAGGTAACGGTCGTCTTCGCGGCGTGAGCGGTCGCCgggg                    <  8:127360/149‑1 (MQ=255)
                                                                                                                           gcAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGTTGGTCACGTGCTGACAGTAGCGCTTCAAGTAACAGGTAACGGTCGTCTTCGCGGCGTGAGCGGTCGCCgggg                    <  1:28381/149‑1 (MQ=255)
                                                                                                                            cAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGTTGGTCACGTGCTGACAGTAGCGCTTCAAGTAACAGGTAACGGTCGTCTTCGCGGCGTGAGCGGTCGCCGGGGc                   <  1:194181/149‑1 (MQ=255)
                                                                                                                              aCTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGTTGGTCACGTGCTGACAGTAGCGCTTCAAGTAACAGGTAACGGTCGTCTTCGCGGCGTGAGCGGTCGCCGGGGCGa                 <  8:143615/149‑1 (MQ=255)
                                                                                                                                tGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCTGACCCAGCTGACATACAGTTGGTCACGTGCTGACAGTAGCGCTTCAAGTAACAGGTAACGGTCGTCTTCGCGGCGTGAGCGGTCGCCGGGGCGa                 >  6:343044/1‑147 (MQ=255)
                                                                                                                                  gCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGTTGGTCACGTGCTGACAGTAGCGCTTCAAGTAACAGGTAACGGTCGTCTTCGCGGCGt                                   >  5:168657/1‑127 (MQ=255)
                                                                                                                                  gCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGTTGGTCACGTGCTGACAGTAGCGCTTCAAGTAACAGGTAACGGTCGTCTTCGCGGCGt                                   <  6:168657/127‑1 (MQ=255)
                                                                                                                                   ccGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGTTGGTCACGTGCTGACAGTAGCGCTTCAAGTAACAGGTAACGGTCGTCTTCGCGGCGTGAGCGGTCGCCGGGGCGATAGTc            <  8:120019/149‑1 (MQ=255)
                                                                                                                                    cGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGTTGGTCACGTGCTGACAGTAGCGCTTCAAGTAACAGGTAACGGTCGTCTTCGCGGCGTGAGCGGTCGCCGGGGCGATAGTCg           >  2:208665/1‑149 (MQ=255)
                                                                                                                                       tCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGCCCCAGCTGACATACAGTTGGTCACGTGCTGACAGTAGCGCTTCAAGTAACAGGTAACGGTCGTCTTCGCGGCGTGAGCGGTCGCCGGGGCGATAGTCGCTg        >  5:383433/1‑149 (MQ=255)
                                                                                                                                       tCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGTTGGTCACGTGCTGACAGTAGCGCTTCAAGTAACAGGTTACGGTCGTCTTCGCGGCGTGAGCGGTCGCCGGGGCGATAGTCGCTg        <  1:84960/149‑1 (MQ=255)
                                                                                                                                       tCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGTTGGTCACGTGCTGACAGTAGCGCTTCAAGTAACAGGTAACGGTCGTCTTCGCGGCGTGAGCGGTCGCCGGGGCGATAGTCGCTg        <  4:12902/149‑1 (MQ=255)
                                                                                                                                             ccGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGTTGGTCACGTGCTGACAGTAGCGCTTCAAGTAACAGTTAACGGTCGTCTTCGCGGCGTGAGCGGTCGCCGGGGCGATAGTCGCTGGCCAt   >  6:364737/1‑148 (MQ=255)
                                                                                                                                             ccGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGTTGGTCACGTGCTGACAGTAGCGCTTCAAGTAACAGGTAACGGTCGTCTTCGCGGCGTGAGCGGTCGCCGGGGCGATAGTCGCTGGCCATc  <  6:64358/149‑1 (MQ=255)
                                                                                                                                             ccGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGTTGGTCACGTGCTGACAGTAGCGCTTCAAGTAACAGGTAACGGTCGTCTTCGCGGCGTGAGCGGTCGCCGGGGCGATAGTCGCTGGCCATc  <  8:305678/149‑1 (MQ=255)
                                                                                                                                             ccGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGTTGGTCACGTGCTGACAGTAGCGCTTCAAGTAACAGGTAACGGTCGTCTTCGCGGCGTGAGCGGTCGCCGGGGCGATAGTCGCTGGCCATc  <  3:124962/149‑1 (MQ=255)
                                                                                                                                             ccGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGTTGGTCACGTGCTGACAGTAGCGCTTCAAGTAACAGGTAACGGTCGTCTTCGCGGCGTGAGCGGTCACCGGGGCGATAGTCGCTGGCCATc  <  4:181769/149‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                               
ACCGAGGGCTGAACGGCTGCAGCGGGTGCTCCTGGGTCAGTGCGTGCAACAGTTGCTCGCCCGGTCTCGCGGGCTGGCCCTGCTGCGCGTCGGCCAAATGCCAGCCCGCAGCGATGTGATCGCGCAACTGGCCGATCAGCACCGAGGCCGGGCGTTCGCTATTGTCGCGGATACTGCGCCCGACCCAGCTGACATACAGTTGGTCACGTGCTGACAGTAGCGCTTCAAGTAACAGGTAACGGTCGTCTTCGCGGCGTGAGCGGTCGCCGGGGCGATAGTCGCTGGCCATC  >  NC_002947/5304824‑5305113

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.