New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5594092 =43 (0.710)7 (0.150) 6/208 NT 18.2% intergenic (‑39/+106) PP_4921/thiC NCS1 family transporter/phosphomethylpyrimidine synthase
?NC_002947 5594185 = 29 (0.610)intergenic (‑132/+13) PP_4921/thiC NCS1 family transporter/phosphomethylpyrimidine synthase

GCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCGTCACATCCACGGCCTCGATCTTGGCAGCGTACTCACGCACTTCCTGGGTGATCTTCATC  >  NC_002947/5594039‑5594330
                                                                                                                                                   |                                                                                                                                                  
gctggGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCCGCCAAGCCCGTGCCATGAACCGCAGTGCTTGCTTAGCCGGCAAGCCCGCTCCCACAGCGTAAg                                                                                                                                                  >  8:69621/1‑149 (MQ=37)
      tGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACAACGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTAGCGGGCAAGCCCGCTCCCACAGGGTAAGGtgctg                                                                                                                                            >  3:349297/1‑149 (MQ=255)
       gagggcatggtcatgTCCGCAGGAGTGAGGTTAAGGGGCATACCCCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGGGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGtgctgc                                                                                                                                           <  7:63241/144‑1 (MQ=25)
             ttggtcatgTCCGCTGGAGTTTTGTTAAGGGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCTAACACCGGCAAAGCGGGTGCCTTGCACCGCAGTGCTTGCTTGGCGGCCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTa                                                                                                                                    <  4:349297/148‑1 (MQ=25)
              tggtcatgTCCGCAGGAGTGATGATAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGCACACCGGCAAAACCGGTGCCAAGCACCCCAGTGCTTGCTTAGCGGGCAAGCCCCCACCCACAGGGGAAGGTGCTGCgggt                                                                                                                                       >  3:357163/1‑144 (MQ=37)
                 tcatgTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCCTGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCCCAGGGTAAGGTGCTGCGGTTTAGACt                                                                                                                                >  7:280827/1‑149 (MQ=255)
                   atgTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACAAAGGCAAAGCCCGTGCCATTCACCGCACTGCTTGCTTCGCGGGCAATCCCGCACCCACACGGTAAGGTGCTGCGGTTTAGACttt                                                                                                                              >  1:12899/1‑149 (MQ=37)
                      tCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACCCCGGCAAAGCCGGTGCCATGCCCCGCCGTGCTTGCTTCGCGGGCCAGCCCGCTCCCCCAGGGGAAGGGGCTGCGGTTGTGACGTtgtg                                                                                                                           >  4:207286/1‑149 (MQ=25)
                      gccGCAGGAGTCATGGTACGGGCCATCCACCACCCTGGGGGAGCGGGCTTCCCCGCGAACACCGGCAAAGCCGGTGCCATGCCCCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTtgt                                                                                                                            <  2:259365/147‑1 (MQ=25)
                       ccGCAGGAGTGATGTTAAGTGGCATACACCACCCTGGGGGAGGGGGCTTGCCCGCTAACACCGGCAAAGCCGGTGCCATGGACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTtgtg                                                                                                                           <  7:69621/148‑1 (MQ=255)
                        cGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTAGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTgg                                                                                                                          >  4:262580/1‑148 (MQ=255)
                           aGGAGTTAGGTTACGGGCCATACACCACCCTGTGGGAGCGGGCTTGCCCGCTAACACCGGCAACGCCGGTGCCATGCACCGCAGGGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACa                                                                                                                      <  5:6943/149‑1 (MQ=25)
                                   ttatAAGTGGCATACACCACCCTGGGGGAGCGGGCTGGCCCGCTAACACCGGCAAAGCGGGTGCAATGCACCGCTGTGCTTGCTTCGCGGGAAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAgctggct                                                                                                               <  4:357163/145‑1 (MQ=255)
                                   tGTTAAGTGGCATACACCACCGTGGGGGAGCGGGCTGGCCCGCTAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAgctggct                                                                                                               <  7:135985/148‑1 (MQ=255)
                                       aaGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCt                                                                                                           >  8:63298/1‑148 (MQ=255)
                                            gCATACACCACCCTGTGGGAGCGGGCTTGGCCGCGAACACCGGCAAAGCCGGTGGCCATGCACCACAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGGTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTcc                                                                                                        >  1:288462/1‑147 (MQ=37)
                                            gCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACCCCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTgg                                                                                                     >  5:68424/1‑149 (MQ=255)
                                              aTACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGGAAGCCCGCTCCCACAGGGGAAGGTGCTGCGGTTTAGACTTTGTGGTACAg                                                                                                                     >  3:60283/1‑131 (MQ=255)
                                                     ACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGc                                                                                            >  7:63298‑M1/1‑149 (MQ=255)
                                                          tgtgggagcgggcttgcccgcgaagcaagccctgcggtgcatggcaccggctttgccggtgttagcgggcaagcccgctaccacagggtAAGGTGCTGGGGGTTAGACGTTGTGGTTCAGCTGGCTTCCTTCCTGGCGGAACCGCTCgg                                                                                        >  8:82922‑M2/90‑149 (MQ=255)
                                                                  GGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTc                                                                                 >  1:129596‑M1/1‑147 (MQ=255)
                                                                  GGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTc                                                                                 <  2:129596‑M1/147‑1 (MQ=255)
                                                                    GCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCAc                                                                               <  4:76556‑M1/147‑1 (MQ=255)
                                                                    GCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCAc                                                                               >  3:76556‑M1/1‑147 (MQ=255)
                                                                     gcttgcccgcgaagcaagcactgcggtgcatggcaccggctttgccggtgttcgcgggcaagcccgctcccacagggtAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACg                                                                              >  6:278917‑M2/79‑148 (MQ=255)
                                                                        GCCCGTGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATg                                                                          >  8:152385‑M1/1‑148 (MQ=255)
                                                                         gcccgcgaagcaagcactgcggtgcatggcaccggctttgccggtgttcgcgggcaagcccgctcccacagggtAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGc                                                                         >  2:283294‑M2/75‑149 (MQ=255)
                                                                          CCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCt                                                                       <  5:263204‑M1/149‑1 (MQ=255)
                                                                           ccgcgaagcaagcactgcggtgcatggcaccggctttgccggtgttcgcgggcaagcccgctcccacagggtAAGGTGCTGCGGTTTa                                                                                                                                    >  3:223179‑M2/73‑88 (MQ=255)
                                                                           ccgcgaagcaagcactgcggtgcatggcaccggctttgccggtgttcgcgggcaagcccgctcccacagggtAAGGTGCTGCGGTTTa                                                                                                                                    <  4:223179‑M2/16‑1 (MQ=255)
                                                                           ccgcgaagcaagcactgcggtgcatggcaccggctttgccggtgttcgcgggcaagcccgctcccacagggtAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCt                                                                       >  5:130502‑M2/73‑149 (MQ=255)
                                                                           CGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGc                                                                             >  2:333924‑M1/1‑142 (MQ=255)
                                                                           CGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGc                                                                             <  1:333924‑M1/142‑1 (MQ=255)
                                                                            GCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTg                                                                     <  5:135369‑M1/149‑1 (MQ=255)
                                                                             gcgaagcaagcactgcggtgcatggcaccggctttgccggtgttcgcgggcaagcccgctcccacagggtAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTg                                                                     >  4:37113‑M2/71‑149 (MQ=255)
                                                                               ggcacCGGCTTTGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTc                                                                  >  1:294629/3‑149 (MQ=255)
                                                                                 cacCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGa                                                                >  3:215655/1‑149 (MQ=255)
                                                                                   ccGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGAcc                                                              >  8:130658/1‑149 (MQ=255)
                                                                                    tggCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCg                                                             >  2:236187/2‑149 (MQ=255)
                                                                                      gCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCGt                                                            >  6:228075/1‑148 (MQ=255)
                                                                                                      tGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCGTCACATCCACGGCCTc                                             >  6:334500/1‑148 (MQ=255)
                                                                                                       gCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGCCCGTCACATCCACGGCCTCGa                                           >  7:140473/1‑149 (MQ=255)
                                                                                                           cGCAGTGCTGGCTTCGCGGCCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCGTCACATCCACGGCCTCGATCtt                                       <  1:374883/149‑1 (MQ=255)
                                                                                                            gCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCGTCACATCCACGGCCTCGATCTTg                                      <  3:262580/149‑1 (MQ=255)
                                                                                                             cAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCGTCACATCCACGGCCt                                              >  1:195265/1‑140 (MQ=255)
                                                                                                             cAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCGTCACATCCACGGCCt                                              <  2:195265/140‑1 (MQ=255)
                                                                                                                tgcttgctTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTATTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCGTCACATCCACGGCCTCGATCTTgg                                     >  1:279166/1‑147 (MQ=255)
                                                                                                                  cttgcttCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCt                                                                       <  4:185837/110‑1 (MQ=255)
                                                                                                                  cttgcttCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGAGGAACCGCTCGGCCTGCTCACGCATGACTTGCTCGACCGTCACATCCACGGCATCGATCATGGCAgac                                >  8:326962/1‑147 (MQ=255)
                                                                                                                    tgcttCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCGTCACATCCACGGCCTCGATCTTGGCAGCgct                              >  3:29661/1‑147 (MQ=255)
                                                                                                                     gcttCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCGTCACATCCACGGCCTCGATCTTGGCAGCGTAc                             >  3:196277/1‑149 (MQ=255)
                                                                                                                         cgcgggcaagcccgctcccacagggtAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCGTCACATCCAc                                                   <  4:331478‑M2/97‑1 (MQ=255)
                                                                                                                         cgcgggcaagcccgctcccacagggtAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCGTCACATCCACGGCCTCGATCTTGGCAGCGTACTCAc                         >  2:118266‑M2/27‑149 (MQ=255)
                                                                                                                                  gcccgctcccacagggtAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCGTCACATCCACGGCCTCGATCTTGGCAGCGTACTCACGCACTTCCt                >  3:155137‑M2/18‑149 (MQ=255)
                                                                                                                                  gcccgctcccacagggtAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCGTCACATCCACGGCCTCGATCTTGGCAGCGTACTCACGCACTTCCt                <  5:278917‑M2/132‑1 (MQ=255)
                                                                                                                                   cccgctcccacatggtAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCGTCACATCCACGGCCTCGATCTTGGCAGCGTACTCACGCACTTCCTg               <  2:12899‑M2/133‑1 (MQ=255)
                                                                                                                                   cccgctcccacagggtAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCGTCACATCCACGGCCTCGATCTTGGCAGCGTACTCACGCACTTCCTg               >  6:175297‑M2/17‑149 (MQ=255)
                                                                                                                                   cccgctcccacagggtAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCGTCACATCCACGGCCTCGATCTTGGCAGCGTACTCACGCACTTCCTg               >  3:103560‑M2/17‑149 (MQ=255)
                                                                                                                                    ccgctcccacagggtAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCGTCACATCCACGGCCTCGATCTTGGCAGCGTACTCACGCACTTCCTgg              <  7:130658‑M2/134‑1 (MQ=255)
                                                                                                                                    ccgctcccacagggtAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCGTCACATCCACGGCCTCGATCTTGGCAGCGTACTCACGCACTTCCTgg              >  3:229482‑M2/16‑149 (MQ=255)
                                                                                                                                      gctcccacagggtAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCGTCACATCCACGGCCTCGATCTTGGCAGCGTACTCACGCACTTCCTGGGt            >  5:34501‑M2/14‑149 (MQ=255)
                                                                                                                                      gctcccacagggtAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCGTCACATCCACGGCCTCGATCTTGGCAGCGTACTCACGCACTTCCTGGGt            >  3:12405‑M2/14‑149 (MQ=255)
                                                                                                                                       ctcccacagggtAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCGTCACATCCACGGCCTCGATCTTGGCAGCGTACTCACGCACTTCCTGGGTg           <  7:326962‑M2/137‑1 (MQ=255)
                                                                                                                                          ccacagggtAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCGTCACATCCACGGCCTCGATCTTGGCAGCGTACTCACGCACTTCCTGGGTGa          <  4:229482‑M2/138‑1 (MQ=255)
                                                                                                                                          ccacagggtAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCGTCACATCCACGGCCTCGATCTTGGCAGCGTACTCACGCACTTCCTGGGTGATc        >  1:380521‑M2/10‑149 (MQ=255)
                                                                                                                                          ccacagggtAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCGTCACATCCACGGCCTCGATCTTGGCAGCGTACTCACGCACTTCCTGGGTGATc        <  4:196277‑M2/140‑1 (MQ=255)
                                                                                                                                           cacagggtAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCGTCACATCCACGGCCTCGATCTTGGCAGCGTACTCACGCACTTCCTGGGTGATCt       >  8:128375‑M2/9‑149 (MQ=255)
                                                                                                                                           cacagggtAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCGTCACATCCACGGCCTCGATCTTGGCAGCGTACTCACGCACTTCCTGGGTGATCt       <  3:37113‑M2/141‑1 (MQ=255)
                                                                                                                                            acagggtAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCGTCACATCCACGGCCTCGATCTTGGCAGCGTACTCACGCACTTCCTGGGTGATCtt      >  7:141762‑M2/8‑149 (MQ=255)
                                                                                                                                            acagggtAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCGTCACATCCACGGCCTCGATCTTGGCAGCGTACTCACGCACTTCCTGGGTGATCtt      <  8:280827‑M2/142‑1 (MQ=255)
                                                                                                                                             cagggtAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCGTCACATCCACGGCCTCGATCTTGGCAGCGTACTCACGCACTTCCTGGGTGATCtt      >  5:118103‑M2/7‑148 (MQ=255)
                                                                                                                                              agggtAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCGTCACATCCACGGCCTCGATCTTGGCAGCGTACTCACGCACTTCCTGGGTGATCTTCa    <  1:236187‑M2/144‑1 (MQ=255)
                                                                                                                                                ggtAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCGTCACATCCACGGCCTCGATCTTGGCAGCGTACTCACGCACTTCCTGGGTGATCTTCATc  <  6:68424‑M2/146‑1 (MQ=255)
                                                                                                                                                ggtAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTCGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCGTCACATCCACGGCCTCGATCTTGGCAGCGTACTCACGCACTTCCTGGGTGATCTTCATc  <  2:288462‑M2/146‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
GCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCGTCACATCCACGGCCTCGATCTTGGCAGCGTACTCACGCACTTCCTGGGTGATCTTCATC  >  NC_002947/5594039‑5594330

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.