| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3383565 | 43 (1.260) | 31 (0.910) | 28/290 | 0.3 | 58.5% | coding (501/546 nt) | PP_2985 | hypothetical protein |
| ? | NC_002947 | = 4950858 | 1 (0.030) | intergenic (‑8/+149) | fliL/fliK | flagellar protein FliL/flagellar hook‑length control protein FliK | |||||
ATCGCATAGATCAAACCTTCCTCAATGGATGGCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGCTCGACTCCAACTGAAGCTTCAGCGTTTCATACTGTTGGCGGATCGAGGCATCGCGCCTGAGCAAATCTCTG > NC_002947/3383418‑3383712 | atCGCATAGATCAAACCTTCCTCAATGGATGGCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGAcccc < 3:2756/148‑1 (MQ=255)atCGCATAGATCAAACCTTCCTCAATGGATGGCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGAcccc < 2:167571/148‑1 (MQ=255) aTAGATCAAACCTTCCTCAATGGATGGCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCttatt < 2:158226‑M1/148‑6 (MQ=255) tAGATCAAACCTTCCTCAATGGATGGCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTTCTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCttattg > 3:71638‑M1/1‑142 (MQ=255) aaCCTTCCTCAATGGATGGCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGa < 8:17185/147‑1 (MQ=255) cTTCCTCAATGGATGGCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCttattggcatggcgaa < 4:177323‑M1/148‑17 (MQ=255) cTTCCTCAATGGATGGCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCttattggcatggc > 2:190081‑M1/1‑132 (MQ=255) ttCCTCAATGGATGGCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAagcag < 5:40524/148‑1 (MQ=255) ttCCTCAATGGATGGCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAagcag > 8:102474/1‑148 (MQ=255) tCAATGGATGGCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCttattggcatggcgaagagc < 4:69934‑M1/147‑21 (MQ=255) tCAATGGATGGCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCt > 2:49948/1‑148 (MQ=255) aaTGGATGGCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTg > 4:23200/1‑147 (MQ=255) atggatggCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCttattggcatggcgaagagcgaa < 5:121723‑M1/147‑24 (MQ=255) atggatggCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCttattggcatggcgaagagcgaa < 6:79174‑M1/147‑24 (MQ=255) atggatggCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCttattggcatggcgaagagcgaa < 7:180065‑M1/147‑24 (MQ=255) tggatggCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGa < 3:151481/148‑1 (MQ=255) atggCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATa < 8:21603/147‑1 (MQ=255) cTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGaa < 3:66710/148‑1 (MQ=255) tGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTATGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGaaa > 3:143098/1‑148 (MQ=255) aaGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCttattggcatggcgaagagcgaagcagtcaaagac > 1:18805‑M1/1‑113 (MQ=255) aaGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCa > 7:68723/1‑122 (MQ=255) aGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCAt < 8:68723/122‑1 (MQ=255) tGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCttattggcatggcgaagagcgaagcagtcaaagaccccgcca < 1:25511‑M1/148‑43 (MQ=255) ggCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCttttt > 2:89430/1‑148 (MQ=255) gcgAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCTTGACCCCttattggcatggcgaagagcgaggcagtcaaagaccccgccactaaa < 7:128999‑M1/148‑48 (MQ=255) gTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCttattggcatggcgaagagcgaagcagtcaaagaccccgccactaaaggcaaac > 2:4538‑M1/1‑93 (MQ=255) cTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCa < 1:110809/148‑1 (MQ=255) gCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCa < 1:156526/148‑1 (MQ=255) gggCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCAccc < 6:109309/148‑1 (MQ=255) tgcTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCttattggcatggcgaagagcgaagcagtcaaagaccccgccactaaaggcaaactcaagctgatcctgct < 1:4538‑M1/147‑71 (MQ=255) tAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCttattggcatggcgaagagcgaagcagtcaaagaccccgccactaaaggcaaactcaagctgatcctgctggctgt > 2:42126‑M1/1‑72 (MQ=255) tAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGc > 7:41625/1‑148 (MQ=255) tAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGc > 3:38210/1‑148 (MQ=255) tAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGc > 5:5430/1‑148 (MQ=255) aTCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCttattggcatggcgaagagcgaagcagtcaaagaccccgccactaaaggcaaactcaagctgatcctgctggctgtcg > 4:97423‑M1/1‑70 (MQ=255) tACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGCTCGAc > 3:107539/1‑148 (MQ=255) tCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGCTCGAc < 5:106970/145‑1 (MQ=255) tCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGCTCGAc < 4:49368/145‑1 (MQ=255) tttAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCttattggcatggcgaagagcgaagcagtcaaagaccccgccactaaaggcaaactcaagctgatcctgctggctgtcgtcggcctgt < 7:108720‑M1/148‑88 (MQ=255) aTACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCttattggcatggcgaagagcgaagcagtcaaagaccccgccactaaaggcaaactcaagctgatcctgctggctgtcgtcggcctgttgctg > 7:175893‑M1/1‑56 (MQ=255) aTACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGCTCGACTCCAACTGaa < 1:82/147‑1 (MQ=255) aTACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGCTCGACTCCAACTGaa < 4:107539/147‑1 (MQ=255) aTACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGCTCGACTCCAACTGaa < 4:29089/147‑1 (MQ=255) tACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCttattggcatggcgaagagcgaagcagtcaaagaccccgccactaaaggcaaactcaagctgatcctgctggctgtcgtcggcctgttgctgg < 2:18805‑M1/148‑94 (MQ=255) tACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGCTCGACTCCAACTGAAGc < 1:49948/148‑1 (MQ=255) aaTAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCttattggcatggcgaagagcgaagcagtcaaagaccccgccactaaaggcaaactcaagctgatcctgctggctgtcgtcggcctgttgctggcga > 5:44734‑M1/1‑52 (MQ=255) aTAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGCTCGACTCCAACTGAAGCTTCa < 6:51544/148‑1 (MQ=255) aTAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGCTCGACTCCAACTGAAGCTTCa < 5:172709/148‑1 (MQ=255) tAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCttattggcatggcgaagagcgaagcagtcaaagaccccgccactaaaggcaaactcaagctgatcctgctggctgtcgtcggcctgttgctggcgatc > 4:93401‑M1/1‑50 (MQ=255) cTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCttattggcatggcgaagagcgaagcagtcaaagaccccgccactaaaggcaaactcaagctgatcctgctggctgtcgtcggcctgttgctggcgatcggc > 8:151391‑M1/1‑47 (MQ=255) agagAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGCTCGACTCCAACTGAAGCTTCAGCGTTTc > 4:124028/1‑148 (MQ=255) gaACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGCTCGACTCCAACTGAAGCTTCAGCGTTTCATa < 7:92275/148‑1 (MQ=255) cGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCttattggcatggcgaagagcgaagcaggcaaagaccccgccactaaaggcaaactcaagctgatcctgctggctgtcgtcggcctgttgctggcgatcggcctttcggtg < 5:60768‑M1/148‑111 (MQ=255) gAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCttattggcatggcgaagagcgaagcagtcaaagaccccgccactaaaggcaaactcaagctgatcctgctggctgtcgtcggcctgttgctggcgatcggcctttcggtgg < 8:175893‑M1/148‑112 (MQ=255) gAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGCTCGACTCCAACTGAAGCTTCAGCGTTTCATACTGt > 3:6077/1‑148 (MQ=255) aTGTCCTAATTTTTGCCTTATCTCGGCATGACCCCttattggcatggcgaagagcgaagcagtcaaagaccccgccactaaaggcaaactcaagctgatcctgctggctgtcgtcggcctgttgctggcgatcggcctttcggtgggc < 2:177327‑M1/148‑114 (MQ=255) tCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGCTCGACTCCAACTGAAGCTTCAGCGTTTCATACTGTTGGc > 5:103610/1‑147 (MQ=255) cTAATTTTTGCCTTATCTCGGCATGACCCCttattggcatggcgaagagcgaagcagtcaaagaccccgccactaaaggcaaactcaagctgatcctgctggctgtcgtcggcctgttgctggcgatcggcctttcggtgggcgctac > 2:32516‑M1/1‑30 (MQ=255) tAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGCTCGACTCCAACTGAAGCTTCAGCGTTTCATACTGTTGGCGGAt > 4:146630/1‑148 (MQ=255) tAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGCTCGACTCCAACTGAAGCTTCAGCGTTTCATACTGTTGGCGGAt > 3:119454/1‑148 (MQ=255) aTTTTTGCCTTATCTCGGCATGACCCCttattggcatggcgaagagcgaagcagtcaaagaccccgccactaaaggcaaactcaagctgatcctgctggctgtcgtcggcctgttgctggcgatcggcctttcggtgggcgctacctg > 8:20767‑M1/1‑27 (MQ=255) ttttGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAACGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGCTCGACTCCAACTGAAGCTTCAGCGTTTCATACTGTTGCCGGATCGAg < 6:111513/148‑1 (MQ=255) tGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGCTCGACTCCAACTGAAGCTTCAGCGTTTCATACTGTTGGCGGATCGAGGCa > 6:86720/1‑148 (MQ=255) ccTTATCTCGGCATGACCCCttattggcatggcgaagagcgacgcagtcaaagaccccgccactaaaggcaaactcaagctgatcctgctggctgtcgtcggcctgttgctggcgatcggcctttcggtgggcgctacctggttcat < 4:59510‑M1/147‑128 (MQ=255) ttATCTCGGCATGACCCCttattggcatggcgaagagcgaagcagtcaaagaccccgccactaaaggcaaactcaagctgatcctgctggctgtcgtcggcctgttgctggcgatcggcctttcggtgggcgctacctggttcatcat < 4:93007‑M1/148‑131 (MQ=255) ttATCTCGGCATGACCCCttattggcatggcgaagagcgaagcagtcaaagaccccgccactaaaggcaaactcaagctgatcctgctggctgtcgtcggcctgttgctggcgatcggcctttcggtgggcgctacctggttcatcat < 4:90066‑M1/148‑131 (MQ=255) ttATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGCTCGACTCCAACTGAAGCTTCAGCGTTTCATACTGTTGGCGGATCGAGGCATcgc > 1:40017/1‑148 (MQ=255) gCATGACCCCttattggcatggcgaagagcgaagcagtcaaagaccccgccactaaaggcaaactcaagctgatcctgctggctgtcgtcggcctgttgctggcgatcggcctttcggtgggcgctacctggttcatcatgcac < 3:97423‑M1/144‑135 (MQ=255) gCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGCTCGACTCCAACTGAAGCTTCAGCGTTTCATACTGTTGGCGGATCGAGGCATCGCGCCTGAg > 6:6631/1‑147 (MQ=255) gCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGCTCGACTCCAACTGAAGCTTCAGCGTTTCATACTGTTGGCGGATCGAGGCATCGCGCCTGAg > 1:12569/1‑147 (MQ=255) gCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGCTCGACTCCAACTGAAGCTTCAGCGTTTCATACTGTTGGCGGATCGAGGCATCGCGCCTGAGc < 2:40017/148‑1 (MQ=255) gACCCCttattggcatggcgaagagcgaagcagtcaaagaccccgccactaaaggcaaactcaagctgatcctgctggctgtcgtcggcctgttgctggcgatcggcctttcggtgggcgctacctggttcatcatgcacaagagcga < 2:5511‑M1/148‑143 (MQ=255) ccccATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGCTCGACTCCAACTGAAGCTTCAGCGTTTCATACTGTTGGCGGATCGAGGCATCGCGCCTGAg > 2:109444/1‑141 (MQ=255) cccATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGCTCGCCTCCAACTGAAGCTTCAGCGTTTCATACTGTAGGCGGATCGAGGCATCGCGCCTGAGCAAAtctc > 3:123214/1‑148 (MQ=255) cccATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGCTCGACTCCAACTGAAGCTTCAGCGTTTCATACTGTTGGCGGATCGAGGCATCGCGCCTGAGc < 1:109444/141‑1 (MQ=255) cATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGCTCGACTCCAACTGAAGCTTCAGCGTTTCATACTGTTGGCGGATCGAGGCATCGCGCCTGAGCAAATCTCTg < 3:146630/148‑1 (MQ=255) | ATCGCATAGATCAAACCTTCCTCAATGGATGGCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCATACCGGCATGAAGCAGCGCTGCGATAATGAAAGGAGCCTTTTTCTCTAGATACTCAGCCATCCCACCCGTATTGCTCGACTCCAACTGAAGCTTCAGCGTTTCATACTGTTGGCGGATCGAGGCATCGCGCCTGAGCAAATCTCTG > NC_002947/3383418‑3383712 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |